Experiment: m.b. Spectinomycin 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16090 and CA264_16095 are separated by 448 nucleotides CA264_16095 and CA264_16100 are separated by 132 nucleotides CA264_16100 and CA264_16105 are separated by 34 nucleotides
CA264_16090: CA264_16090 - DNA-binding protein, at 3,747,418 to 3,748,419
_16090
CA264_16095: CA264_16095 - tRNA-Asn, at 3,748,868 to 3,748,941
_16095
CA264_16100: CA264_16100 - hypothetical protein, at 3,749,074 to 3,749,451
_16100
CA264_16105: CA264_16105 - 3-hydroxybutyryl-CoA dehydrogenase, at 3,749,486 to 3,750,346
_16105
Position (kb)
3749
3750 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3748.419 kb on + strand at 3748.419 kb on + strand at 3748.616 kb on + strand at 3748.655 kb on - strand at 3748.685 kb on + strand at 3748.692 kb on - strand at 3748.699 kb on + strand at 3748.699 kb on + strand at 3748.700 kb on - strand at 3748.747 kb on - strand at 3748.770 kb on + strand at 3748.777 kb on - strand at 3749.305 kb on - strand, within CA264_16100 at 3749.378 kb on - strand, within CA264_16100 at 3749.410 kb on + strand, within CA264_16100 at 3749.496 kb on + strand at 3749.496 kb on + strand at 3749.496 kb on + strand at 3749.500 kb on + strand at 3749.501 kb on - strand at 3749.503 kb on - strand at 3749.586 kb on + strand, within CA264_16105 at 3749.626 kb on + strand, within CA264_16105 at 3749.627 kb on - strand, within CA264_16105 at 3749.629 kb on + strand, within CA264_16105 at 3749.671 kb on + strand, within CA264_16105 at 3749.841 kb on - strand, within CA264_16105 at 3750.276 kb on - strand at 3750.312 kb on - strand at 3750.315 kb on - strand at 3750.315 kb on - strand at 3750.321 kb on - strand at 3750.321 kb on - strand at 3750.347 kb on - strand at 3750.389 kb on - strand at 3750.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.08 mg/ml remove 3,748,419 + -0.4 3,748,419 + -0.8 3,748,616 + -0.6 3,748,655 - +1.0 3,748,685 + -0.7 3,748,692 - +0.5 3,748,699 + +0.3 3,748,699 + +0.3 3,748,700 - -0.2 3,748,747 - -0.3 3,748,770 + -0.3 3,748,777 - -0.5 3,749,305 - CA264_16100 0.61 +0.9 3,749,378 - CA264_16100 0.80 -1.3 3,749,410 + CA264_16100 0.89 -2.0 3,749,496 + -1.1 3,749,496 + -0.5 3,749,496 + +0.8 3,749,500 + +0.6 3,749,501 - -0.5 3,749,503 - +0.8 3,749,586 + CA264_16105 0.12 +0.4 3,749,626 + CA264_16105 0.16 +0.7 3,749,627 - CA264_16105 0.16 +0.2 3,749,629 + CA264_16105 0.17 -0.5 3,749,671 + CA264_16105 0.21 +2.0 3,749,841 - CA264_16105 0.41 -0.7 3,750,276 - -0.4 3,750,312 - +0.6 3,750,315 - -0.7 3,750,315 - +1.1 3,750,321 - -0.3 3,750,321 - +0.5 3,750,347 - -0.4 3,750,389 - -1.0 3,750,397 - -1.2
Or see this region's nucleotide sequence