Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4020

Experiment: D-Alanine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntPfGW456L13_4019 and PfGW456L13_4020 are separated by 66 nucleotidesPfGW456L13_4020 and PfGW456L13_4021 overlap by 8 nucleotides PfGW456L13_4019 - Lipoprotein releasing system transmembrane protein LolE, at 4,507,788 to 4,509,032 _4019 PfGW456L13_4020 - Lipoprotein releasing system ATP-binding protein LolD, at 4,509,099 to 4,509,797 _4020 PfGW456L13_4021 - Lipoprotein releasing system transmembrane protein LolC, at 4,509,790 to 4,510,974 _4021 Position (kb) 4509 4510Strain fitness (log2 ratio) -2 -1 0 1at 4509.050 kb on - strandat 4509.056 kb on - strandat 4509.101 kb on - strandat 4509.798 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Alanine (C)
remove
4,509,050 - -1.8
4,509,056 - -0.6
4,509,101 - -0.3
4,509,798 - +0.8

Or see this region's nucleotide sequence