Strain Fitness in Escherichia coli BW25113 around b3417

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
3,547,113	-	malQ	b3416	0.53	-1.3
3,547,122	-	malQ	b3416	0.53	-1.6
3,547,154	-	malQ	b3416	0.55	-0.7
3,547,154	-	malQ	b3416	0.55	+0.3
3,547,229	-	malQ	b3416	0.59	-0.3
3,547,309	-	malQ	b3416	0.62	-0.7
3,547,337	+	malQ	b3416	0.64	-2.2
3,547,337	+	malQ	b3416	0.64	-0.1
3,547,356	-	malQ	b3416	0.65	+0.3
3,547,356	-	malQ	b3416	0.65	+0.3
3,547,411	-	malQ	b3416	0.67	-1.1
3,547,490	+	malQ	b3416	0.71	+0.3
3,547,490	+	malQ	b3416	0.71	-1.2
3,547,562	+	malQ	b3416	0.75	-1.5
3,547,661	-	malQ	b3416	0.79	-0.6
3,547,661	-	malQ	b3416	0.79	-0.1
3,547,713	-	malQ	b3416	0.82	+0.3
3,547,793	-	malQ	b3416	0.86	+1.0
3,547,816	+				+1.3
3,547,848	-	malQ	b3416	0.88	-0.3
3,547,858	-	malQ	b3416	0.89	-1.1
3,547,870	-	malQ	b3416	0.89	-0.7
3,547,870	-	malQ	b3416	0.89	+0.0
3,547,918	-				+1.3
3,548,024	-				+1.3
3,548,024	-				-0.3
3,548,033	+				-0.1
3,548,051	-				-0.7
3,548,051	-				-0.5
3,548,051	-				-1.0
3,548,061	+				-0.3
3,548,067	+				-0.3
3,548,067	+				+0.1
3,548,075	-				-0.4
3,548,080	-				-0.8
3,548,084	+				+0.4
3,548,148	-				-1.1
3,548,206	-				-0.4
3,548,225	-				-0.6
3,548,245	+				+1.3
3,548,250	+				+1.3
3,548,253	-				-0.7
3,548,253	-				-0.2
3,548,305	-				-0.3
3,548,314	+				+0.3
3,548,377	-	malP	b3417	0.11	-0.5
3,548,377	-	malP	b3417	0.11	-0.3
3,548,381	+	malP	b3417	0.12	+0.2
3,548,381	+	malP	b3417	0.12	-0.9
3,548,389	+	malP	b3417	0.12	+0.4
3,548,389	+	malP	b3417	0.12	-0.1
3,548,389	-	malP	b3417	0.12	-0.9
3,548,425	-	malP	b3417	0.13	-0.1
3,548,425	-	malP	b3417	0.13	+1.6
3,548,447	-	malP	b3417	0.14	-1.0
3,548,524	+	malP	b3417	0.18	+1.3
3,548,524	+	malP	b3417	0.18	-1.1
3,548,574	-	malP	b3417	0.20	-0.1
3,548,673	+	malP	b3417	0.24	+0.1
3,548,674	+	malP	b3417	0.24	+0.5
3,548,674	-	malP	b3417	0.24	-0.7
3,548,760	-	malP	b3417	0.27	+0.7
3,548,826	-	malP	b3417	0.30	+0.5
3,548,862	+	malP	b3417	0.32	-0.1
3,548,935	-	malP	b3417	0.35	+1.3
3,548,935	-	malP	b3417	0.35	-1.1
3,548,937	-	malP	b3417	0.35	+0.3
3,549,086	+	malP	b3417	0.41	-1.4
3,549,086	+	malP	b3417	0.41	+0.3
3,549,121	-	malP	b3417	0.43	-0.0
3,549,136	+	malP	b3417	0.43	+0.7
3,549,136	+	malP	b3417	0.43	+0.5
3,549,144	-	malP	b3417	0.44	-0.2
3,549,155	+	malP	b3417	0.44	-0.2
3,549,172	+	malP	b3417	0.45	+0.0
3,549,172	+	malP	b3417	0.45	+0.0
3,549,229	+	malP	b3417	0.47	+0.3
3,549,287	+	malP	b3417	0.49	+0.0
3,549,342	+	malP	b3417	0.52	+0.8
3,549,346	-	malP	b3417	0.52	+0.3
3,549,354	-	malP	b3417	0.52	+1.3
3,549,434	+	malP	b3417	0.56	+0.2
3,549,434	+	malP	b3417	0.56	-0.1
3,549,454	+	malP	b3417	0.56	-1.6
3,549,462	-	malP	b3417	0.57	-0.4
3,549,462	-	malP	b3417	0.57	-0.8
3,549,510	-	malP	b3417	0.59	-0.7
3,549,552	-	malP	b3417	0.61	-0.5
3,549,576	-	malP	b3417	0.62	-0.3
3,549,583	+	malP	b3417	0.62	-0.1
3,549,613	+	malP	b3417	0.63	+0.7
3,549,643	+	malP	b3417	0.64	-0.5
3,549,697	-	malP	b3417	0.67	-0.2
3,549,716	-	malP	b3417	0.67	-1.4
3,549,716	-	malP	b3417	0.67	-0.2
3,549,774	+	malP	b3417	0.70	+0.3
3,549,774	+	malP	b3417	0.70	-0.4
3,549,822	+	malP	b3417	0.72	-0.7
3,549,858	+	malP	b3417	0.73	+1.0
3,549,866	-	malP	b3417	0.74	-0.7
3,549,958	-	malP	b3417	0.78	+0.6
3,549,988	+	malP	b3417	0.79	-1.6
3,550,004	-	malP	b3417	0.79	-1.7
3,550,004	-	malP	b3417	0.79	+0.6
3,550,100	-	malP	b3417	0.83	+0.1
3,550,102	+	malP	b3417	0.84	-0.7
3,550,143	-	malP	b3417	0.85	-0.3
3,550,143	-	malP	b3417	0.85	-0.3
3,550,160	+	malP	b3417	0.86	-0.2
3,550,160	+	malP	b3417	0.86	-1.4
3,550,231	+	malP	b3417	0.89	-0.1
3,550,350	+				-0.7
3,550,353	-				+0.7
3,550,353	-				+0.6
3,550,389	-				-0.5
3,550,429	-				+1.1
3,550,446	-				-0.6
3,550,462	+				-0.4
3,550,500	-				+0.1
3,550,526	+				-1.1
3,550,526	+				-0.2
3,550,564	+				+1.1
3,550,607	+				+0.3
3,550,622	+				+0.6
3,550,622	+				+0.8
3,550,624	+				-0.3
3,550,624	+				-1.1
3,550,640	-				+0.5
3,550,671	+				+0.1
3,550,671	+				+0.0
3,550,679	-				-0.0
3,550,679	-				+0.2
3,550,679	-				-0.7
3,550,800	+				+0.6
3,550,812	-				-1.3
3,550,812	-				+0.8
3,550,813	-				+0.3
3,550,813	-				+1.6
3,550,844	+				+0.3
3,550,844	+				+0.9
3,550,898	+				-2.4
3,550,911	-				-1.3
3,550,911	-				+0.3
3,550,913	+				+0.0
3,550,946	+				+0.4
3,550,949	+				-0.9
3,550,949	+				+0.0
3,550,967	+				+0.3
3,550,975	-				+0.7
3,550,975	-				+0.4
3,550,975	-				-0.0
3,550,977	+				-0.1
3,550,977	+				-1.6
3,550,977	+				+0.8
3,551,000	-				+0.6
3,551,003	+				-0.1
3,551,024	-				-0.0
3,551,032	-				-0.5
3,551,036	+				-0.6
3,551,037	+				+0.3
3,551,045	-				-0.9
3,551,045	-				+0.3
3,551,045	-				+0.7
3,551,092	+				+0.5
3,551,092	+				-0.7
3,551,147	+				-0.3
3,551,152	+				-0.5
3,551,161	+				+0.1
3,551,214	+				+0.2
3,551,229	+				-0.0
3,551,229	+				+1.0
3,551,243	-				-0.2
3,551,284	+				-0.2
3,551,301	-				+0.4
3,551,304	+				-0.2
3,551,314	+				+1.6
3,551,314	+				+0.7
3,551,338	+				-0.8
3,551,425	-	malT	b3418	0.12	-2.2
3,551,425	-	malT	b3418	0.12	+0.1
3,551,430	-	malT	b3418	0.12	-0.4
3,551,481	-	malT	b3418	0.14	-0.3
3,551,488	+	malT	b3418	0.14	-0.4