Experiment: m.b. Spectinomycin 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21330 and CA264_21335 are separated by 79 nucleotides CA264_21335 and CA264_21340 are separated by 79 nucleotides CA264_21340 and CA264_21345 are separated by 201 nucleotides
CA264_21330: CA264_21330 - MBL fold metallo-hydrolase, at 130,050 to 131,405
_21330
CA264_21335: CA264_21335 - hypothetical protein, at 131,485 to 131,742
_21335
CA264_21340: CA264_21340 - hypothetical protein, at 131,822 to 132,412
_21340
CA264_21345: CA264_21345 - transcriptional regulator, at 132,614 to 132,946
_21345
Position (kb) 131
132 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 130.540 kb on - strand, within CA264_21330 at 130.548 kb on - strand, within CA264_21330 at 130.583 kb on - strand, within CA264_21330 at 130.654 kb on + strand, within CA264_21330 at 130.678 kb on - strand, within CA264_21330 at 130.717 kb on + strand, within CA264_21330 at 130.718 kb on - strand, within CA264_21330 at 130.737 kb on + strand, within CA264_21330 at 130.737 kb on + strand, within CA264_21330 at 130.737 kb on + strand, within CA264_21330 at 130.737 kb on + strand, within CA264_21330 at 130.741 kb on + strand, within CA264_21330 at 130.749 kb on + strand, within CA264_21330 at 130.750 kb on - strand, within CA264_21330 at 130.833 kb on + strand, within CA264_21330 at 130.833 kb on + strand, within CA264_21330 at 130.834 kb on - strand, within CA264_21330 at 130.834 kb on - strand, within CA264_21330 at 130.834 kb on - strand, within CA264_21330 at 130.964 kb on - strand, within CA264_21330 at 130.964 kb on - strand, within CA264_21330 at 130.984 kb on - strand, within CA264_21330 at 131.346 kb on + strand at 131.353 kb on + strand at 131.354 kb on - strand at 131.415 kb on + strand at 131.420 kb on + strand at 131.427 kb on + strand at 131.430 kb on + strand at 131.431 kb on - strand at 131.431 kb on - strand at 131.432 kb on + strand at 131.433 kb on - strand at 131.433 kb on - strand at 131.490 kb on - strand at 131.588 kb on + strand, within CA264_21335 at 131.589 kb on - strand, within CA264_21335 at 131.620 kb on + strand, within CA264_21335 at 131.773 kb on + strand at 131.815 kb on + strand at 131.884 kb on + strand, within CA264_21340 at 131.889 kb on + strand, within CA264_21340 at 131.889 kb on + strand, within CA264_21340 at 131.891 kb on + strand, within CA264_21340 at 131.892 kb on - strand, within CA264_21340 at 131.897 kb on - strand, within CA264_21340 at 131.903 kb on - strand, within CA264_21340 at 131.903 kb on - strand, within CA264_21340 at 131.908 kb on - strand, within CA264_21340 at 131.914 kb on + strand, within CA264_21340 at 131.914 kb on + strand, within CA264_21340 at 131.915 kb on - strand, within CA264_21340 at 131.915 kb on - strand, within CA264_21340 at 132.047 kb on - strand, within CA264_21340 at 132.047 kb on - strand, within CA264_21340 at 132.118 kb on + strand, within CA264_21340 at 132.131 kb on + strand, within CA264_21340 at 132.132 kb on - strand, within CA264_21340 at 132.132 kb on - strand, within CA264_21340 at 132.206 kb on - strand, within CA264_21340 at 132.298 kb on + strand, within CA264_21340 at 132.406 kb on + strand at 132.411 kb on - strand at 132.419 kb on + strand at 132.420 kb on - strand at 132.420 kb on - strand at 132.420 kb on - strand at 132.420 kb on - strand at 132.420 kb on - strand at 132.537 kb on - strand at 132.542 kb on + strand at 132.549 kb on - strand at 132.549 kb on - strand at 132.568 kb on - strand at 132.568 kb on - strand at 132.605 kb on - strand at 132.643 kb on + strand at 132.644 kb on - strand at 132.644 kb on - strand at 132.652 kb on - strand, within CA264_21345 at 132.703 kb on - strand, within CA264_21345 at 132.731 kb on - strand, within CA264_21345
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.08 mg/ml remove 130,540 - CA264_21330 0.36 +1.7 130,548 - CA264_21330 0.37 +0.6 130,583 - CA264_21330 0.39 -0.9 130,654 + CA264_21330 0.45 -0.7 130,678 - CA264_21330 0.46 +0.1 130,717 + CA264_21330 0.49 -1.0 130,718 - CA264_21330 0.49 -0.0 130,737 + CA264_21330 0.51 -2.6 130,737 + CA264_21330 0.51 -0.6 130,737 + CA264_21330 0.51 -0.9 130,737 + CA264_21330 0.51 +1.7 130,741 + CA264_21330 0.51 -0.3 130,749 + CA264_21330 0.52 -0.9 130,750 - CA264_21330 0.52 -0.5 130,833 + CA264_21330 0.58 -1.6 130,833 + CA264_21330 0.58 -1.3 130,834 - CA264_21330 0.58 -0.9 130,834 - CA264_21330 0.58 +0.7 130,834 - CA264_21330 0.58 -1.6 130,964 - CA264_21330 0.67 -1.5 130,964 - CA264_21330 0.67 -1.9 130,984 - CA264_21330 0.69 -1.4 131,346 + -3.4 131,353 + -1.9 131,354 - +0.0 131,415 + -1.3 131,420 + -1.0 131,427 + -0.4 131,430 + -0.3 131,431 - -1.3 131,431 - -0.3 131,432 + -0.8 131,433 - -0.2 131,433 - -0.1 131,490 - -0.9 131,588 + CA264_21335 0.40 +1.0 131,589 - CA264_21335 0.40 +0.7 131,620 + CA264_21335 0.52 -2.0 131,773 + -0.2 131,815 + -1.1 131,884 + CA264_21340 0.10 -1.1 131,889 + CA264_21340 0.11 +0.5 131,889 + CA264_21340 0.11 -0.2 131,891 + CA264_21340 0.12 -1.9 131,892 - CA264_21340 0.12 -0.2 131,897 - CA264_21340 0.13 +0.2 131,903 - CA264_21340 0.14 +1.0 131,903 - CA264_21340 0.14 -1.0 131,908 - CA264_21340 0.15 -0.0 131,914 + CA264_21340 0.16 -3.4 131,914 + CA264_21340 0.16 -0.6 131,915 - CA264_21340 0.16 +0.1 131,915 - CA264_21340 0.16 +1.3 132,047 - CA264_21340 0.38 -0.3 132,047 - CA264_21340 0.38 +0.5 132,118 + CA264_21340 0.50 +0.7 132,131 + CA264_21340 0.52 -0.8 132,132 - CA264_21340 0.52 +0.3 132,132 - CA264_21340 0.52 +0.3 132,206 - CA264_21340 0.65 -1.3 132,298 + CA264_21340 0.81 -1.9 132,406 + -1.3 132,411 - +0.3 132,419 + -0.6 132,420 - -0.9 132,420 - +0.0 132,420 - +0.2 132,420 - -0.4 132,420 - +0.9 132,537 - -1.5 132,542 + -1.3 132,549 - +1.1 132,549 - -0.3 132,568 - -0.3 132,568 - +0.1 132,605 - +1.0 132,643 + -0.9 132,644 - +0.9 132,644 - +1.0 132,652 - CA264_21345 0.11 +0.2 132,703 - CA264_21345 0.27 -0.3 132,731 - CA264_21345 0.35 +1.5
Or see this region's nucleotide sequence