Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2250

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
2,463,052	+				-0.3
2,463,052	+				+0.2
2,463,052	+				+0.5
2,463,053	-				-0.7
2,463,053	-				+0.2
2,463,053	-				-0.9
2,463,053	-				+1.4
2,463,056	+				-0.5
2,463,056	+				+0.5
2,463,056	+				+0.1
2,463,056	+				+1.4
2,463,056	+				+0.8
2,463,056	+				+0.1
2,463,057	-				+0.0
2,463,057	-				-0.9
2,463,057	-				-1.8
2,463,057	-				-1.1
2,463,057	-				-0.7
2,463,057	-				-0.4
2,463,057	-				+0.5
2,463,057	-				-0.3
2,463,057	-				-0.3
2,463,057	-				+0.3
2,463,057	-				-1.3
2,463,057	-				-0.2
2,463,057	-				+0.6
2,463,091	+				-1.6
2,463,091	+				-0.1
2,463,092	-				+0.1
2,463,119	+				-1.0
2,463,124	+				+1.2
2,463,125	-				-1.2
2,463,131	-				+1.7
2,463,133	+				-0.5
2,463,142	+				+0.3
2,463,171	-				-1.0
2,463,174	+				+0.8
2,463,273	-		PfGW456L13_2249	0.15	+0.2
2,463,309	-		PfGW456L13_2249	0.20	-1.1
2,463,309	-		PfGW456L13_2249	0.20	-0.1
2,463,455	-		PfGW456L13_2249	0.43	-0.0
2,463,535	+		PfGW456L13_2249	0.55	+0.9
2,463,535	+		PfGW456L13_2249	0.55	-0.1
2,463,535	+		PfGW456L13_2249	0.55	+0.4
2,463,536	-		PfGW456L13_2249	0.55	-1.4
2,463,536	-		PfGW456L13_2249	0.55	+0.1
2,463,646	+		PfGW456L13_2249	0.72	-1.0
2,463,646	+		PfGW456L13_2249	0.72	-0.6
2,463,647	-		PfGW456L13_2249	0.72	-2.3
2,463,647	-		PfGW456L13_2249	0.72	+0.1
2,463,647	-		PfGW456L13_2249	0.72	-1.9
2,463,647	-		PfGW456L13_2249	0.72	+0.5
2,463,830	-				-0.3
2,463,832	+				-0.5
2,463,832	+				-0.2
2,463,832	+				+0.6
2,463,832	+				-1.6
2,463,833	-				+0.4
2,463,833	-				-0.3
2,463,845	+				+0.2
2,463,846	-				-0.7
2,463,846	-				-1.8
2,464,011	+				-1.5
2,464,011	+				+0.5
2,464,011	+				-0.3
2,464,011	+				+0.6
2,464,011	+				-0.0
2,464,011	+				-0.1
2,464,011	+				-0.3
2,464,011	+				-0.4
2,464,011	+				+0.2
2,464,012	-				+0.7
2,464,012	-				+0.6
2,464,012	-				+0.7
2,464,012	-				-1.0
2,464,012	-				-0.1
2,464,012	-				+0.6
2,464,014	+				-0.3
2,464,015	-				-1.2
2,464,311	+		PfGW456L13_2250	0.33	-1.7
2,464,311	+		PfGW456L13_2250	0.33	-2.7
2,464,311	+		PfGW456L13_2250	0.33	-3.1
2,464,311	+		PfGW456L13_2250	0.33	-3.1
2,464,311	+		PfGW456L13_2250	0.33	-1.2
2,464,312	-		PfGW456L13_2250	0.34	-1.6
2,464,312	-		PfGW456L13_2250	0.34	-3.0
2,464,312	-		PfGW456L13_2250	0.34	-3.4
2,464,312	-		PfGW456L13_2250	0.34	-0.8
2,464,312	-		PfGW456L13_2250	0.34	-2.3
2,464,312	-		PfGW456L13_2250	0.34	+0.0
2,464,312	-		PfGW456L13_2250	0.34	-1.8
2,464,312	-		PfGW456L13_2250	0.34	-0.9
2,464,312	-		PfGW456L13_2250	0.34	-1.4
2,464,312	-		PfGW456L13_2250	0.34	-1.5
2,464,314	+		PfGW456L13_2250	0.34	-1.1
2,464,314	+		PfGW456L13_2250	0.34	-3.3
2,464,314	+		PfGW456L13_2250	0.34	-3.6
2,464,314	+		PfGW456L13_2250	0.34	-1.6
2,464,315	-		PfGW456L13_2250	0.34	-0.5
2,464,315	-		PfGW456L13_2250	0.34	-2.0
2,464,315	-		PfGW456L13_2250	0.34	-1.9
2,464,315	-		PfGW456L13_2250	0.34	-2.3
2,464,321	+		PfGW456L13_2250	0.35	-0.1
2,464,789	+		PfGW456L13_2250	0.87	-2.1
2,464,874	-				-0.9
2,464,909	+				-2.4
2,464,909	+				-0.3
2,464,910	-				-1.1
2,464,926	+				-1.1
2,464,926	+				-0.6
2,464,926	+				-1.3
2,464,927	-				+0.3
2,464,927	-				+0.0
2,464,940	-				-0.7
2,464,949	+		PfGW456L13_2251	0.11	-0.9
2,464,949	+		PfGW456L13_2251	0.11	-3.7
2,464,950	-		PfGW456L13_2251	0.11	+0.1
2,464,950	-		PfGW456L13_2251	0.11	-3.1
2,464,950	-		PfGW456L13_2251	0.11	+1.0
2,464,950	-		PfGW456L13_2251	0.11	-0.0
2,464,951	+		PfGW456L13_2251	0.11	+0.2
2,464,951	+		PfGW456L13_2251	0.11	-1.6
2,464,951	+		PfGW456L13_2251	0.11	-0.9
2,464,951	+		PfGW456L13_2251	0.11	-1.3
2,464,951	+		PfGW456L13_2251	0.11	+0.2
2,464,951	+		PfGW456L13_2251	0.11	-0.5
2,464,951	+		PfGW456L13_2251	0.11	-1.0
2,464,951	+		PfGW456L13_2251	0.11	-0.4
2,464,951	+		PfGW456L13_2251	0.11	-1.1
2,464,951	+		PfGW456L13_2251	0.11	-2.3
2,464,951	+		PfGW456L13_2251	0.11	-1.1
2,464,951	+		PfGW456L13_2251	0.11	-0.1
2,464,951	+		PfGW456L13_2251	0.11	-1.8
2,464,951	+		PfGW456L13_2251	0.11	+0.5
2,464,951	+		PfGW456L13_2251	0.11	-1.5
2,464,951	+		PfGW456L13_2251	0.11	-1.9
2,464,951	+		PfGW456L13_2251	0.11	-1.0
2,464,951	+		PfGW456L13_2251	0.11	-1.3
2,464,951	+		PfGW456L13_2251	0.11	-2.7
2,464,951	+		PfGW456L13_2251	0.11	-1.4
2,464,951	+		PfGW456L13_2251	0.11	-0.8
2,464,952	-		PfGW456L13_2251	0.12	-1.5
2,464,952	-		PfGW456L13_2251	0.12	-0.5
2,464,952	-		PfGW456L13_2251	0.12	-4.1
2,464,952	-		PfGW456L13_2251	0.12	+0.7
2,464,952	-		PfGW456L13_2251	0.12	+0.9
2,464,952	-		PfGW456L13_2251	0.12	-0.3
2,464,952	-		PfGW456L13_2251	0.12	+1.0
2,464,952	-		PfGW456L13_2251	0.12	-2.8
2,464,952	-		PfGW456L13_2251	0.12	-0.4
2,464,952	-		PfGW456L13_2251	0.12	-0.0
2,464,952	-		PfGW456L13_2251	0.12	+1.2
2,464,952	-		PfGW456L13_2251	0.12	-0.5
2,464,952	-		PfGW456L13_2251	0.12	+0.1
2,464,952	-		PfGW456L13_2251	0.12	+0.7
2,464,952	-		PfGW456L13_2251	0.12	+0.5
2,464,952	-		PfGW456L13_2251	0.12	+0.0
2,464,953	+		PfGW456L13_2251	0.12	-2.9
2,464,953	+		PfGW456L13_2251	0.12	-1.0
2,464,953	+		PfGW456L13_2251	0.12	-1.5
2,464,953	+		PfGW456L13_2251	0.12	-0.7
2,464,953	+		PfGW456L13_2251	0.12	-0.8
2,464,953	+		PfGW456L13_2251	0.12	-1.4
2,464,953	+		PfGW456L13_2251	0.12	-2.8
2,464,953	+		PfGW456L13_2251	0.12	-1.3
2,464,953	+		PfGW456L13_2251	0.12	-1.1
2,464,953	+		PfGW456L13_2251	0.12	-1.4
2,464,953	+		PfGW456L13_2251	0.12	-0.4
2,464,953	+		PfGW456L13_2251	0.12	-3.2
2,464,953	+		PfGW456L13_2251	0.12	-2.1
2,464,953	+		PfGW456L13_2251	0.12	-0.6
2,464,953	+		PfGW456L13_2251	0.12	-1.3
2,464,953	+		PfGW456L13_2251	0.12	-1.7
2,464,953	+		PfGW456L13_2251	0.12	-1.1
2,464,953	+		PfGW456L13_2251	0.12	+0.3
2,464,953	+		PfGW456L13_2251	0.12	-1.8
2,464,953	+		PfGW456L13_2251	0.12	-0.2
2,464,953	+		PfGW456L13_2251	0.12	-1.1
2,464,953	+		PfGW456L13_2251	0.12	-1.7
2,464,953	+		PfGW456L13_2251	0.12	-0.6
2,464,953	+		PfGW456L13_2251	0.12	-0.9
2,464,953	+		PfGW456L13_2251	0.12	-3.1
2,464,953	+		PfGW456L13_2251	0.12	-1.7
2,464,953	+		PfGW456L13_2251	0.12	-1.1
2,464,953	+		PfGW456L13_2251	0.12	+0.0
2,464,953	+		PfGW456L13_2251	0.12	-2.1
2,464,953	+		PfGW456L13_2251	0.12	-1.7
2,464,953	+		PfGW456L13_2251	0.12	-1.8
2,464,953	+		PfGW456L13_2251	0.12	-0.6
2,464,953	+		PfGW456L13_2251	0.12	-0.5
2,464,953	+		PfGW456L13_2251	0.12	-1.6
2,464,953	+		PfGW456L13_2251	0.12	-2.7
2,464,953	+		PfGW456L13_2251	0.12	-0.9
2,464,953	+		PfGW456L13_2251	0.12	-0.9
2,464,953	+		PfGW456L13_2251	0.12	-0.8
2,464,953	+		PfGW456L13_2251	0.12	-2.3
2,464,953	+		PfGW456L13_2251	0.12	-0.7
2,464,954	-		PfGW456L13_2251	0.13	+0.6
2,464,954	-		PfGW456L13_2251	0.13	-1.3
2,464,954	-		PfGW456L13_2251	0.13	-0.2
2,464,954	-		PfGW456L13_2251	0.13	+0.4
2,464,954	-		PfGW456L13_2251	0.13	-0.6
2,464,954	-		PfGW456L13_2251	0.13	-0.6
2,464,954	-		PfGW456L13_2251	0.13	-2.1
2,464,954	-		PfGW456L13_2251	0.13	-0.0
2,464,954	-		PfGW456L13_2251	0.13	+0.7
2,464,954	-		PfGW456L13_2251	0.13	+0.7
2,464,954	-		PfGW456L13_2251	0.13	+1.4
2,464,954	-		PfGW456L13_2251	0.13	-1.4
2,464,954	-		PfGW456L13_2251	0.13	-1.0
2,464,954	-		PfGW456L13_2251	0.13	+0.3
2,464,954	-		PfGW456L13_2251	0.13	-0.9
2,464,954	-		PfGW456L13_2251	0.13	-0.0
2,464,954	-		PfGW456L13_2251	0.13	+0.6
2,464,971	+		PfGW456L13_2251	0.19	-2.8
2,464,987	+		PfGW456L13_2251	0.25	-1.4
2,465,004	+		PfGW456L13_2251	0.32	-0.4
2,465,004	+		PfGW456L13_2251	0.32	+0.2
2,465,005	-		PfGW456L13_2251	0.33	-0.5
2,465,005	-		PfGW456L13_2251	0.33	-0.9
2,465,017	+				-1.1
2,465,018	-		PfGW456L13_2251	0.38	-0.7
2,465,018	-		PfGW456L13_2251	0.38	-0.5
2,465,045	+		PfGW456L13_2251	0.48	+0.2
2,465,045	+		PfGW456L13_2251	0.48	-1.2
2,465,045	+				+0.3
2,465,045	+		PfGW456L13_2251	0.48	+0.5
2,465,045	+		PfGW456L13_2251	0.48	-0.8
2,465,045	+		PfGW456L13_2251	0.48	+0.1
2,465,045	+		PfGW456L13_2251	0.48	+1.6
2,465,046	-		PfGW456L13_2251	0.49	+1.2
2,465,046	-		PfGW456L13_2251	0.49	+0.9
2,465,046	-		PfGW456L13_2251	0.49	+0.2
2,465,046	-		PfGW456L13_2251	0.49	-0.1
2,465,046	-		PfGW456L13_2251	0.49	+0.3
2,465,046	-		PfGW456L13_2251	0.49	+1.2
2,465,046	-		PfGW456L13_2251	0.49	-0.6
2,465,437	+		PfGW456L13_2252	0.18	-0.1
2,465,437	+		PfGW456L13_2252	0.18	+0.5
2,465,437	+		PfGW456L13_2252	0.18	-1.3
2,465,437	+		PfGW456L13_2252	0.18	-0.7
2,465,437	+		PfGW456L13_2252	0.18	-1.6
2,465,437	+		PfGW456L13_2252	0.18	+1.0
2,465,437	+		PfGW456L13_2252	0.18	+0.2
2,465,437	+		PfGW456L13_2252	0.18	+0.6
2,465,437	+		PfGW456L13_2252	0.18	-0.8
2,465,438	-		PfGW456L13_2252	0.18	-1.2
2,465,438	-		PfGW456L13_2252	0.18	+0.0
2,465,438	-		PfGW456L13_2252	0.18	+0.5
2,465,438	-		PfGW456L13_2252	0.18	-0.2
2,465,438	-		PfGW456L13_2252	0.18	+1.3
2,465,645	-		PfGW456L13_2252	0.35	-1.2
2,465,806	+		PfGW456L13_2252	0.48	-1.2
2,465,806	+		PfGW456L13_2252	0.48	-1.1
2,465,806	+		PfGW456L13_2252	0.48	-0.2
2,465,807	-		PfGW456L13_2252	0.48	-0.7
2,465,807	-				+1.8
2,465,807	-		PfGW456L13_2252	0.48	+1.0
2,465,807	-		PfGW456L13_2252	0.48	-0.4
2,465,807	-		PfGW456L13_2252	0.48	+0.6
2,465,881	+		PfGW456L13_2252	0.55	-0.6
2,465,882	-		PfGW456L13_2252	0.55	+0.5