Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2597

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
2,884,132	+		PfGW456L13_2596	0.12	+0.1
2,884,133	-		PfGW456L13_2596	0.12	-0.7
2,884,133	-		PfGW456L13_2596	0.12	-1.0
2,884,155	+		PfGW456L13_2596	0.14	+1.3
2,884,155	+		PfGW456L13_2596	0.14	+1.2
2,884,156	-		PfGW456L13_2596	0.14	-0.3
2,884,156	-		PfGW456L13_2596	0.14	-0.1
2,884,156	-		PfGW456L13_2596	0.14	+1.1
2,884,174	+		PfGW456L13_2596	0.16	+1.1
2,884,175	-		PfGW456L13_2596	0.16	-0.6
2,884,175	-		PfGW456L13_2596	0.16	-1.6
2,884,175	-		PfGW456L13_2596	0.16	+0.5
2,884,175	-		PfGW456L13_2596	0.16	+0.2
2,884,264	+		PfGW456L13_2596	0.26	-0.6
2,884,264	+				-0.3
2,884,265	-		PfGW456L13_2596	0.26	+1.4
2,884,328	-		PfGW456L13_2596	0.33	+1.3
2,884,355	+		PfGW456L13_2596	0.36	+0.2
2,884,355	+		PfGW456L13_2596	0.36	+0.8
2,884,355	+		PfGW456L13_2596	0.36	-0.0
2,884,356	-		PfGW456L13_2596	0.36	+1.3
2,884,356	-		PfGW456L13_2596	0.36	-2.3
2,884,379	-		PfGW456L13_2596	0.38	-0.8
2,884,379	-		PfGW456L13_2596	0.38	-0.1
2,884,442	-		PfGW456L13_2596	0.45	+0.4
2,884,658	-		PfGW456L13_2596	0.68	-0.3
2,884,658	-		PfGW456L13_2596	0.68	+0.7
2,884,900	+				-0.2
2,884,900	+				+0.2
2,884,900	+				-0.9
2,884,901	-				+0.5
2,884,966	+				+0.1
2,884,966	+				-0.6
2,884,966	+				-0.4
2,884,966	+				+1.1
2,884,966	+				-0.6
2,884,966	+				-2.9
2,884,966	+				-0.9
2,884,967	-				+1.6
2,884,967	-				-1.3
2,884,967	-				-0.2
2,884,967	-				-0.0
2,884,967	-				-2.0
2,884,967	-				+1.2
2,884,967	-				-0.5
2,884,967	-				-0.4
2,884,967	-				-0.3
2,885,006	-				+1.2
2,885,006	-				-0.1
2,885,006	-				+0.6
2,885,053	+				-0.3
2,885,067	+				-0.2
2,885,068	-				+0.1
2,885,068	-				+0.8
2,885,068	-				-1.1
2,885,076	+				-0.1
2,885,076	+				+0.5
2,885,076	+				+0.7
2,885,076	+				+0.1
2,885,076	+				-0.2
2,885,077	-				-2.5
2,885,077	-				-1.4
2,885,077	-				+0.3
2,885,077	-				-0.9
2,885,077	-				-1.3
2,885,077	-				-0.4
2,885,077	-				-1.5
2,885,108	+				-1.1
2,885,108	+				-0.3
2,885,108	+				+0.3
2,885,108	+				+0.1
2,885,108	+				+0.2
2,885,108	+				+0.2
2,885,108	+				-0.1
2,885,108	+				+0.4
2,885,109	-				-0.5
2,885,109	-				-1.3
2,885,109	-				-0.9
2,885,109	-				-2.4
2,885,165	-				+0.7
2,885,165	-				-0.8
2,885,184	+				-1.3
2,885,184	+				-2.9
2,885,184	+				-1.3
2,885,184	+				-2.0
2,885,184	+				+0.1
2,885,184	+				-1.8
2,885,184	+				-1.8
2,885,184	+				-1.5
2,885,184	+				-3.0
2,885,184	+				-2.2
2,885,184	+				-2.8
2,885,184	+				-0.8
2,885,184	+				-1.5
2,885,184	+				-1.4
2,885,184	+				-2.1
2,885,184	+				-1.8
2,885,184	+				-1.8
2,885,184	+				-3.5
2,885,184	+				-2.9
2,885,184	+				-2.1
2,885,185	-				-3.3
2,885,185	-				-2.1
2,885,185	-				-3.3
2,885,185	-				-1.9
2,885,185	-				-1.0
2,885,185	-				-2.4
2,885,185	-				-3.9
2,885,185	-				-1.3
2,885,185	-				-3.0
2,885,185	-				-2.9
2,885,185	-				-2.8
2,885,185	-				-3.0
2,885,185	-				-2.6
2,885,185	-				-3.7
2,885,185	-				-3.5
2,885,185	-				+0.1
2,885,185	-				-2.9
2,885,185	-				-2.3
2,885,185	-				-0.9
2,885,190	+				-2.2
2,886,075	+		PfGW456L13_2597	0.78	-2.1
2,886,075	+		PfGW456L13_2597	0.78	-2.2
2,886,075	+		PfGW456L13_2597	0.78	-2.9
2,886,075	+		PfGW456L13_2597	0.78	-2.1
2,886,076	-		PfGW456L13_2597	0.78	-1.0
2,886,222	+		PfGW456L13_2597	0.90	-3.3
2,886,222	+		PfGW456L13_2597	0.90	-2.2
2,886,222	+		PfGW456L13_2597	0.90	-3.3
2,886,222	+		PfGW456L13_2597	0.90	-3.8
2,886,222	+		PfGW456L13_2597	0.90	-2.8
2,886,228	+				-1.3
2,886,228	+				-3.7
2,886,228	+				-2.2
2,886,228	+				-3.1
2,886,228	+				-2.3
2,886,228	+				-0.6
2,886,228	+				-2.6
2,886,228	+				-2.2
2,886,228	+				-3.4
2,886,228	+				-4.8
2,886,228	+				-2.2
2,886,228	+				-2.5
2,886,228	+				-2.8
2,886,228	+				-1.9
2,886,228	+				-3.3
2,886,228	+				-1.1
2,886,228	+				-2.8
2,886,228	+				-1.3
2,886,228	+				-5.4
2,886,228	+				-1.7
2,886,228	+				-3.2
2,886,228	+				-3.5
2,886,229	-				-3.1
2,886,229	-				-2.9
2,886,229	-				-2.6
2,886,229	-				-3.3
2,886,229	-				-0.6
2,886,229	-				-0.9
2,886,229	-				-1.3
2,886,229	-				-1.3
2,886,229	-				-2.1
2,886,229	-				-2.3
2,886,229	-				-3.8
2,886,312	+				+0.6
2,886,312	+				+0.5
2,886,312	+				-0.2
2,886,312	+				-0.4
2,886,312	+				+0.2
2,886,312	+				-0.3
2,886,312	+				-1.1
2,886,312	+				-0.4
2,886,312	+				+0.8
2,886,312	+				+0.8
2,886,312	+				+1.2
2,886,312	+				+0.9
2,886,313	-				-0.4
2,886,313	-				+0.1
2,886,313	-				-0.6
2,886,313	-				+0.3
2,886,345	+				-0.8
2,886,345	+				+0.0
2,886,346	-				+1.3
2,886,346	-				-1.3
2,886,375	+				+1.0
2,886,375	+				-0.9
2,886,376	-				+1.3
2,886,376	-				+0.4
2,886,439	+				-1.8
2,886,547	+				-0.7
2,886,548	-				-0.6
2,886,548	-				-0.4
2,886,548	-				+0.2
2,886,783	+		PfGW456L13_2598	0.18	+0.8
2,886,783	+		PfGW456L13_2598	0.18	-0.7
2,886,783	+		PfGW456L13_2598	0.18	-1.7
2,886,783	+		PfGW456L13_2598	0.18	-1.1
2,886,783	+		PfGW456L13_2598	0.18	-1.5
2,886,783	+		PfGW456L13_2598	0.18	+0.7
2,886,783	+		PfGW456L13_2598	0.18	-0.4
2,886,783	+		PfGW456L13_2598	0.18	-1.2
2,886,783	+		PfGW456L13_2598	0.18	+0.2
2,886,783	+		PfGW456L13_2598	0.18	-1.0
2,886,783	+		PfGW456L13_2598	0.18	-0.9
2,886,783	+		PfGW456L13_2598	0.18	-0.8
2,886,783	+		PfGW456L13_2598	0.18	+0.4
2,886,783	+		PfGW456L13_2598	0.18	+1.9
2,886,783	+		PfGW456L13_2598	0.18	-0.1
2,886,783	+		PfGW456L13_2598	0.18	-0.2
2,886,783	+		PfGW456L13_2598	0.18	-1.2
2,886,783	+		PfGW456L13_2598	0.18	+0.0
2,886,783	+		PfGW456L13_2598	0.18	-0.4
2,886,783	+		PfGW456L13_2598	0.18	+0.2
2,886,783	+		PfGW456L13_2598	0.18	-0.8
2,886,784	-		PfGW456L13_2598	0.18	-2.5
2,886,784	-		PfGW456L13_2598	0.18	-0.6
2,886,784	-		PfGW456L13_2598	0.18	-0.3
2,886,784	-		PfGW456L13_2598	0.18	+0.3
2,886,784	-		PfGW456L13_2598	0.18	-0.1
2,886,784	-		PfGW456L13_2598	0.18	-0.8
2,886,784	-		PfGW456L13_2598	0.18	+0.8
2,886,784	-		PfGW456L13_2598	0.18	+0.9
2,886,784	-		PfGW456L13_2598	0.18	-0.4
2,886,784	-		PfGW456L13_2598	0.18	-0.8
2,886,785	+		PfGW456L13_2598	0.18	-1.6
2,886,785	+		PfGW456L13_2598	0.18	+1.1
2,886,785	+		PfGW456L13_2598	0.18	-3.4
2,886,785	+		PfGW456L13_2598	0.18	+0.7
2,886,785	+		PfGW456L13_2598	0.18	-3.1
2,886,785	+		PfGW456L13_2598	0.18	-0.8
2,886,786	-		PfGW456L13_2598	0.18	+0.1
2,886,786	-		PfGW456L13_2598	0.18	-0.5
2,886,786	-		PfGW456L13_2598	0.18	-0.6
2,886,786	-		PfGW456L13_2598	0.18	+0.4
2,886,786	-		PfGW456L13_2598	0.18	-0.1
2,886,786	-		PfGW456L13_2598	0.18	-0.6
2,886,786	-		PfGW456L13_2598	0.18	+0.3
2,886,787	+		PfGW456L13_2598	0.18	+0.4
2,886,787	+		PfGW456L13_2598	0.18	-0.4
2,886,787	+		PfGW456L13_2598	0.18	+0.5
2,886,787	+		PfGW456L13_2598	0.18	+0.2
2,886,787	+		PfGW456L13_2598	0.18	-0.5
2,886,787	+		PfGW456L13_2598	0.18	+0.5
2,886,788	-		PfGW456L13_2598	0.18	+0.0
2,886,788	-		PfGW456L13_2598	0.18	+0.4
2,886,788	-		PfGW456L13_2598	0.18	-0.3
2,886,788	-		PfGW456L13_2598	0.18	+0.1
2,886,990	-		PfGW456L13_2598	0.33	+0.6
2,886,990	-		PfGW456L13_2598	0.33	+0.8
2,887,051	+		PfGW456L13_2598	0.38	-0.8
2,887,051	+		PfGW456L13_2598	0.38	+0.2
2,887,051	+		PfGW456L13_2598	0.38	+0.2
2,887,051	+		PfGW456L13_2598	0.38	+0.3
2,887,051	+		PfGW456L13_2598	0.38	+0.8
2,887,052	-		PfGW456L13_2598	0.38	+1.4
2,887,052	-		PfGW456L13_2598	0.38	+0.6
2,887,052	-		PfGW456L13_2598	0.38	-0.4
2,887,052	-		PfGW456L13_2598	0.38	-0.1
2,887,052	-		PfGW456L13_2598	0.38	-0.4
2,887,052	-		PfGW456L13_2598	0.38	+1.2
2,887,052	-		PfGW456L13_2598	0.38	+0.8
2,887,151	+		PfGW456L13_2598	0.45	+0.5
2,887,166	-		PfGW456L13_2598	0.46	+0.7
2,887,303	+		PfGW456L13_2598	0.57	-1.0
2,887,303	+		PfGW456L13_2598	0.57	+0.1
2,887,304	-		PfGW456L13_2598	0.57	+0.1
2,887,304	-		PfGW456L13_2598	0.57	+0.6
2,887,304	-		PfGW456L13_2598	0.57	-0.1
2,887,330	+		PfGW456L13_2598	0.59	-0.5
2,887,331	-		PfGW456L13_2598	0.59	-0.4
2,887,331	-		PfGW456L13_2598	0.59	+1.1
2,887,331	-		PfGW456L13_2598	0.59	-0.1
2,887,331	-		PfGW456L13_2598	0.59	+0.1
2,887,331	-		PfGW456L13_2598	0.59	-2.1