Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1842

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
2,030,267	+				+0.3
2,030,267	+				+1.4
2,030,267	+				+0.4
2,030,267	+				-1.4
2,030,267	+				-1.1
2,030,267	+				-0.0
2,030,267	+				-0.0
2,030,268	-				+1.4
2,030,268	-				+0.0
2,030,268	-				-0.2
2,030,268	-				-0.5
2,030,268	-				-0.1
2,030,268	-				-0.1
2,030,268	-				-0.5
2,030,268	-				+0.6
2,030,277	+				-0.7
2,030,277	+				-1.2
2,030,277	+				-1.1
2,030,277	+				-0.0
2,030,277	+				-0.9
2,030,278	-				-1.2
2,030,278	-				-2.6
2,030,278	-				-1.1
2,030,278	-				-0.1
2,030,278	-				-1.0
2,030,289	+				+0.8
2,030,340	-				-0.8
2,030,352	+				+0.7
2,030,352	+				+0.8
2,030,353	-				+0.7
2,030,433	+		PfGW456L13_1841	0.19	-0.6
2,030,433	+		PfGW456L13_1841	0.19	+0.2
2,030,433	+		PfGW456L13_1841	0.19	-0.6
2,030,434	-		PfGW456L13_1841	0.19	-1.1
2,030,434	-		PfGW456L13_1841	0.19	-0.3
2,030,434	-		PfGW456L13_1841	0.19	-0.2
2,030,434	-		PfGW456L13_1841	0.19	-1.3
2,030,437	+		PfGW456L13_1841	0.20	-2.6
2,030,437	+		PfGW456L13_1841	0.20	+0.2
2,030,438	-		PfGW456L13_1841	0.20	-0.4
2,030,438	-		PfGW456L13_1841	0.20	-0.1
2,030,438	-		PfGW456L13_1841	0.20	-2.8
2,030,721	+		PfGW456L13_1841	0.53	-0.5
2,030,721	+		PfGW456L13_1841	0.53	-1.9
2,030,722	-		PfGW456L13_1841	0.54	+0.8
2,030,728	+		PfGW456L13_1841	0.54	-0.1
2,030,728	+		PfGW456L13_1841	0.54	+0.5
2,030,788	+		PfGW456L13_1841	0.61	-0.4
2,030,813	-		PfGW456L13_1841	0.64	-0.5
2,030,813	-		PfGW456L13_1841	0.64	+0.4
2,030,829	+		PfGW456L13_1841	0.66	-1.6
2,030,830	-		PfGW456L13_1841	0.66	-0.1
2,030,841	-		PfGW456L13_1841	0.68	-1.0
2,030,874	+		PfGW456L13_1841	0.72	-0.8
2,030,874	+		PfGW456L13_1841	0.72	-1.2
2,030,901	+		PfGW456L13_1841	0.75	-0.7
2,030,902	-		PfGW456L13_1841	0.75	-0.5
2,030,902	-		PfGW456L13_1841	0.75	-0.8
2,030,935	+		PfGW456L13_1841	0.79	-0.5
2,030,979	+		PfGW456L13_1841	0.84	+0.6
2,030,980	-		PfGW456L13_1841	0.84	+0.5
2,030,994	-		PfGW456L13_1841	0.86	-0.4
2,031,024	+		PfGW456L13_1841	0.89	-1.5
2,031,058	+				+1.2
2,031,059	-				+1.0
2,031,174	-				-0.3
2,031,244	-				-0.6
2,031,244	-				-3.5
2,031,244	-				-1.1
2,031,352	-				-1.6
2,031,392	+		PfGW456L13_1842	0.10	-3.0
2,031,392	+		PfGW456L13_1842	0.10	-1.6
2,031,392	+		PfGW456L13_1842	0.10	-2.1
2,031,392	+		PfGW456L13_1842	0.10	-1.3
2,031,392	+		PfGW456L13_1842	0.10	-2.4
2,031,392	+		PfGW456L13_1842	0.10	-0.6
2,031,392	+		PfGW456L13_1842	0.10	-3.1
2,031,393	-		PfGW456L13_1842	0.10	-1.7
2,031,393	-		PfGW456L13_1842	0.10	+0.0
2,031,393	-		PfGW456L13_1842	0.10	-0.6
2,031,393	-		PfGW456L13_1842	0.10	-0.1
2,031,437	+		PfGW456L13_1842	0.13	-2.2
2,031,437	+		PfGW456L13_1842	0.13	+0.7
2,031,449	+		PfGW456L13_1842	0.14	-1.0
2,031,449	+		PfGW456L13_1842	0.14	-2.9
2,031,450	-		PfGW456L13_1842	0.14	-0.0
2,031,501	-		PfGW456L13_1842	0.18	-1.7
2,031,534	-		PfGW456L13_1842	0.21	-0.1
2,031,534	-		PfGW456L13_1842	0.21	-3.4
2,031,663	-		PfGW456L13_1842	0.30	-3.8
2,031,663	-		PfGW456L13_1842	0.30	-1.0
2,031,765	+		PfGW456L13_1842	0.38	-2.4
2,031,803	+		PfGW456L13_1842	0.41	-1.6
2,031,803	+		PfGW456L13_1842	0.41	+1.3
2,031,803	+		PfGW456L13_1842	0.41	-2.0
2,031,803	+		PfGW456L13_1842	0.41	-1.6
2,031,803	+		PfGW456L13_1842	0.41	-1.4
2,031,803	+		PfGW456L13_1842	0.41	-2.4
2,031,803	+		PfGW456L13_1842	0.41	-1.3
2,031,804	-		PfGW456L13_1842	0.41	+0.0
2,031,804	-		PfGW456L13_1842	0.41	+0.4
2,031,804	-		PfGW456L13_1842	0.41	-3.1
2,031,804	-		PfGW456L13_1842	0.41	-1.2
2,031,804	-		PfGW456L13_1842	0.41	-1.8
2,031,804	-		PfGW456L13_1842	0.41	-3.4
2,031,804	-		PfGW456L13_1842	0.41	-1.3
2,031,811	-		PfGW456L13_1842	0.41	-2.4
2,031,854	+		PfGW456L13_1842	0.44	-2.3
2,031,854	+		PfGW456L13_1842	0.44	-0.3
2,031,854	+		PfGW456L13_1842	0.44	-1.9
2,031,854	+		PfGW456L13_1842	0.44	-1.8
2,031,855	-		PfGW456L13_1842	0.44	-0.6
2,031,869	+		PfGW456L13_1842	0.46	-2.4
2,031,870	-		PfGW456L13_1842	0.46	-3.0
2,031,938	+		PfGW456L13_1842	0.51	-1.6
2,031,954	-		PfGW456L13_1842	0.52	-0.3
2,031,984	-		PfGW456L13_1842	0.54	-1.3
2,032,293	+		PfGW456L13_1842	0.77	-3.3
2,032,370	+		PfGW456L13_1842	0.83	-1.0
2,032,382	+		PfGW456L13_1842	0.84	-1.1
2,032,382	+		PfGW456L13_1842	0.84	-1.6
2,032,382	+		PfGW456L13_1842	0.84	-0.7
2,032,382	+		PfGW456L13_1842	0.84	-1.4
2,032,382	+		PfGW456L13_1842	0.84	-0.9
2,032,382	+		PfGW456L13_1842	0.84	-2.8
2,032,383	-		PfGW456L13_1842	0.84	-3.0
2,032,383	-		PfGW456L13_1842	0.84	-1.8
2,032,383	-		PfGW456L13_1842	0.84	-1.7
2,032,383	-		PfGW456L13_1842	0.84	+0.4
2,032,383	-		PfGW456L13_1842	0.84	-1.0
2,032,383	-		PfGW456L13_1842	0.84	-1.2
2,032,383	-		PfGW456L13_1842	0.84	-2.1
2,032,383	-		PfGW456L13_1842	0.84	-1.8
2,032,451	+		PfGW456L13_1842	0.89	-2.0
2,032,451	+		PfGW456L13_1842	0.89	-1.3
2,032,452	-		PfGW456L13_1842	0.89	-0.8
2,032,454	+				-0.3
2,032,454	+		PfGW456L13_1842	0.89	-1.0
2,032,454	+		PfGW456L13_1842	0.89	-4.0
2,032,455	-		PfGW456L13_1842	0.89	-1.6
2,032,455	-		PfGW456L13_1842	0.89	-3.1
2,032,520	-				-0.6
2,032,520	-				-2.9
2,032,520	-				-2.1
2,032,633	-				+1.6
2,032,653	-				-1.1
2,032,653	-				-0.2
2,032,656	-				-0.1
2,032,693	+				-0.8
2,032,693	+				-0.4
2,032,693	+				-1.0
2,032,694	-				-0.2
2,032,694	-				+0.1
2,032,694	-				+0.0
2,032,694	-				+0.6
2,032,694	-				-1.1
2,032,695	+				-2.1
2,032,696	-				-0.3
2,032,696	-				-1.3
2,032,696	-				+0.6
2,032,696	-				-0.7
2,032,696	-				-1.1
2,032,696	-				-1.8
2,032,718	+				+1.4
2,032,731	-				+0.2
2,032,731	-				+0.5
2,032,731	-				+0.2
2,032,731	-				-0.7
2,032,772	+				-2.9
2,032,772	+				-2.3
2,032,772	+				-2.5
2,032,773	-				+0.3
2,032,773	-				+0.9
2,032,773	-				+0.4
2,032,818	+				-1.1
2,032,819	-				-0.5
2,032,819	-				+0.6
2,032,819	-				+0.9
2,032,819	-				-1.0
2,033,005	+				-1.6
2,033,005	+				+0.3
2,033,025	+				-1.6
2,033,026	-				-0.3
2,033,061	+				-2.0
2,033,062	-				+0.0
2,033,062	-				-0.5
2,033,133	+				-0.7
2,033,156	+				-0.2
2,033,156	+				-3.6
2,033,157	-				-0.8
2,033,227	-				-0.3
2,033,318	+				-1.2
2,033,428	+				-1.8
2,033,428	+				-2.4
2,033,428	+				-0.3
2,033,428	+				-0.9
2,033,428	+				-0.2
2,033,429	-				+0.4
2,033,429	-				+0.1
2,033,429	-				+0.3
2,033,429	-				-0.3
2,033,429	-				-0.7
2,033,429	-				+0.3
2,033,429	-				-0.4
2,033,504	+				+0.4
2,033,504	+				-1.3
2,033,522	+				-0.3
2,033,522	+				+0.0
2,033,522	+				-1.6
2,033,523	-				-1.7
2,033,523	-				-0.0
2,033,523	-				+0.4