Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2230

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
2,445,477	+				-0.7
2,445,477	+				-0.1
2,445,477	+				-0.2
2,445,477	+				+0.9
2,445,478	-				-0.1
2,445,478	-				+0.9
2,445,478	-				+0.9
2,445,478	-				-0.2
2,445,478	-				-0.6
2,445,478	-				+0.0
2,445,497	+				+0.2
2,445,498	-				+1.0
2,445,533	-				+0.3
2,445,550	+				-0.9
2,445,550	+				-1.3
2,445,550	+				+0.5
2,445,550	+				-0.0
2,445,550	+				-0.6
2,445,551	-				-0.4
2,445,551	-				-0.6
2,445,551	-				+0.1
2,445,594	+				+0.1
2,445,594	+				+0.7
2,445,594	+				-0.1
2,445,594	+				-0.3
2,445,594	+				-0.7
2,445,595	-				-2.0
2,445,595	-				-0.6
2,445,595	-				-2.0
2,445,595	-				+0.1
2,445,613	+				-0.1
2,445,613	+				-1.6
2,445,613	+				+0.2
2,445,614	-				-0.5
2,445,614	-				-2.6
2,445,614	-				-0.6
2,445,635	-				+0.4
2,445,694	+		PfGW456L13_2229	0.20	+0.2
2,445,694	+		PfGW456L13_2229	0.20	-0.9
2,445,694	+		PfGW456L13_2229	0.20	-1.8
2,445,694	+		PfGW456L13_2229	0.20	-1.2
2,445,694	+		PfGW456L13_2229	0.20	-0.5
2,445,694	+		PfGW456L13_2229	0.20	-0.5
2,445,694	+		PfGW456L13_2229	0.20	-1.0
2,445,694	+		PfGW456L13_2229	0.20	-0.3
2,445,694	+		PfGW456L13_2229	0.20	-0.5
2,445,694	+		PfGW456L13_2229	0.20	-0.6
2,445,694	+		PfGW456L13_2229	0.20	-0.0
2,445,694	+		PfGW456L13_2229	0.20	-0.7
2,445,694	+		PfGW456L13_2229	0.20	-0.6
2,445,695	-		PfGW456L13_2229	0.20	-1.4
2,445,695	-		PfGW456L13_2229	0.20	-0.2
2,445,695	-		PfGW456L13_2229	0.20	-0.8
2,445,695	-		PfGW456L13_2229	0.20	-0.9
2,445,695	-		PfGW456L13_2229	0.20	+0.3
2,445,695	-		PfGW456L13_2229	0.20	-0.1
2,445,695	-				-1.1
2,445,695	-		PfGW456L13_2229	0.20	-0.5
2,445,751	+		PfGW456L13_2229	0.31	-0.9
2,445,798	+		PfGW456L13_2229	0.40	+0.2
2,445,813	+		PfGW456L13_2229	0.43	-0.8
2,445,894	-		PfGW456L13_2229	0.59	-1.4
2,445,968	+		PfGW456L13_2229	0.74	+1.4
2,445,969	-		PfGW456L13_2229	0.74	-1.3
2,445,969	-		PfGW456L13_2229	0.74	-2.1
2,445,969	-		PfGW456L13_2229	0.74	-2.2
2,445,969	-		PfGW456L13_2229	0.74	-0.9
2,445,969	-		PfGW456L13_2229	0.74	-0.0
2,445,972	+		PfGW456L13_2229	0.75	-0.4
2,445,972	+		PfGW456L13_2229	0.75	+0.2
2,445,972	+		PfGW456L13_2229	0.75	+0.9
2,445,972	+		PfGW456L13_2229	0.75	-0.1
2,445,973	-		PfGW456L13_2229	0.75	-1.5
2,445,973	-		PfGW456L13_2229	0.75	-0.4
2,445,973	-		PfGW456L13_2229	0.75	-2.8
2,445,973	-		PfGW456L13_2229	0.75	-0.9
2,445,973	-		PfGW456L13_2229	0.75	-0.9
2,446,054	+				-0.1
2,446,055	-				-1.3
2,446,055	-				-1.1
2,446,096	+				-0.5
2,446,096	+				-0.1
2,446,096	+				-0.6
2,446,096	+				+0.1
2,446,097	-				+0.3
2,446,097	-				+0.2
2,446,097	-				-0.3
2,446,107	+				+1.1
2,446,156	+				+1.1
2,446,156	+				-1.1
2,446,158	+				-1.8
2,446,158	+				-0.1
2,446,159	-				-1.3
2,446,159	-				-2.6
2,446,162	+				-0.4
2,446,162	+				-0.0
2,446,162	+				+0.4
2,446,162	+				-0.7
2,446,162	+				-0.9
2,446,163	-				-1.8
2,446,164	+				-1.1
2,446,164	+				-0.0
2,446,164	+				+0.1
2,446,164	+				+1.8
2,446,165	-				-1.5
2,446,166	+				-0.4
2,446,191	+				+0.9
2,446,191	+				+1.4
2,446,192	-				-0.1
2,446,211	+				-1.9
2,446,211	+				-2.7
2,446,212	-				-3.0
2,446,212	-				-2.1
2,446,212	-				-0.1
2,446,212	-				-3.8
2,446,212	-				-2.1
2,446,233	+				-1.4
2,446,233	+				-2.8
2,446,290	+				-3.1
2,446,514	+		PfGW456L13_2230	0.31	-0.7
2,446,515	-		PfGW456L13_2230	0.31	-2.7
2,446,544	-		PfGW456L13_2230	0.34	-2.1
2,446,800	+		PfGW456L13_2230	0.60	-3.2
2,446,800	+		PfGW456L13_2230	0.60	-3.9
2,446,800	+		PfGW456L13_2230	0.60	-3.1
2,446,800	+		PfGW456L13_2230	0.60	-1.4
2,446,801	-		PfGW456L13_2230	0.60	-2.6
2,446,801	-		PfGW456L13_2230	0.60	-3.8
2,446,801	-		PfGW456L13_2230	0.60	-3.5
2,446,801	-		PfGW456L13_2230	0.60	-2.7
2,446,908	+		PfGW456L13_2230	0.71	-2.6
2,446,908	+		PfGW456L13_2230	0.71	-2.1
2,446,908	+		PfGW456L13_2230	0.71	-2.2
2,446,908	+		PfGW456L13_2230	0.71	-2.3
2,446,908	+		PfGW456L13_2230	0.71	-3.1
2,446,908	+		PfGW456L13_2230	0.71	-2.5
2,446,908	+		PfGW456L13_2230	0.71	-1.0
2,446,908	+		PfGW456L13_2230	0.71	-1.4
2,446,909	-		PfGW456L13_2230	0.71	-3.3
2,446,909	-		PfGW456L13_2230	0.71	-0.4
2,446,909	-		PfGW456L13_2230	0.71	-1.4
2,446,909	-		PfGW456L13_2230	0.71	-2.2
2,446,909	-		PfGW456L13_2230	0.71	-2.3
2,446,930	+		PfGW456L13_2230	0.74	-1.1
2,446,985	-		PfGW456L13_2230	0.79	-2.9
2,447,174	-				-2.6
2,447,174	-				+0.1
2,447,322	+		PfGW456L13_2231	0.25	+0.0
2,447,323	-		PfGW456L13_2231	0.25	+0.3
2,447,450	+		PfGW456L13_2231	0.51	+0.2
2,447,450	+		PfGW456L13_2231	0.51	+0.0
2,447,531	+		PfGW456L13_2231	0.68	-0.2
2,447,532	-		PfGW456L13_2231	0.68	+0.7
2,447,558	+		PfGW456L13_2231	0.73	-0.3
2,447,558	+		PfGW456L13_2231	0.73	+0.2
2,447,558	+		PfGW456L13_2231	0.73	+0.4
2,447,558	+		PfGW456L13_2231	0.73	-2.2
2,447,559	-		PfGW456L13_2231	0.74	-1.1
2,447,600	+		PfGW456L13_2231	0.82	+0.8
2,447,600	+		PfGW456L13_2231	0.82	+1.0
2,447,679	+				+0.7
2,447,679	+				+0.2
2,447,680	-				-0.5
2,447,680	-				-1.4
2,447,848	+		PfGW456L13_2232	0.39	-0.4
2,447,848	+		PfGW456L13_2232	0.39	-1.0
2,447,848	+		PfGW456L13_2232	0.39	+1.3
2,448,151	+				+0.2
2,448,152	-				-0.0
2,448,152	-				-0.1
2,448,180	-				-1.3
2,448,180	-				-0.7
2,448,184	+				+0.4
2,448,185	-				-0.1