Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1181

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
1,314,246	+		PfGW456L13_1180	0.82	-0.3
1,314,246	+		PfGW456L13_1180	0.82	+0.5
1,314,246	+		PfGW456L13_1180	0.82	-0.5
1,314,246	+		PfGW456L13_1180	0.82	-2.0
1,314,246	+		PfGW456L13_1180	0.82	-0.7
1,314,247	-		PfGW456L13_1180	0.82	+0.3
1,314,247	-		PfGW456L13_1180	0.82	+0.9
1,314,247	-		PfGW456L13_1180	0.82	-2.9
1,314,300	+		PfGW456L13_1180	0.87	+0.1
1,314,300	+				-1.0
1,314,300	+		PfGW456L13_1180	0.87	-0.1
1,314,300	+		PfGW456L13_1180	0.87	-0.7
1,314,300	+		PfGW456L13_1180	0.87	-1.0
1,314,300	+		PfGW456L13_1180	0.87	-0.2
1,314,300	+		PfGW456L13_1180	0.87	+0.9
1,314,300	+		PfGW456L13_1180	0.87	-0.8
1,314,300	+		PfGW456L13_1180	0.87	+0.2
1,314,300	+		PfGW456L13_1180	0.87	-0.1
1,314,301	-		PfGW456L13_1180	0.88	+0.5
1,314,301	-		PfGW456L13_1180	0.88	-2.0
1,314,301	-		PfGW456L13_1180	0.88	-0.5
1,314,301	-		PfGW456L13_1180	0.88	-1.0
1,314,301	-		PfGW456L13_1180	0.88	-0.8
1,314,301	-		PfGW456L13_1180	0.88	-1.3
1,314,301	-		PfGW456L13_1180	0.88	-0.0
1,314,441	+				+0.3
1,314,441	+				+1.1
1,314,442	-				+1.0
1,314,453	+				-0.2
1,314,453	+				+0.7
1,314,453	+				-0.1
1,314,453	+				-0.2
1,314,454	-				+0.1
1,314,454	-				+1.0
1,314,454	-				-0.1
1,314,457	+				+2.1
1,314,457	+				-1.0
1,314,457	+				+0.8
1,314,457	+				-0.4
1,314,457	+				+0.1
1,314,458	-				-0.4
1,314,458	-				-0.8
1,314,458	-				-2.2
1,314,499	+				+0.4
1,314,500	-				+0.7
1,314,511	+				-0.4
1,314,512	-				-1.5
1,314,537	+				-0.1
1,314,538	-				+0.2
1,314,538	-				+0.8
1,314,538	-				-0.5
1,314,609	+				-0.0
1,314,609	+				+0.8
1,314,609	+				+1.4
1,314,610	-				-0.8
1,314,659	+				-1.2
1,314,659	+				+0.4
1,314,660	-				-1.2
1,314,660	-				+0.3
1,314,660	-				+0.4
1,314,660	-				-0.3
1,314,662	+				+0.7
1,314,662	+				-1.0
1,314,662	+				-1.2
1,314,662	+				-1.2
1,314,663	-				-1.6
1,314,663	-				+0.1
1,314,663	-				+1.2
1,314,758	-				-0.8
1,314,791	+				+0.4
1,314,899	+				+0.0
1,314,952	+				+0.8
1,315,001	-				-0.4
1,315,012	+				+0.5
1,315,013	-				-1.5
1,315,013	-				-2.7
1,315,013	-				+0.4
1,315,020	+				-0.3
1,315,026	+				+0.9
1,315,085	+				+0.2
1,315,085	+				-1.2
1,315,150	-				+0.3
1,315,150	-				+0.1
1,315,150	-				-0.3
1,315,156	+				-0.4
1,315,156	+				-1.6
1,315,156	+				-0.1
1,315,157	-				-0.2
1,315,185	-		PfGW456L13_1181	0.16	-1.3
1,315,199	+		PfGW456L13_1181	0.25	-1.8
1,315,253	-		PfGW456L13_1181	0.56	-0.6
1,315,325	+				-0.0
1,315,326	-				+1.7
1,315,326	-				+0.1
1,315,361	+				-2.5
1,315,362	-				-0.6
1,315,362	-				+0.5
1,315,366	-				-0.1
1,315,473	+				-0.1
1,315,518	+				-0.3
1,315,596	+				+0.4
1,315,596	+				+0.0
1,315,597	-				+0.1
1,315,597	-				-1.0
1,315,597	-				-0.6
1,315,597	-				-1.2
1,315,597	-				+0.1
1,315,651	+				-1.3
1,315,652	-				-0.8
1,315,652	-				-1.5
1,315,665	+				+0.9
1,315,666	-				-0.5
1,315,666	-				+0.0
1,315,727	+				-0.7
1,315,728	-				-2.5
1,315,747	+				+1.2
1,315,747	+				-0.3
1,315,748	-				-0.8
1,315,748	-				+0.9
1,315,748	-				+0.1
1,315,748	-				+0.0
1,315,773	+				-0.3
1,315,773	+				-1.0
1,315,774	-				+0.4
1,315,774	-				+0.8
1,315,797	+				-0.4
1,315,804	+				+0.2
1,315,804	+				+1.5
1,315,804	+				+0.9
1,315,804	+				+0.4
1,315,804	+				-1.0
1,315,805	-				-2.1
1,315,805	-				-1.8
1,315,805	-				+0.7
1,315,805	-				+1.0
1,315,805	-				+0.6
1,315,805	-				-0.3
1,315,805	-				+0.5
1,315,805	-				-0.3
1,315,805	-				-1.2
1,315,805	-				-0.2
1,315,806	+				+0.7
1,315,806	+				+1.3
1,315,806	+				+1.1
1,315,806	+				+0.4
1,315,806	+				+0.7
1,315,806	+				+0.4
1,315,806	+				+0.3
1,315,807	-				-0.2
1,315,807	-				-1.0
1,315,807	-				+0.5
1,315,859	+				-0.2
1,315,859	+				+0.2
1,315,859	+				+0.3
1,315,860	-				-0.1
1,315,860	-				-0.5
1,315,921	+				+0.2
1,315,921	+				+0.2
1,315,921	+				+1.1
1,316,083	+				+0.0
1,316,093	+				+0.4
1,316,093	+				-0.5
1,316,093	+				+0.4
1,316,093	+				-1.3
1,316,094	-				-0.4
1,316,126	+		PfGW456L13_1183	0.15	+1.1
1,316,126	+		PfGW456L13_1183	0.15	-0.9
1,316,126	+		PfGW456L13_1183	0.15	+0.5
1,316,127	-		PfGW456L13_1183	0.15	-0.2
1,316,127	-		PfGW456L13_1183	0.15	-0.1
1,316,127	-		PfGW456L13_1183	0.15	+0.3
1,316,213	+		PfGW456L13_1183	0.36	+0.6
1,316,213	+		PfGW456L13_1183	0.36	+0.2
1,316,213	+		PfGW456L13_1183	0.36	+0.5
1,316,213	+		PfGW456L13_1183	0.36	+0.6
1,316,214	-		PfGW456L13_1183	0.36	-1.1
1,316,214	-		PfGW456L13_1183	0.36	+1.4
1,316,214	-		PfGW456L13_1183	0.36	+0.7
1,316,214	-		PfGW456L13_1183	0.36	+2.9
1,316,214	-		PfGW456L13_1183	0.36	+0.6
1,316,216	+		PfGW456L13_1183	0.37	+1.0
1,316,216	+		PfGW456L13_1183	0.37	+0.4
1,316,216	+		PfGW456L13_1183	0.37	-0.3
1,316,216	+		PfGW456L13_1183	0.37	-0.1
1,316,216	+		PfGW456L13_1183	0.37	-0.5
1,316,216	+		PfGW456L13_1183	0.37	+0.1
1,316,216	+		PfGW456L13_1183	0.37	-0.1
1,316,216	+		PfGW456L13_1183	0.37	+0.1
1,316,216	+		PfGW456L13_1183	0.37	-0.1
1,316,216	+		PfGW456L13_1183	0.37	+0.1
1,316,217	-		PfGW456L13_1183	0.37	+0.6
1,316,217	-		PfGW456L13_1183	0.37	+0.1
1,316,217	-		PfGW456L13_1183	0.37	+0.4
1,316,217	-		PfGW456L13_1183	0.37	-0.6
1,316,217	-		PfGW456L13_1183	0.37	+0.3
1,316,217	-		PfGW456L13_1183	0.37	+0.0
1,316,217	-		PfGW456L13_1183	0.37	-0.0
1,316,217	-		PfGW456L13_1183	0.37	-0.8
1,316,217	-		PfGW456L13_1183	0.37	-0.6
1,316,259	+		PfGW456L13_1183	0.47	-0.2
1,316,309	+		PfGW456L13_1183	0.60	+0.2