Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1866

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
2,050,153	+		PfGW456L13_1864	0.53	-0.1
2,050,153	+		PfGW456L13_1864	0.53	+0.3
2,050,153	+				+0.0
2,050,154	-		PfGW456L13_1864	0.53	-0.3
2,050,259	+		PfGW456L13_1864	0.74	-0.8
2,050,259	+		PfGW456L13_1864	0.74	-0.1
2,050,259	+		PfGW456L13_1864	0.74	-1.7
2,050,259	+		PfGW456L13_1864	0.74	-0.0
2,050,260	-		PfGW456L13_1864	0.75	+0.1
2,050,260	-		PfGW456L13_1864	0.75	+0.8
2,050,260	-		PfGW456L13_1864	0.75	+0.3
2,050,260	-		PfGW456L13_1864	0.75	+0.4
2,050,260	-		PfGW456L13_1864	0.75	+0.5
2,050,260	-		PfGW456L13_1864	0.75	+0.0
2,050,260	-		PfGW456L13_1864	0.75	+0.7
2,050,260	-		PfGW456L13_1864	0.75	+0.1
2,050,260	-		PfGW456L13_1864	0.75	+1.4
2,050,307	+		PfGW456L13_1864	0.84	-0.3
2,050,307	+		PfGW456L13_1864	0.84	-0.2
2,050,307	+		PfGW456L13_1864	0.84	-0.6
2,050,307	+		PfGW456L13_1864	0.84	+0.4
2,050,308	-		PfGW456L13_1864	0.84	+0.4
2,050,422	+				-1.0
2,050,422	+				+0.2
2,050,493	+				+2.5
2,050,493	+				+1.4
2,050,494	-				+2.0
2,050,494	-				+2.6
2,050,494	-				+1.1
2,050,630	+		PfGW456L13_1865	0.71	+2.5
2,050,631	-		PfGW456L13_1865	0.72	+1.5
2,050,696	-				+1.9
2,050,744	+				+1.9
2,050,744	+				+1.6
2,050,745	-				+1.8
2,050,767	+				+0.4
2,050,768	-				+2.0
2,050,768	-				+1.9
2,050,768	-				+0.9
2,050,768	-				+1.6
2,050,789	+				-1.8
2,050,790	-				+2.1
2,050,790	-				+2.1
2,050,790	-				+3.2
2,050,790	-				+2.3
2,050,790	-				+2.4
2,050,793	+				+0.5
2,050,793	+				+3.1
2,050,793	+				+1.3
2,050,793	+				+0.6
2,050,794	-				+2.5
2,050,800	+				+2.7
2,050,800	+				+2.8
2,050,801	-				+2.0
2,050,801	-				+2.1
2,050,805	+				+2.1
2,050,892	+				+1.1
2,050,901	+				+2.8
2,050,926	-				+0.9
2,050,926	-				+0.0
2,050,981	+				+1.9
2,051,049	+				+3.9
2,051,049	+				+0.6
2,051,075	-				+1.0
2,051,078	+				+3.0
2,051,078	+				+2.5
2,051,081	-				+2.1
2,051,135	+				+1.4
2,051,136	-				+0.1
2,051,136	-				-0.8
2,051,136	-				+0.9
2,051,136	-				+0.5
2,051,196	+				+1.5
2,051,197	-				-3.9
2,051,197	-				+0.1
2,051,197	-				+0.4
2,051,197	-				+0.4
2,051,211	+		PfGW456L13_1866	0.10	+3.7
2,051,211	+		PfGW456L13_1866	0.10	+1.5
2,051,212	-		PfGW456L13_1866	0.11	+0.0
2,051,320	+		PfGW456L13_1866	0.20	+1.9
2,051,320	+		PfGW456L13_1866	0.20	+1.2
2,051,320	+				-1.6
2,051,320	+		PfGW456L13_1866	0.20	+2.5
2,051,320	+		PfGW456L13_1866	0.20	+1.3
2,051,320	+		PfGW456L13_1866	0.20	+1.4
2,051,321	-		PfGW456L13_1866	0.20	+1.5
2,051,321	-		PfGW456L13_1866	0.20	+0.6
2,051,321	-		PfGW456L13_1866	0.20	+0.4
2,051,321	-		PfGW456L13_1866	0.20	+1.0
2,051,321	-		PfGW456L13_1866	0.20	+0.6
2,051,342	+		PfGW456L13_1866	0.22	+2.3
2,051,342	+		PfGW456L13_1866	0.22	+1.3
2,051,342	+		PfGW456L13_1866	0.22	+1.5
2,051,343	-		PfGW456L13_1866	0.22	-0.4
2,051,343	-		PfGW456L13_1866	0.22	+2.1
2,051,343	-		PfGW456L13_1866	0.22	+0.8
2,051,343	-		PfGW456L13_1866	0.22	-0.8
2,051,343	-		PfGW456L13_1866	0.22	+1.0
2,051,343	-		PfGW456L13_1866	0.22	+0.7
2,051,381	+		PfGW456L13_1866	0.26	+0.0
2,051,381	+		PfGW456L13_1866	0.26	+0.7
2,051,500	-		PfGW456L13_1866	0.36	+1.9
2,052,217	+				+1.3
2,052,217	+				-0.3
2,052,217	+				+1.9
2,052,217	+				-0.0
2,052,217	+				-0.4
2,052,217	+				+0.7
2,052,217	+				+0.9
2,052,218	-				-2.6
2,052,218	-				+0.6
2,052,218	-				+2.2
2,052,303	+				+1.2
2,052,304	-				-0.4
2,052,548	+		PfGW456L13_1867	0.21	+0.4
2,052,548	+		PfGW456L13_1867	0.21	+0.7
2,052,548	+		PfGW456L13_1867	0.21	+0.4
2,052,642	+		PfGW456L13_1867	0.28	+0.8
2,052,642	+		PfGW456L13_1867	0.28	+1.0
2,052,642	+		PfGW456L13_1867	0.28	+0.4
2,052,642	+		PfGW456L13_1867	0.28	+1.1
2,052,642	+		PfGW456L13_1867	0.28	+0.3
2,052,642	+		PfGW456L13_1867	0.28	-0.1
2,052,643	-		PfGW456L13_1867	0.28	+0.4
2,052,643	-		PfGW456L13_1867	0.28	+0.0
2,052,643	-		PfGW456L13_1867	0.28	-0.7
2,052,643	-		PfGW456L13_1867	0.28	+2.5
2,052,709	+		PfGW456L13_1867	0.33	+1.3
2,052,720	+		PfGW456L13_1867	0.34	-0.0
2,052,720	+		PfGW456L13_1867	0.34	+0.2
2,052,720	+		PfGW456L13_1867	0.34	+0.5
2,052,720	+		PfGW456L13_1867	0.34	+0.1
2,052,720	+		PfGW456L13_1867	0.34	+1.0
2,052,720	+		PfGW456L13_1867	0.34	+1.6
2,052,720	+		PfGW456L13_1867	0.34	-0.1
2,052,720	+		PfGW456L13_1867	0.34	+1.4
2,052,720	+		PfGW456L13_1867	0.34	+0.9
2,052,720	+		PfGW456L13_1867	0.34	+2.3
2,052,720	+		PfGW456L13_1867	0.34	+0.8
2,052,720	+		PfGW456L13_1867	0.34	+2.1
2,052,720	+		PfGW456L13_1867	0.34	+0.7
2,052,720	+		PfGW456L13_1867	0.34	+1.0
2,052,720	+		PfGW456L13_1867	0.34	+0.5
2,052,720	+		PfGW456L13_1867	0.34	+0.4
2,052,720	+		PfGW456L13_1867	0.34	+1.5
2,052,720	+		PfGW456L13_1867	0.34	+1.5
2,052,720	+		PfGW456L13_1867	0.34	+0.4
2,052,720	+		PfGW456L13_1867	0.34	+2.1
2,052,720	+		PfGW456L13_1867	0.34	+0.3
2,052,720	+		PfGW456L13_1867	0.34	+2.0
2,052,720	+		PfGW456L13_1867	0.34	+0.9
2,052,721	-		PfGW456L13_1867	0.34	+0.2
2,052,721	-		PfGW456L13_1867	0.34	+0.4
2,052,721	-		PfGW456L13_1867	0.34	+0.4
2,052,721	-		PfGW456L13_1867	0.34	-0.8
2,052,721	-		PfGW456L13_1867	0.34	+1.0
2,052,721	-		PfGW456L13_1867	0.34	+1.0
2,052,721	-		PfGW456L13_1867	0.34	+0.9
2,052,721	-		PfGW456L13_1867	0.34	+2.1
2,052,721	-		PfGW456L13_1867	0.34	+0.2
2,052,721	-		PfGW456L13_1867	0.34	-0.1
2,052,721	-		PfGW456L13_1867	0.34	+0.0
2,052,721	-		PfGW456L13_1867	0.34	-0.1
2,052,721	-		PfGW456L13_1867	0.34	-1.3
2,052,721	-				+0.6
2,052,721	-		PfGW456L13_1867	0.34	+0.9
2,052,721	-		PfGW456L13_1867	0.34	+1.2
2,052,721	-		PfGW456L13_1867	0.34	-1.0
2,052,721	-		PfGW456L13_1867	0.34	+0.2
2,052,721	-		PfGW456L13_1867	0.34	+1.1
2,052,723	+		PfGW456L13_1867	0.34	+1.1
2,052,723	+		PfGW456L13_1867	0.34	+1.4
2,052,723	+		PfGW456L13_1867	0.34	+0.1
2,052,724	-		PfGW456L13_1867	0.34	+1.4
2,052,774	-		PfGW456L13_1867	0.38	+0.8
2,053,071	+		PfGW456L13_1867	0.59	+0.4
2,053,071	+		PfGW456L13_1867	0.59	-0.6
2,053,071	+		PfGW456L13_1867	0.59	+0.1
2,053,072	-		PfGW456L13_1867	0.59	+1.5
2,053,197	+		PfGW456L13_1867	0.68	+0.5
2,053,197	+		PfGW456L13_1867	0.68	+1.4
2,053,198	-		PfGW456L13_1867	0.69	-1.5
2,053,200	+		PfGW456L13_1867	0.69	-2.7
2,053,201	-		PfGW456L13_1867	0.69	-0.3
2,053,201	-		PfGW456L13_1867	0.69	+0.2