Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21145 and PS417_21150 are separated by 132 nucleotides PS417_21150 and PS417_21155 are separated by 107 nucleotides PS417_21155 and PS417_21160 overlap by 41 nucleotides
PS417_21145: PS417_21145 - oxidoreductase, at 4,601,260 to 4,602,006
_21145
PS417_21150: PS417_21150 - HAD family hydrolase, at 4,602,139 to 4,602,828
_21150
PS417_21155: PS417_21155 - hypothetical protein, at 4,602,936 to 4,603,319
_21155
PS417_21160: PS417_21160 - membrane protein, at 4,603,279 to 4,604,247
_21160
Position (kb) 4602
4603
4604 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4601.936 kb on - strand at 4601.959 kb on + strand at 4602.008 kb on - strand at 4602.077 kb on - strand at 4602.088 kb on + strand at 4602.089 kb on - strand at 4602.215 kb on + strand, within PS417_21150 at 4602.216 kb on - strand, within PS417_21150 at 4602.589 kb on + strand, within PS417_21150 at 4602.641 kb on + strand, within PS417_21150 at 4602.641 kb on + strand, within PS417_21150 at 4602.641 kb on + strand, within PS417_21150 at 4602.641 kb on + strand, within PS417_21150 at 4602.641 kb on + strand, within PS417_21150 at 4602.642 kb on - strand, within PS417_21150 at 4602.744 kb on - strand, within PS417_21150 at 4602.902 kb on + strand at 4602.903 kb on - strand at 4602.909 kb on + strand at 4602.909 kb on + strand at 4602.909 kb on + strand at 4602.910 kb on - strand at 4602.910 kb on - strand at 4602.910 kb on - strand at 4602.910 kb on - strand at 4602.910 kb on - strand at 4603.176 kb on + strand, within PS417_21155 at 4603.176 kb on + strand, within PS417_21155 at 4603.176 kb on + strand, within PS417_21155 at 4603.176 kb on + strand, within PS417_21155 at 4603.176 kb on + strand at 4603.176 kb on + strand, within PS417_21155 at 4603.177 kb on - strand, within PS417_21155 at 4603.177 kb on - strand, within PS417_21155 at 4603.177 kb on - strand, within PS417_21155 at 4603.177 kb on - strand, within PS417_21155 at 4603.194 kb on + strand, within PS417_21155 at 4603.267 kb on - strand, within PS417_21155 at 4603.267 kb on - strand, within PS417_21155 at 4603.267 kb on - strand, within PS417_21155 at 4603.317 kb on + strand at 4603.317 kb on + strand at 4603.318 kb on - strand at 4603.318 kb on - strand at 4603.318 kb on - strand at 4603.318 kb on - strand at 4603.318 kb on - strand at 4603.318 kb on - strand at 4603.318 kb on - strand at 4603.412 kb on + strand, within PS417_21160 at 4603.642 kb on + strand, within PS417_21160 at 4603.642 kb on + strand, within PS417_21160 at 4603.656 kb on - strand, within PS417_21160 at 4603.917 kb on - strand, within PS417_21160 at 4603.922 kb on + strand, within PS417_21160 at 4603.939 kb on + strand, within PS417_21160 at 4603.940 kb on - strand, within PS417_21160 at 4603.944 kb on + strand, within PS417_21160 at 4604.113 kb on - strand, within PS417_21160 at 4604.231 kb on - strand at 4604.299 kb on - strand at 4604.299 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,601,936 - +0.3 4,601,959 + +0.4 4,602,008 - +0.0 4,602,077 - +0.1 4,602,088 + +0.5 4,602,089 - -0.7 4,602,215 + PS417_21150 0.11 -0.6 4,602,216 - PS417_21150 0.11 +0.2 4,602,589 + PS417_21150 0.65 +0.0 4,602,641 + PS417_21150 0.73 +0.5 4,602,641 + PS417_21150 0.73 +0.4 4,602,641 + PS417_21150 0.73 +2.2 4,602,641 + PS417_21150 0.73 -0.0 4,602,641 + PS417_21150 0.73 +0.1 4,602,642 - PS417_21150 0.73 -0.0 4,602,744 - PS417_21150 0.88 -1.2 4,602,902 + +0.1 4,602,903 - +0.6 4,602,909 + +0.5 4,602,909 + -0.2 4,602,909 + +0.2 4,602,910 - -0.1 4,602,910 - +0.6 4,602,910 - +0.8 4,602,910 - +1.1 4,602,910 - +0.6 4,603,176 + PS417_21155 0.62 -0.5 4,603,176 + PS417_21155 0.62 +0.4 4,603,176 + PS417_21155 0.62 -0.8 4,603,176 + PS417_21155 0.62 -0.2 4,603,176 + +1.8 4,603,176 + PS417_21155 0.62 -0.1 4,603,177 - PS417_21155 0.63 -0.0 4,603,177 - PS417_21155 0.63 +0.2 4,603,177 - PS417_21155 0.63 -0.2 4,603,177 - PS417_21155 0.63 +0.4 4,603,194 + PS417_21155 0.67 -0.3 4,603,267 - PS417_21155 0.86 -0.4 4,603,267 - PS417_21155 0.86 +0.2 4,603,267 - PS417_21155 0.86 +0.0 4,603,317 + +0.9 4,603,317 + -0.2 4,603,318 - -0.2 4,603,318 - -1.9 4,603,318 - -0.2 4,603,318 - -0.2 4,603,318 - -0.4 4,603,318 - +0.1 4,603,318 - -0.1 4,603,412 + PS417_21160 0.14 +0.1 4,603,642 + PS417_21160 0.37 +0.4 4,603,642 + PS417_21160 0.37 +0.8 4,603,656 - PS417_21160 0.39 -0.2 4,603,917 - PS417_21160 0.66 -0.0 4,603,922 + PS417_21160 0.66 -1.0 4,603,939 + PS417_21160 0.68 +0.2 4,603,940 - PS417_21160 0.68 -0.8 4,603,944 + PS417_21160 0.69 -0.8 4,604,113 - PS417_21160 0.86 +0.8 4,604,231 - -0.5 4,604,299 - +0.3 4,604,299 - -0.3
Or see this region's nucleotide sequence