Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05965

Experiment: m.b. Spectinomycin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.08 mg/ml
1,392,981	+		CA264_05960	0.52	+0.2
1,393,022	+		CA264_05960	0.55	+0.1
1,393,087	+		CA264_05960	0.60	-0.5
1,393,103	-		CA264_05960	0.61	-0.4
1,393,359	-		CA264_05960	0.78	-1.6
1,393,359	-		CA264_05960	0.78	-0.1
1,393,370	+		CA264_05960	0.79	-0.1
1,393,370	+		CA264_05960	0.79	+0.9
1,393,371	-		CA264_05960	0.79	-0.4
1,393,385	+		CA264_05960	0.80	-0.5
1,393,385	+		CA264_05960	0.80	-1.1
1,393,393	-		CA264_05960	0.81	-1.3
1,393,393	-		CA264_05960	0.81	+0.3
1,393,400	-		CA264_05960	0.81	-0.6
1,393,400	-		CA264_05960	0.81	-1.2
1,393,414	+		CA264_05960	0.82	+0.0
1,393,415	-		CA264_05960	0.82	-0.6
1,393,424	-		CA264_05960	0.83	-0.4
1,393,563	-				-1.0
1,393,569	+				-1.4
1,393,643	-				-0.4
1,393,643	-				-0.4
1,393,712	-				+0.3
1,393,748	+				+0.8
1,393,749	-				-1.5
1,393,786	+				+0.6
1,393,786	+				-0.4
1,393,786	+				-0.4
1,393,806	+				-1.0
1,393,806	+				+0.2
1,393,817	+				-0.6
1,393,818	-				-0.0
1,393,842	+				-1.7
1,393,842	+				-0.1
1,393,843	-				+0.0
1,393,843	-				-0.3
1,393,843	-				-0.3
1,393,844	+				+0.6
1,393,845	-				-0.4
1,393,845	-				-0.7
1,393,854	+				+0.7
1,393,856	+				-0.2
1,393,904	+				+0.6
1,393,931	-		CA264_05965	0.11	+0.0
1,393,931	-		CA264_05965	0.11	-0.3
1,393,983	+		CA264_05965	0.16	-0.0
1,393,984	-		CA264_05965	0.16	-1.0
1,394,016	+		CA264_05965	0.20	+1.2
1,394,088	+		CA264_05965	0.26	+0.1
1,394,141	-		CA264_05965	0.32	+0.9
1,394,183	+		CA264_05965	0.36	+0.6
1,394,184	-		CA264_05965	0.36	-0.1
1,394,184	-		CA264_05965	0.36	-0.5
1,394,185	+		CA264_05965	0.36	+0.2
1,394,185	+		CA264_05965	0.36	+2.8
1,394,186	-		CA264_05965	0.36	-1.0
1,394,188	+		CA264_05965	0.36	-0.1
1,394,188	+		CA264_05965	0.36	+1.3
1,394,189	-		CA264_05965	0.36	-1.0
1,394,189	-		CA264_05965	0.36	-1.2
1,394,236	+		CA264_05965	0.41	+0.1
1,394,246	-		CA264_05965	0.42	+0.1
1,394,246	-		CA264_05965	0.42	-0.0
1,394,266	+		CA264_05965	0.44	+1.6
1,394,272	+		CA264_05965	0.44	-0.3
1,394,272	+		CA264_05965	0.44	-0.1
1,394,272	+		CA264_05965	0.44	+0.1
1,394,273	-		CA264_05965	0.44	-0.6
1,394,273	-		CA264_05965	0.44	-0.1
1,394,273	-		CA264_05965	0.44	-1.2
1,394,327	-		CA264_05965	0.49	-1.1
1,394,337	-		CA264_05965	0.50	-0.3
1,394,433	+		CA264_05965	0.60	+2.2
1,394,462	+		CA264_05965	0.62	+0.2
1,394,463	-		CA264_05965	0.62	-2.1
1,394,474	-		CA264_05965	0.63	+0.0
1,394,533	-		CA264_05965	0.69	+0.2
1,394,560	+		CA264_05965	0.72	-1.6
1,394,630	-		CA264_05965	0.78	+0.3
1,394,669	+		CA264_05965	0.82	+0.3
1,394,670	-		CA264_05965	0.82	+0.1
1,394,689	+		CA264_05965	0.84	-0.8
1,394,690	-		CA264_05965	0.84	-0.4
1,394,697	+		CA264_05965	0.85	+0.9
1,394,701	+		CA264_05965	0.85	+0.3
1,394,727	-		CA264_05965	0.88	+0.6
1,394,820	+				-0.2
1,394,821	-				+0.9
1,394,830	+				+0.6
1,394,831	-				-1.2
1,394,833	-				-0.3
1,394,852	-				-0.3
1,394,852	-				-0.8
1,394,852	-				-0.7
1,394,858	+				+0.1
1,394,859	-				-1.4
1,394,862	+				+0.5
1,394,893	+				+0.6
1,394,932	+				-0.2
1,394,944	+				+0.3
1,394,950	+				+0.9
1,394,968	-				+0.4
1,394,970	-		CA264_05970	0.10	-0.4
1,394,970	-		CA264_05970	0.10	-0.3
1,395,083	-		CA264_05970	0.39	-0.4
1,395,090	+		CA264_05970	0.41	-0.5
1,395,090	+		CA264_05970	0.41	-0.1
1,395,090	+		CA264_05970	0.41	-0.3
1,395,090	+		CA264_05970	0.41	-0.6
1,395,090	+		CA264_05970	0.41	-0.3
1,395,091	-		CA264_05970	0.41	-0.1
1,395,091	-		CA264_05970	0.41	+0.6
1,395,091	-		CA264_05970	0.41	-0.6
1,395,094	+		CA264_05970	0.42	+1.0
1,395,199	+		CA264_05970	0.69	-0.1
1,395,200	-		CA264_05970	0.70	+0.7
1,395,206	-		CA264_05970	0.71	-0.4
1,395,206	-		CA264_05970	0.71	-1.4
1,395,250	-		CA264_05970	0.82	+0.1
1,395,304	-				+0.4
1,395,311	+				-1.2
1,395,312	-				+0.2
1,395,429	+				+0.6
1,395,477	+				-0.2
1,395,495	-				-0.2
1,395,505	+				+0.1
1,395,532	-				+0.0
1,395,532	-				-0.4
1,395,535	-				+0.1
1,395,535	-				-0.3
1,395,535	-				-0.1
1,395,535	-				-0.2
1,395,537	+				+0.4
1,395,538	-				+0.5
1,395,538	-				+0.4
1,395,538	-				+0.3
1,395,538	-				+0.1
1,395,538	-				+0.0
1,395,547	+				-0.1
1,395,558	-				+0.3
1,395,572	+				+0.9
1,395,575	+				+0.0
1,395,575	+				-0.4
1,395,633	+		CA264_05975	0.11	+0.5
1,395,633	+		CA264_05975	0.11	-0.3
1,395,717	+		CA264_05975	0.32	+0.2
1,395,717	+		CA264_05975	0.32	-0.1
1,395,718	-		CA264_05975	0.32	+2.2
1,395,718	-		CA264_05975	0.32	+0.0
1,395,721	+		CA264_05975	0.33	+0.2
1,395,721	+		CA264_05975	0.33	+0.9
1,395,721	+		CA264_05975	0.33	+2.3
1,395,721	+		CA264_05975	0.33	-0.6
1,395,721	+		CA264_05975	0.33	-0.3
1,395,721	+		CA264_05975	0.33	+0.6
1,395,721	+		CA264_05975	0.33	-0.2
1,395,721	+		CA264_05975	0.33	-0.5
1,395,722	-		CA264_05975	0.33	-2.0
1,395,722	-		CA264_05975	0.33	-0.2
1,395,737	+		CA264_05975	0.36	+1.6
1,395,737	+		CA264_05975	0.36	-0.2
1,395,791	+		CA264_05975	0.50	-0.2