Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18245 and PS417_18250 are separated by 18 nucleotides PS417_18250 and PS417_18255 are separated by 69 nucleotides
PS417_18245: PS417_18245 - hypothetical protein, at 3,975,054 to 3,976,313
_18245
PS417_18250: PS417_18250 - chemotaxis protein, at 3,976,332 to 3,977,624
_18250
PS417_18255: PS417_18255 - AMP-binding protein, at 3,977,694 to 3,979,334
_18255
Position (kb)
3976
3977
3978 Strain fitness (log2 ratio)
-2
-1
0
1 at 3975.562 kb on + strand, within PS417_18245 at 3975.591 kb on + strand, within PS417_18245 at 3975.592 kb on - strand, within PS417_18245 at 3975.831 kb on + strand, within PS417_18245 at 3975.831 kb on + strand, within PS417_18245 at 3975.831 kb on + strand, within PS417_18245 at 3975.832 kb on - strand, within PS417_18245 at 3976.014 kb on + strand, within PS417_18245 at 3976.014 kb on + strand, within PS417_18245 at 3976.014 kb on + strand, within PS417_18245 at 3976.014 kb on + strand, within PS417_18245 at 3976.160 kb on + strand, within PS417_18245 at 3976.160 kb on + strand, within PS417_18245 at 3976.160 kb on + strand, within PS417_18245 at 3976.160 kb on + strand, within PS417_18245 at 3976.161 kb on - strand, within PS417_18245 at 3976.161 kb on - strand, within PS417_18245 at 3976.320 kb on + strand at 3976.739 kb on - strand, within PS417_18250 at 3976.903 kb on + strand, within PS417_18250 at 3976.904 kb on - strand, within PS417_18250 at 3977.259 kb on - strand, within PS417_18250 at 3977.272 kb on - strand, within PS417_18250 at 3977.668 kb on + strand at 3977.677 kb on + strand at 3977.678 kb on - strand at 3977.689 kb on - strand at 3978.019 kb on - strand, within PS417_18255 at 3978.272 kb on + strand, within PS417_18255 at 3978.272 kb on + strand, within PS417_18255 at 3978.342 kb on + strand, within PS417_18255 at 3978.344 kb on + strand, within PS417_18255 at 3978.344 kb on + strand, within PS417_18255 at 3978.344 kb on + strand, within PS417_18255 at 3978.345 kb on - strand, within PS417_18255 at 3978.411 kb on + strand, within PS417_18255 at 3978.420 kb on + strand, within PS417_18255 at 3978.421 kb on - strand, within PS417_18255 at 3978.424 kb on - strand, within PS417_18255 at 3978.516 kb on + strand, within PS417_18255 at 3978.517 kb on - strand, within PS417_18255 at 3978.517 kb on - strand, within PS417_18255
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 3,975,562 + PS417_18245 0.40 +0.2 3,975,591 + PS417_18245 0.43 -1.3 3,975,592 - PS417_18245 0.43 +0.1 3,975,831 + PS417_18245 0.62 +0.3 3,975,831 + PS417_18245 0.62 +0.7 3,975,831 + PS417_18245 0.62 +0.6 3,975,832 - PS417_18245 0.62 -0.3 3,976,014 + PS417_18245 0.76 +1.3 3,976,014 + PS417_18245 0.76 +0.1 3,976,014 + PS417_18245 0.76 +0.5 3,976,014 + PS417_18245 0.76 -0.2 3,976,160 + PS417_18245 0.88 -0.1 3,976,160 + PS417_18245 0.88 -0.8 3,976,160 + PS417_18245 0.88 +0.3 3,976,160 + PS417_18245 0.88 -0.1 3,976,161 - PS417_18245 0.88 -0.3 3,976,161 - PS417_18245 0.88 +0.3 3,976,320 + +0.1 3,976,739 - PS417_18250 0.31 -0.1 3,976,903 + PS417_18250 0.44 -0.8 3,976,904 - PS417_18250 0.44 -1.3 3,977,259 - PS417_18250 0.72 -1.1 3,977,272 - PS417_18250 0.73 +1.7 3,977,668 + +0.1 3,977,677 + +0.1 3,977,678 - +1.1 3,977,689 - +0.1 3,978,019 - PS417_18255 0.20 +0.6 3,978,272 + PS417_18255 0.35 -0.1 3,978,272 + PS417_18255 0.35 -1.0 3,978,342 + PS417_18255 0.39 +0.4 3,978,344 + PS417_18255 0.40 +0.3 3,978,344 + PS417_18255 0.40 +0.2 3,978,344 + PS417_18255 0.40 -2.0 3,978,345 - PS417_18255 0.40 +0.1 3,978,411 + PS417_18255 0.44 +0.2 3,978,420 + PS417_18255 0.44 -1.3 3,978,421 - PS417_18255 0.44 -0.1 3,978,424 - PS417_18255 0.44 -0.0 3,978,516 + PS417_18255 0.50 -0.3 3,978,517 - PS417_18255 0.50 -0.1 3,978,517 - PS417_18255 0.50 +0.2
Or see this region's nucleotide sequence