Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1225

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,403,538	+		Echvi_1223	0.62	+0.4
1,403,571	+		Echvi_1223	0.67	-0.1
1,403,571	+		Echvi_1223	0.67	+0.6
1,403,572	-		Echvi_1223	0.67	+1.0
1,403,572	-		Echvi_1223	0.67	+0.2
1,403,573	+		Echvi_1223	0.67	+0.1
1,403,573	+		Echvi_1223	0.67	+1.2
1,403,573	+		Echvi_1223	0.67	-0.3
1,403,633	+		Echvi_1223	0.77	+0.1
1,403,634	-		Echvi_1223	0.77	-0.2
1,403,634	-		Echvi_1223	0.77	-0.1
1,403,649	+		Echvi_1223	0.80	-0.2
1,403,649	+		Echvi_1223	0.80	-0.3
1,403,650	-		Echvi_1223	0.80	-2.1
1,403,694	+		Echvi_1223	0.87	-2.4
1,403,695	-		Echvi_1223	0.88	+1.6
1,403,717	+				-1.3
1,403,759	+				-1.8
1,403,759	+				+0.6
1,403,761	+				-0.8
1,403,761	+				+0.6
1,403,761	+				-0.3
1,403,761	+				-0.6
1,403,761	+				-2.0
1,403,761	+				+3.0
1,403,762	-				+0.4
1,403,762	-				+0.5
1,403,762	-				-0.3
1,403,762	-				+0.1
1,403,762	-				-0.0
1,403,762	-				-1.0
1,403,762	-				+0.1
1,403,762	-				-0.4
1,403,762	-				+0.2
1,403,784	+				-0.1
1,403,784	+				+0.5
1,403,791	+				+0.9
1,403,797	+				+0.3
1,403,798	-				+0.4
1,403,812	+				+1.4
1,403,813	-				-1.0
1,403,813	-				-0.1
1,403,830	+				+1.0
1,403,859	+				-0.5
1,403,927	-		Echvi_1224	0.11	+0.3
1,403,947	+		Echvi_1224	0.15	-0.0
1,403,948	-		Echvi_1224	0.15	+0.3
1,404,045	+		Echvi_1224	0.31	+0.8
1,404,045	+		Echvi_1224	0.31	+1.2
1,404,046	-		Echvi_1224	0.32	-1.0
1,404,046	-		Echvi_1224	0.32	+0.0
1,404,046	-		Echvi_1224	0.32	+0.2
1,404,052	-		Echvi_1224	0.33	+0.2
1,404,052	-		Echvi_1224	0.33	+0.7
1,404,085	+		Echvi_1224	0.38	+0.7
1,404,118	+		Echvi_1224	0.44	+0.5
1,404,118	+		Echvi_1224	0.44	-0.3
1,404,118	+		Echvi_1224	0.44	-0.2
1,404,118	+		Echvi_1224	0.44	+0.4
1,404,119	-		Echvi_1224	0.44	-0.3
1,404,119	-		Echvi_1224	0.44	+0.4
1,404,121	-		Echvi_1224	0.45	+0.8
1,404,126	+		Echvi_1224	0.45	+0.1
1,404,205	+		Echvi_1224	0.59	+0.7
1,404,205	+		Echvi_1224	0.59	-1.1
1,404,206	-		Echvi_1224	0.59	+1.4
1,404,206	-		Echvi_1224	0.59	-0.3
1,404,206	-		Echvi_1224	0.59	-0.1
1,404,244	+		Echvi_1224	0.66	-0.6
1,404,244	+		Echvi_1224	0.66	+0.8
1,404,244	+		Echvi_1224	0.66	+0.4
1,404,267	-		Echvi_1224	0.70	+1.3
1,404,267	-		Echvi_1224	0.70	+0.6
1,404,267	-		Echvi_1224	0.70	+0.7
1,404,267	-		Echvi_1224	0.70	+1.0
1,404,283	-		Echvi_1224	0.73	-0.1
1,404,283	-		Echvi_1224	0.73	+0.0
1,404,326	+		Echvi_1224	0.80	-0.3
1,404,340	+		Echvi_1224	0.82	+0.0
1,404,341	-		Echvi_1224	0.83	+0.2
1,404,341	-		Echvi_1224	0.83	-2.1
1,404,388	+				+0.9
1,404,388	+				+0.4
1,404,388	+				+0.3
1,404,420	+				+1.0
1,404,420	+				+0.1
1,404,420	+				-0.1
1,404,420	+				+0.3
1,404,421	-				+0.4
1,404,421	-				+0.0
1,404,421	-				-0.1
1,404,421	-				+0.4
1,404,439	+				-1.2
1,404,440	-				-0.6
1,404,487	+				+1.1
1,404,487	+				-0.0
1,404,491	+				-0.4
1,404,492	-				-0.3
1,404,492	-				+0.8
1,404,522	+				+0.6
1,404,523	-				+1.8
1,404,543	-				-1.0
1,404,600	-				+0.0
1,404,600	-				+1.0
1,404,657	+				-1.3
1,404,657	+				+0.3
1,404,658	-				-0.1
1,404,799	-		Echvi_1225	0.19	+0.1
1,404,800	+		Echvi_1225	0.19	-0.1
1,404,806	+		Echvi_1225	0.19	-0.8
1,404,819	+		Echvi_1225	0.20	-0.1
1,404,819	+		Echvi_1225	0.20	+0.2
1,404,819	+		Echvi_1225	0.20	-1.3
1,404,878	-		Echvi_1225	0.24	-0.0
1,404,886	-		Echvi_1225	0.24	-0.6
1,404,907	+		Echvi_1225	0.25	-0.1
1,404,939	+		Echvi_1225	0.27	-0.2
1,404,940	-				+0.2
1,404,958	-		Echvi_1225	0.28	-0.1
1,405,100	-		Echvi_1225	0.37	-0.2
1,405,100	-		Echvi_1225	0.37	-1.8
1,405,118	-		Echvi_1225	0.38	+1.0
1,405,118	-		Echvi_1225	0.38	-1.9
1,405,130	+		Echvi_1225	0.39	+0.2
1,405,130	+		Echvi_1225	0.39	-0.5
1,405,152	-		Echvi_1225	0.40	+0.3
1,405,434	+		Echvi_1225	0.58	-0.1
1,405,456	+		Echvi_1225	0.59	-0.2
1,405,484	+		Echvi_1225	0.61	-1.0
1,405,485	-		Echvi_1225	0.61	-0.3
1,405,510	+		Echvi_1225	0.62	-0.0
1,405,510	+		Echvi_1225	0.62	-0.7
1,405,512	+		Echvi_1225	0.63	+0.4
1,405,512	+		Echvi_1225	0.63	-2.9
1,405,512	+		Echvi_1225	0.63	-0.3
1,405,513	-		Echvi_1225	0.63	-1.4
1,405,561	-		Echvi_1225	0.66	-1.9
1,405,569	+		Echvi_1225	0.66	-1.9
1,405,609	+		Echvi_1225	0.69	-0.8
1,405,609	+		Echvi_1225	0.69	-0.3
1,405,610	-		Echvi_1225	0.69	-0.8
1,405,610	-		Echvi_1225	0.69	+0.0
1,405,666	-		Echvi_1225	0.72	-0.6
1,405,918	+		Echvi_1225	0.88	-0.9
1,405,918	+		Echvi_1225	0.88	-0.3
1,405,934	+		Echvi_1225	0.89	+0.1
1,405,935	-		Echvi_1225	0.89	+0.7
1,405,977	-				+0.1
1,405,977	-				-0.4
1,405,989	+				-0.1
1,405,990	-				-0.0
1,406,057	+				+2.7
1,406,057	+				+0.3
1,406,058	-				-0.7
1,406,058	-				+0.2
1,406,058	-				-0.3
1,406,117	-				+0.3
1,406,117	-				+0.3
1,406,180	+				-0.5
1,406,181	-				-0.1
1,406,213	-				-0.4
1,406,218	+				+1.0
1,406,218	+				+0.4
1,406,285	+				+1.1
1,406,285	+				-1.2
1,406,285	+				-1.6
1,406,286	-				+2.7
1,406,304	-				+0.4
1,406,309	+				+0.3
1,406,310	-				+1.0
1,406,367	+				-0.1
1,406,372	-				-0.7
1,406,372	-				-0.7
1,406,406	+				-0.6
1,406,406	+				+1.2
1,406,407	-				+1.7
1,406,465	-				+2.0
1,406,465	-				-0.3
1,406,497	+				-0.2
1,406,562	+		Echvi_1226	0.11	-0.6
1,406,563	-		Echvi_1226	0.11	-1.1
1,406,572	+		Echvi_1226	0.11	+0.3
1,406,701	-		Echvi_1226	0.19	+2.5
1,406,708	-		Echvi_1226	0.19	-0.0
1,406,722	+		Echvi_1226	0.20	-0.1
1,406,723	-		Echvi_1226	0.20	+0.6
1,406,730	-		Echvi_1226	0.20	-1.3
1,406,750	+		Echvi_1226	0.21	-0.5
1,406,750	+		Echvi_1226	0.21	-0.0
1,406,750	+		Echvi_1226	0.21	+2.2
1,406,751	-		Echvi_1226	0.21	-1.6
1,406,753	+		Echvi_1226	0.21	+0.2
1,406,768	+		Echvi_1226	0.22	-1.6
1,406,768	+		Echvi_1226	0.22	+1.4
1,406,961	+		Echvi_1226	0.33	-1.9
1,406,985	+		Echvi_1226	0.35	+0.8
1,407,029	-		Echvi_1226	0.37	+0.1
1,407,046	+		Echvi_1226	0.38	-0.3
1,407,047	-		Echvi_1226	0.38	-1.0
1,407,047	-		Echvi_1226	0.38	+0.4
1,407,047	-		Echvi_1226	0.38	-0.2
1,407,047	-		Echvi_1226	0.38	-1.8
1,407,081	-		Echvi_1226	0.40	+1.2
1,407,111	+		Echvi_1226	0.42	+0.6
1,407,112	-		Echvi_1226	0.42	-0.5
1,407,112	-		Echvi_1226	0.42	+0.1