Experiment: m.b. Spectinomycin 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20895 and CA264_20900 overlap by 1 nucleotides CA264_20900 and CA264_20905 overlap by 4 nucleotides CA264_20905 and CA264_20910 are separated by 146 nucleotides
CA264_20895: CA264_20895 - hypothetical protein, at 44,864 to 45,274
_20895
CA264_20900: CA264_20900 - hypothetical protein, at 45,274 to 45,897
_20900
CA264_20905: CA264_20905 - hypothetical protein, at 45,894 to 46,130
_20905
CA264_20910: CA264_20910 - hypothetical protein, at 46,277 to 47,398
_20910
Position (kb) 45
46
47 Strain fitness (log2 ratio) -2
-1
0
1
2 at 44.907 kb on + strand, within CA264_20895 at 44.945 kb on + strand, within CA264_20895 at 44.945 kb on + strand, within CA264_20895 at 44.946 kb on - strand, within CA264_20895 at 44.962 kb on - strand, within CA264_20895 at 44.962 kb on - strand, within CA264_20895 at 44.993 kb on - strand, within CA264_20895 at 44.993 kb on - strand, within CA264_20895 at 44.995 kb on - strand, within CA264_20895 at 45.214 kb on + strand, within CA264_20895 at 45.286 kb on + strand at 45.342 kb on + strand, within CA264_20900 at 45.347 kb on + strand, within CA264_20900 at 45.378 kb on + strand, within CA264_20900 at 45.379 kb on - strand, within CA264_20900 at 45.379 kb on - strand, within CA264_20900 at 45.399 kb on + strand, within CA264_20900 at 45.524 kb on + strand, within CA264_20900 at 45.525 kb on - strand, within CA264_20900 at 45.525 kb on - strand, within CA264_20900 at 45.596 kb on + strand, within CA264_20900 at 45.597 kb on - strand, within CA264_20900 at 45.638 kb on - strand, within CA264_20900 at 45.740 kb on + strand, within CA264_20900 at 45.838 kb on - strand at 45.880 kb on - strand at 45.880 kb on - strand at 45.894 kb on - strand at 45.968 kb on + strand, within CA264_20905 at 45.969 kb on - strand, within CA264_20905 at 45.969 kb on - strand, within CA264_20905 at 45.969 kb on - strand, within CA264_20905 at 45.974 kb on + strand, within CA264_20905 at 46.045 kb on - strand, within CA264_20905 at 46.047 kb on - strand, within CA264_20905 at 46.154 kb on - strand at 46.182 kb on + strand at 46.211 kb on + strand at 46.211 kb on + strand at 46.276 kb on + strand at 46.277 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.08 mg/ml remove 44,907 + CA264_20895 0.10 -0.8 44,945 + CA264_20895 0.20 +0.8 44,945 + CA264_20895 0.20 -1.7 44,946 - CA264_20895 0.20 -0.0 44,962 - CA264_20895 0.24 -1.0 44,962 - CA264_20895 0.24 +0.1 44,993 - CA264_20895 0.31 -0.0 44,993 - CA264_20895 0.31 -1.3 44,995 - CA264_20895 0.32 +0.5 45,214 + CA264_20895 0.85 -0.9 45,286 + -1.4 45,342 + CA264_20900 0.11 -0.2 45,347 + CA264_20900 0.12 -0.3 45,378 + CA264_20900 0.17 -1.4 45,379 - CA264_20900 0.17 -1.0 45,379 - CA264_20900 0.17 +0.6 45,399 + CA264_20900 0.20 -1.1 45,524 + CA264_20900 0.40 -1.1 45,525 - CA264_20900 0.40 +2.3 45,525 - CA264_20900 0.40 -1.2 45,596 + CA264_20900 0.52 -0.9 45,597 - CA264_20900 0.52 -1.6 45,638 - CA264_20900 0.58 +0.0 45,740 + CA264_20900 0.75 -1.3 45,838 - -1.3 45,880 - +0.2 45,880 - +0.7 45,894 - -0.3 45,968 + CA264_20905 0.31 -2.2 45,969 - CA264_20905 0.32 -0.7 45,969 - CA264_20905 0.32 -1.3 45,969 - CA264_20905 0.32 -0.1 45,974 + CA264_20905 0.34 -0.6 46,045 - CA264_20905 0.64 -1.1 46,047 - CA264_20905 0.65 -0.0 46,154 - -0.1 46,182 + -0.7 46,211 + -0.2 46,211 + +0.3 46,276 + +0.2 46,277 - -0.3
Or see this region's nucleotide sequence