Experiment: m.b. Spectinomycin 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01150 and CA264_01155 are separated by 275 nucleotides CA264_01155 and CA264_01160 are separated by 222 nucleotides
CA264_01150: CA264_01150 - Maebl, at 253,310 to 254,116
_01150
CA264_01155: CA264_01155 - Zn-dependent protease, at 254,392 to 255,387
_01155
CA264_01160: CA264_01160 - peptidase M28 family protein, at 255,610 to 257,037
_01160
Position (kb) 254
255
256 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 253.454 kb on + strand, within CA264_01150 at 253.648 kb on + strand, within CA264_01150 at 253.681 kb on + strand, within CA264_01150 at 253.687 kb on + strand, within CA264_01150 at 253.697 kb on - strand, within CA264_01150 at 253.751 kb on + strand, within CA264_01150 at 253.751 kb on + strand, within CA264_01150 at 254.033 kb on + strand, within CA264_01150 at 254.033 kb on + strand, within CA264_01150 at 254.034 kb on - strand, within CA264_01150 at 254.034 kb on - strand, within CA264_01150 at 254.092 kb on + strand at 254.121 kb on - strand at 254.175 kb on + strand at 254.179 kb on + strand at 254.179 kb on + strand at 254.231 kb on + strand at 254.377 kb on + strand at 254.379 kb on + strand at 254.864 kb on + strand, within CA264_01155 at 255.063 kb on + strand, within CA264_01155 at 255.109 kb on + strand, within CA264_01155 at 255.220 kb on + strand, within CA264_01155 at 255.221 kb on - strand, within CA264_01155 at 255.257 kb on + strand, within CA264_01155 at 255.377 kb on + strand at 255.403 kb on - strand at 255.425 kb on + strand at 255.426 kb on - strand at 255.482 kb on + strand at 255.501 kb on - strand at 255.520 kb on + strand at 255.521 kb on - strand at 255.543 kb on + strand at 255.544 kb on - strand at 255.568 kb on + strand at 255.569 kb on - strand at 255.645 kb on - strand at 255.691 kb on + strand at 255.725 kb on - strand at 255.755 kb on - strand, within CA264_01160 at 255.755 kb on - strand, within CA264_01160 at 256.077 kb on + strand, within CA264_01160 at 256.091 kb on + strand, within CA264_01160 at 256.113 kb on + strand, within CA264_01160 at 256.116 kb on + strand, within CA264_01160 at 256.117 kb on - strand, within CA264_01160 at 256.367 kb on - strand, within CA264_01160
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.08 mg/ml remove 253,454 + CA264_01150 0.18 +1.0 253,648 + CA264_01150 0.42 +0.3 253,681 + CA264_01150 0.46 -0.6 253,687 + CA264_01150 0.47 +0.2 253,697 - CA264_01150 0.48 +1.0 253,751 + CA264_01150 0.55 +1.3 253,751 + CA264_01150 0.55 +1.3 254,033 + CA264_01150 0.90 -0.9 254,033 + CA264_01150 0.90 -0.1 254,034 - CA264_01150 0.90 +2.0 254,034 - CA264_01150 0.90 -0.3 254,092 + +0.3 254,121 - -1.6 254,175 + -4.5 254,179 + -2.3 254,179 + -2.6 254,231 + -4.0 254,377 + -1.8 254,379 + -2.0 254,864 + CA264_01155 0.47 -4.4 255,063 + CA264_01155 0.67 -1.6 255,109 + CA264_01155 0.72 -1.8 255,220 + CA264_01155 0.83 -2.0 255,221 - CA264_01155 0.83 -1.3 255,257 + CA264_01155 0.87 -0.3 255,377 + -0.8 255,403 - -1.3 255,425 + +1.7 255,426 - -1.4 255,482 + -1.3 255,501 - -2.5 255,520 + -1.1 255,521 - +1.0 255,543 + -1.2 255,544 - -3.3 255,568 + -0.2 255,569 - -2.1 255,645 - -2.3 255,691 + +0.6 255,725 - -2.9 255,755 - CA264_01160 0.10 -4.2 255,755 - CA264_01160 0.10 -1.1 256,077 + CA264_01160 0.33 -1.3 256,091 + CA264_01160 0.34 -0.7 256,113 + CA264_01160 0.35 +3.0 256,116 + CA264_01160 0.35 -0.4 256,117 - CA264_01160 0.36 -1.4 256,367 - CA264_01160 0.53 -0.3
Or see this region's nucleotide sequence