Experiment: m.b. Spectinomycin 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06350 and CA264_06355 are separated by 242 nucleotides CA264_06355 and CA264_06360 are separated by 13 nucleotides
CA264_06350: CA264_06350 - o-succinylbenzoate synthase, at 1,475,482 to 1,476,537
_06350
CA264_06355: CA264_06355 - ergothioneine biosynthesis protein EgtB, at 1,476,780 to 1,478,051
_06355
CA264_06360: CA264_06360 - L-histidine N(alpha)-methyltransferase, at 1,478,065 to 1,479,066
_06360
Position (kb)
1476
1477
1478
1479 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1476.546 kb on + strand at 1476.567 kb on - strand at 1476.591 kb on + strand at 1476.610 kb on - strand at 1476.625 kb on + strand at 1476.626 kb on - strand at 1476.725 kb on - strand at 1476.725 kb on - strand at 1476.775 kb on - strand at 1476.779 kb on + strand at 1476.779 kb on + strand at 1476.779 kb on + strand at 1476.780 kb on - strand at 1476.835 kb on + strand at 1476.835 kb on + strand at 1476.835 kb on + strand at 1476.835 kb on + strand at 1476.836 kb on - strand at 1476.960 kb on - strand, within CA264_06355 at 1476.961 kb on + strand, within CA264_06355 at 1476.961 kb on + strand, within CA264_06355 at 1477.029 kb on + strand, within CA264_06355 at 1477.030 kb on - strand, within CA264_06355 at 1477.030 kb on - strand, within CA264_06355 at 1477.101 kb on + strand, within CA264_06355 at 1477.101 kb on + strand, within CA264_06355 at 1477.101 kb on + strand, within CA264_06355 at 1477.102 kb on - strand, within CA264_06355 at 1477.103 kb on + strand, within CA264_06355 at 1477.104 kb on - strand, within CA264_06355 at 1477.120 kb on + strand, within CA264_06355 at 1477.249 kb on - strand, within CA264_06355 at 1477.249 kb on - strand, within CA264_06355 at 1477.356 kb on + strand, within CA264_06355 at 1477.358 kb on + strand, within CA264_06355 at 1477.358 kb on + strand, within CA264_06355 at 1477.417 kb on + strand, within CA264_06355 at 1477.417 kb on + strand, within CA264_06355 at 1477.418 kb on - strand, within CA264_06355 at 1477.418 kb on - strand, within CA264_06355 at 1477.468 kb on - strand, within CA264_06355 at 1477.478 kb on + strand, within CA264_06355 at 1477.495 kb on - strand, within CA264_06355 at 1477.583 kb on + strand, within CA264_06355 at 1477.602 kb on - strand, within CA264_06355 at 1477.602 kb on - strand, within CA264_06355 at 1477.629 kb on - strand, within CA264_06355 at 1477.659 kb on + strand, within CA264_06355 at 1477.674 kb on + strand, within CA264_06355 at 1477.679 kb on + strand, within CA264_06355 at 1477.691 kb on + strand, within CA264_06355 at 1477.754 kb on + strand, within CA264_06355 at 1477.848 kb on + strand, within CA264_06355 at 1477.878 kb on - strand, within CA264_06355 at 1477.906 kb on - strand, within CA264_06355 at 1477.919 kb on + strand, within CA264_06355 at 1477.920 kb on - strand, within CA264_06355 at 1477.920 kb on - strand, within CA264_06355 at 1477.920 kb on - strand, within CA264_06355 at 1477.920 kb on - strand, within CA264_06355 at 1478.023 kb on - strand at 1478.062 kb on + strand at 1478.062 kb on + strand at 1478.062 kb on + strand at 1478.063 kb on - strand at 1478.063 kb on - strand at 1478.079 kb on - strand at 1478.090 kb on + strand at 1478.090 kb on + strand at 1478.248 kb on + strand, within CA264_06360 at 1478.251 kb on + strand, within CA264_06360 at 1478.251 kb on + strand, within CA264_06360 at 1478.252 kb on - strand, within CA264_06360 at 1478.252 kb on - strand, within CA264_06360 at 1478.375 kb on + strand, within CA264_06360 at 1478.375 kb on + strand, within CA264_06360 at 1478.417 kb on - strand, within CA264_06360 at 1478.417 kb on - strand, within CA264_06360 at 1478.417 kb on - strand, within CA264_06360 at 1478.516 kb on - strand, within CA264_06360 at 1478.537 kb on + strand, within CA264_06360 at 1478.547 kb on + strand, within CA264_06360 at 1478.642 kb on - strand, within CA264_06360 at 1478.681 kb on + strand, within CA264_06360 at 1478.700 kb on - strand, within CA264_06360 at 1478.703 kb on - strand, within CA264_06360 at 1478.766 kb on + strand, within CA264_06360 at 1478.767 kb on - strand, within CA264_06360 at 1478.767 kb on - strand, within CA264_06360 at 1478.794 kb on - strand, within CA264_06360 at 1478.824 kb on + strand, within CA264_06360 at 1478.824 kb on + strand, within CA264_06360 at 1478.824 kb on + strand, within CA264_06360 at 1478.824 kb on + strand, within CA264_06360 at 1478.825 kb on - strand, within CA264_06360 at 1478.825 kb on - strand, within CA264_06360 at 1478.827 kb on - strand, within CA264_06360 at 1478.882 kb on + strand, within CA264_06360 at 1478.883 kb on - strand, within CA264_06360 at 1478.956 kb on + strand, within CA264_06360 at 1478.956 kb on + strand, within CA264_06360 at 1478.956 kb on + strand, within CA264_06360 at 1478.956 kb on + strand, within CA264_06360 at 1478.957 kb on - strand, within CA264_06360 at 1478.957 kb on - strand, within CA264_06360 at 1479.020 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.08 mg/ml remove 1,476,546 + +0.5 1,476,567 - -0.3 1,476,591 + -1.3 1,476,610 - +0.2 1,476,625 + +0.9 1,476,626 - -0.4 1,476,725 - -0.5 1,476,725 - -0.5 1,476,775 - +0.6 1,476,779 + +0.1 1,476,779 + +0.8 1,476,779 + +2.6 1,476,780 - -0.0 1,476,835 + +0.8 1,476,835 + +0.7 1,476,835 + -1.1 1,476,835 + +0.4 1,476,836 - -0.2 1,476,960 - CA264_06355 0.14 +0.5 1,476,961 + CA264_06355 0.14 +0.4 1,476,961 + CA264_06355 0.14 +1.2 1,477,029 + CA264_06355 0.20 +1.7 1,477,030 - CA264_06355 0.20 +0.1 1,477,030 - CA264_06355 0.20 -0.6 1,477,101 + CA264_06355 0.25 +0.3 1,477,101 + CA264_06355 0.25 +1.1 1,477,101 + CA264_06355 0.25 -1.1 1,477,102 - CA264_06355 0.25 -0.3 1,477,103 + CA264_06355 0.25 +0.2 1,477,104 - CA264_06355 0.25 -1.8 1,477,120 + CA264_06355 0.27 -0.6 1,477,249 - CA264_06355 0.37 +0.5 1,477,249 - CA264_06355 0.37 +0.3 1,477,356 + CA264_06355 0.45 +0.6 1,477,358 + CA264_06355 0.45 +0.4 1,477,358 + CA264_06355 0.45 -0.8 1,477,417 + CA264_06355 0.50 +1.9 1,477,417 + CA264_06355 0.50 -0.5 1,477,418 - CA264_06355 0.50 +1.1 1,477,418 - CA264_06355 0.50 +0.3 1,477,468 - CA264_06355 0.54 +0.2 1,477,478 + CA264_06355 0.55 -0.3 1,477,495 - CA264_06355 0.56 -2.3 1,477,583 + CA264_06355 0.63 +0.3 1,477,602 - CA264_06355 0.65 -0.3 1,477,602 - CA264_06355 0.65 -0.2 1,477,629 - CA264_06355 0.67 +0.1 1,477,659 + CA264_06355 0.69 +1.2 1,477,674 + CA264_06355 0.70 -2.5 1,477,679 + CA264_06355 0.71 +0.7 1,477,691 + CA264_06355 0.72 +1.2 1,477,754 + CA264_06355 0.77 +1.3 1,477,848 + CA264_06355 0.84 +1.5 1,477,878 - CA264_06355 0.86 +1.0 1,477,906 - CA264_06355 0.89 +0.6 1,477,919 + CA264_06355 0.90 -0.1 1,477,920 - CA264_06355 0.90 -0.1 1,477,920 - CA264_06355 0.90 +0.0 1,477,920 - CA264_06355 0.90 -1.2 1,477,920 - CA264_06355 0.90 +1.1 1,478,023 - +2.1 1,478,062 + +0.5 1,478,062 + +0.3 1,478,062 + -1.8 1,478,063 - +0.4 1,478,063 - +0.2 1,478,079 - +0.2 1,478,090 + +0.1 1,478,090 + +0.2 1,478,248 + CA264_06360 0.18 +0.6 1,478,251 + CA264_06360 0.19 +0.8 1,478,251 + CA264_06360 0.19 +0.8 1,478,252 - CA264_06360 0.19 -0.4 1,478,252 - CA264_06360 0.19 +0.2 1,478,375 + CA264_06360 0.31 -0.7 1,478,375 + CA264_06360 0.31 +0.2 1,478,417 - CA264_06360 0.35 -1.1 1,478,417 - CA264_06360 0.35 +0.1 1,478,417 - CA264_06360 0.35 -1.1 1,478,516 - CA264_06360 0.45 -0.3 1,478,537 + CA264_06360 0.47 -0.1 1,478,547 + CA264_06360 0.48 +1.1 1,478,642 - CA264_06360 0.58 +0.5 1,478,681 + CA264_06360 0.61 -0.0 1,478,700 - CA264_06360 0.63 -0.7 1,478,703 - CA264_06360 0.64 +1.0 1,478,766 + CA264_06360 0.70 +0.2 1,478,767 - CA264_06360 0.70 +1.7 1,478,767 - CA264_06360 0.70 +0.3 1,478,794 - CA264_06360 0.73 -0.3 1,478,824 + CA264_06360 0.76 +1.2 1,478,824 + CA264_06360 0.76 +0.8 1,478,824 + CA264_06360 0.76 -0.8 1,478,824 + CA264_06360 0.76 +0.8 1,478,825 - CA264_06360 0.76 -0.4 1,478,825 - CA264_06360 0.76 -1.8 1,478,827 - CA264_06360 0.76 +0.2 1,478,882 + CA264_06360 0.82 +0.3 1,478,883 - CA264_06360 0.82 +0.2 1,478,956 + CA264_06360 0.89 +0.6 1,478,956 + CA264_06360 0.89 -2.2 1,478,956 + CA264_06360 0.89 +0.3 1,478,956 + CA264_06360 0.89 +0.6 1,478,957 - CA264_06360 0.89 -1.5 1,478,957 - CA264_06360 0.89 +1.5 1,479,020 - +0.5
Or see this region's nucleotide sequence