Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1871

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
2,058,367	+		PfGW456L13_1870	0.56	+0.1
2,058,368	-		PfGW456L13_1870	0.57	+0.2
2,058,515	+		PfGW456L13_1870	0.66	+0.1
2,058,515	+		PfGW456L13_1870	0.66	+0.1
2,058,516	-		PfGW456L13_1870	0.66	+0.6
2,058,516	-		PfGW456L13_1870	0.66	+0.5
2,058,690	-		PfGW456L13_1870	0.78	-0.3
2,058,906	+				+0.1
2,058,906	+				-0.4
2,058,907	-				-0.3
2,058,907	-				+0.7
2,058,908	+				+0.0
2,058,908	+				+1.1
2,058,908	+				+0.6
2,058,908	+				+1.0
2,058,908	+				+1.0
2,058,908	+				+0.7
2,058,908	+				+0.1
2,058,908	+				+0.2
2,058,908	+				+0.3
2,058,908	+				-0.6
2,058,909	-				+0.5
2,059,018	-				+0.4
2,059,062	+				+0.8
2,059,062	+				+0.5
2,059,062	+				-0.4
2,059,062	+				+1.1
2,059,062	+				+0.7
2,059,062	+				-1.4
2,059,062	+				+1.2
2,059,063	-				+0.5
2,059,063	-				-0.6
2,059,063	-				+1.0
2,059,079	+				+0.6
2,059,189	-				+0.2
2,059,293	+		PfGW456L13_1871	0.14	+0.8
2,059,322	-		PfGW456L13_1871	0.22	-0.8
2,059,349	+		PfGW456L13_1871	0.29	+0.4
2,059,350	-		PfGW456L13_1871	0.30	+0.5
2,059,408	+		PfGW456L13_1871	0.46	-0.2
2,059,408	+				-1.8
2,059,409	-		PfGW456L13_1871	0.46	-1.7
2,059,409	-		PfGW456L13_1871	0.46	+0.4
2,059,519	+		PfGW456L13_1871	0.76	-0.8
2,059,519	+		PfGW456L13_1871	0.76	-0.4
2,059,537	+		PfGW456L13_1871	0.81	+2.2
2,059,537	+		PfGW456L13_1871	0.81	+1.6
2,059,537	+		PfGW456L13_1871	0.81	-0.7
2,059,537	+		PfGW456L13_1871	0.81	+1.0
2,059,537	+		PfGW456L13_1871	0.81	-0.3
2,059,537	+		PfGW456L13_1871	0.81	+2.0
2,059,537	+		PfGW456L13_1871	0.81	-0.2
2,059,537	+		PfGW456L13_1871	0.81	-0.0
2,059,538	-		PfGW456L13_1871	0.82	-0.6
2,059,538	-		PfGW456L13_1871	0.82	-0.5
2,059,538	-		PfGW456L13_1871	0.82	-1.2
2,059,538	-		PfGW456L13_1871	0.82	-0.3
2,059,669	+				+0.3
2,059,669	+				+0.1
2,059,670	-				-0.1
2,059,675	+				+0.3
2,059,675	+				-0.6
2,059,676	-				-0.3
2,059,676	-				+0.5
2,059,676	-				+0.3
2,059,676	-				-0.6
2,059,676	-				-0.4
2,059,697	+				+0.5
2,059,698	-				+0.6
2,059,709	+				-0.2
2,060,024	+		PfGW456L13_1872	0.38	-0.1
2,060,024	+		PfGW456L13_1872	0.38	-0.2
2,060,024	+		PfGW456L13_1872	0.38	+0.1
2,060,024	+		PfGW456L13_1872	0.38	+0.5
2,060,024	+		PfGW456L13_1872	0.38	+0.1
2,060,025	-		PfGW456L13_1872	0.38	-0.1
2,060,025	-		PfGW456L13_1872	0.38	+0.3
2,060,025	-		PfGW456L13_1872	0.38	+0.1
2,060,025	-		PfGW456L13_1872	0.38	-1.7
2,060,025	-		PfGW456L13_1872	0.38	+0.5
2,060,025	-		PfGW456L13_1872	0.38	-0.3
2,060,026	+		PfGW456L13_1872	0.38	+0.3
2,060,026	+		PfGW456L13_1872	0.38	+2.3
2,060,026	+		PfGW456L13_1872	0.38	-0.7
2,060,026	+		PfGW456L13_1872	0.38	+0.2
2,060,026	+		PfGW456L13_1872	0.38	-0.6
2,060,026	+		PfGW456L13_1872	0.38	-0.5
2,060,026	+		PfGW456L13_1872	0.38	-0.1
2,060,026	+		PfGW456L13_1872	0.38	+0.2
2,060,026	+				+0.0
2,060,026	+		PfGW456L13_1872	0.38	+1.8
2,060,026	+		PfGW456L13_1872	0.38	-0.7
2,060,026	+		PfGW456L13_1872	0.38	-1.3
2,060,026	+		PfGW456L13_1872	0.38	-0.6
2,060,026	+		PfGW456L13_1872	0.38	+0.4
2,060,026	+		PfGW456L13_1872	0.38	+1.0
2,060,026	+		PfGW456L13_1872	0.38	-1.3
2,060,026	+		PfGW456L13_1872	0.38	+1.8
2,060,026	+		PfGW456L13_1872	0.38	+1.0
2,060,026	+		PfGW456L13_1872	0.38	-0.8
2,060,026	+		PfGW456L13_1872	0.38	-2.4
2,060,026	+		PfGW456L13_1872	0.38	+0.3
2,060,026	+		PfGW456L13_1872	0.38	+0.3
2,060,026	+				-0.3
2,060,026	+		PfGW456L13_1872	0.38	-1.4
2,060,026	+		PfGW456L13_1872	0.38	+0.8
2,060,026	+		PfGW456L13_1872	0.38	+1.7
2,060,026	+		PfGW456L13_1872	0.38	+0.9
2,060,026	+		PfGW456L13_1872	0.38	+1.0
2,060,026	+		PfGW456L13_1872	0.38	-0.6
2,060,026	+		PfGW456L13_1872	0.38	+1.3
2,060,026	+				-0.6
2,060,026	+		PfGW456L13_1872	0.38	+0.1
2,060,026	+		PfGW456L13_1872	0.38	-1.8
2,060,026	+		PfGW456L13_1872	0.38	+0.9
2,060,026	+		PfGW456L13_1872	0.38	+0.4
2,060,026	+		PfGW456L13_1872	0.38	-0.2
2,060,026	+		PfGW456L13_1872	0.38	+0.8
2,060,026	+		PfGW456L13_1872	0.38	+0.5
2,060,026	+		PfGW456L13_1872	0.38	+0.2
2,060,026	+		PfGW456L13_1872	0.38	+1.0
2,060,026	+		PfGW456L13_1872	0.38	-3.1
2,060,026	+		PfGW456L13_1872	0.38	+0.5
2,060,026	+		PfGW456L13_1872	0.38	+0.4
2,060,026	+		PfGW456L13_1872	0.38	+0.7
2,060,026	+		PfGW456L13_1872	0.38	+0.3
2,060,026	+		PfGW456L13_1872	0.38	+0.7
2,060,027	-		PfGW456L13_1872	0.39	+0.1
2,060,027	-		PfGW456L13_1872	0.39	-0.2
2,060,027	-		PfGW456L13_1872	0.39	-0.2
2,060,027	-		PfGW456L13_1872	0.39	+0.8
2,060,027	-		PfGW456L13_1872	0.39	+0.5
2,060,027	-		PfGW456L13_1872	0.39	+1.3
2,060,027	-		PfGW456L13_1872	0.39	+0.3
2,060,027	-		PfGW456L13_1872	0.39	-0.2
2,060,027	-		PfGW456L13_1872	0.39	-0.5
2,060,027	-		PfGW456L13_1872	0.39	-0.2
2,060,027	-		PfGW456L13_1872	0.39	-0.2
2,060,027	-		PfGW456L13_1872	0.39	+0.2
2,060,027	-		PfGW456L13_1872	0.39	-1.2
2,060,027	-		PfGW456L13_1872	0.39	+0.0
2,060,027	-		PfGW456L13_1872	0.39	-1.0
2,060,027	-		PfGW456L13_1872	0.39	+0.5
2,060,027	-		PfGW456L13_1872	0.39	-0.6
2,060,027	-		PfGW456L13_1872	0.39	+0.0
2,060,027	-		PfGW456L13_1872	0.39	-0.1
2,060,027	-		PfGW456L13_1872	0.39	+0.1
2,060,027	-		PfGW456L13_1872	0.39	+0.3
2,060,027	-		PfGW456L13_1872	0.39	-0.1
2,060,027	-		PfGW456L13_1872	0.39	+0.0
2,060,027	-		PfGW456L13_1872	0.39	+0.4
2,060,027	-		PfGW456L13_1872	0.39	-0.6
2,060,027	-		PfGW456L13_1872	0.39	-1.0
2,060,027	-		PfGW456L13_1872	0.39	-0.3
2,060,027	-		PfGW456L13_1872	0.39	+0.0
2,060,027	-		PfGW456L13_1872	0.39	-0.5
2,060,027	-		PfGW456L13_1872	0.39	-0.8
2,060,027	-		PfGW456L13_1872	0.39	-0.0
2,060,027	-		PfGW456L13_1872	0.39	-0.6
2,060,027	-		PfGW456L13_1872	0.39	+1.0
2,060,027	-		PfGW456L13_1872	0.39	-0.4
2,060,027	-		PfGW456L13_1872	0.39	-1.7
2,060,027	-		PfGW456L13_1872	0.39	-0.3
2,060,027	-		PfGW456L13_1872	0.39	+0.4
2,060,027	-		PfGW456L13_1872	0.39	+0.8
2,060,027	-		PfGW456L13_1872	0.39	-0.1
2,060,027	-		PfGW456L13_1872	0.39	+0.7
2,060,027	-		PfGW456L13_1872	0.39	+1.2
2,060,027	-		PfGW456L13_1872	0.39	-0.4
2,060,027	-		PfGW456L13_1872	0.39	-0.3
2,060,146	+		PfGW456L13_1872	0.51	-1.0
2,060,146	+		PfGW456L13_1872	0.51	+0.0
2,060,215	+		PfGW456L13_1872	0.59	-0.8
2,060,215	+		PfGW456L13_1872	0.59	+0.1
2,060,215	+		PfGW456L13_1872	0.59	-3.2
2,060,215	+		PfGW456L13_1872	0.59	+0.3
2,060,215	+		PfGW456L13_1872	0.59	+0.7
2,060,215	+		PfGW456L13_1872	0.59	+0.4
2,060,216	-		PfGW456L13_1872	0.59	+0.6
2,060,216	-		PfGW456L13_1872	0.59	+1.1
2,060,345	-		PfGW456L13_1872	0.73	-1.7
2,060,408	-		PfGW456L13_1872	0.80	+0.0
2,060,408	-		PfGW456L13_1872	0.80	+0.0
2,060,408	-				+2.3
2,060,592	-				+0.0
2,060,603	+				-2.7
2,060,603	+				+0.7
2,060,603	+				+0.0
2,060,603	+				+0.3
2,060,604	-				+0.1
2,060,604	-				-0.6
2,060,604	-				-1.8
2,060,604	-				-0.1
2,060,604	-				-0.0