Strain Fitness in Escherichia coli BW25113 around b3935

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
4,121,714	+	cytR	b3934	0.25	-1.4
4,121,714	+	cytR	b3934	0.25	-0.6
4,121,818	-	cytR	b3934	0.35	+1.1
4,121,818	-	cytR	b3934	0.35	-1.8
4,121,827	-	cytR	b3934	0.36	-0.7
4,121,847	+	cytR	b3934	0.38	+0.7
4,121,847	+	cytR	b3934	0.38	+0.5
4,121,852	+	cytR	b3934	0.39	-0.6
4,121,858	+	cytR	b3934	0.39	-0.7
4,121,895	+	cytR	b3934	0.43	+0.0
4,121,895	+	cytR	b3934	0.43	+0.7
4,121,905	-	cytR	b3934	0.44	-0.2
4,121,906	+	cytR	b3934	0.44	-0.0
4,121,914	-	cytR	b3934	0.45	+1.4
4,121,923	+	cytR	b3934	0.46	+1.8
4,121,970	+	cytR	b3934	0.50	-0.2
4,121,982	+	cytR	b3934	0.51	-1.2
4,121,987	+	cytR	b3934	0.52	-0.2
4,121,989	+	cytR	b3934	0.52	-0.1
4,121,990	-	cytR	b3934	0.52	+0.2
4,121,990	-	cytR	b3934	0.52	-0.3
4,122,053	-	cytR	b3934	0.58	+0.2
4,122,053	-	cytR	b3934	0.58	+1.3
4,122,088	-	cytR	b3934	0.62	+0.9
4,122,098	-	cytR	b3934	0.63	+0.4
4,122,104	-	cytR	b3934	0.63	+0.0
4,122,121	-	cytR	b3934	0.65	-0.2
4,122,185	-	cytR	b3934	0.71	+0.3
4,122,190	-	cytR	b3934	0.72	-1.2
4,122,190	-	cytR	b3934	0.72	+1.0
4,122,203	+	cytR	b3934	0.73	+0.2
4,122,247	+	cytR	b3934	0.77	+0.4
4,122,259	+	cytR	b3934	0.78	-2.3
4,122,277	-	cytR	b3934	0.80	+0.4
4,122,277	-	cytR	b3934	0.80	+1.1
4,122,312	-	cytR	b3934	0.84	+0.0
4,122,353	+	cytR	b3934	0.88	+0.7
4,122,353	+	cytR	b3934	0.88	-0.5
4,122,361	-	cytR	b3934	0.88	-0.5
4,122,364	+	cytR	b3934	0.89	+0.7
4,122,387	+				-0.2
4,122,395	-				+0.3
4,122,499	+				+0.7
4,122,502	+				+1.0
4,122,647	-				+0.1
4,124,262	+	priA	b3935	0.74	-1.2
4,124,288	-	priA	b3935	0.75	-0.5
4,124,669	-				-0.8
4,124,791	-				-0.2
4,124,791	-				-0.9
4,124,835	+				-0.8
4,124,839	+				+0.6
4,124,865	+				+0.1
4,124,878	+				+0.7
4,124,886	-				+0.7
4,124,896	-				+0.2
4,124,959	+				+1.0
4,125,289	-				-0.0
4,125,289	-				-1.2
4,125,381	-	yiiX	b3937	0.12	-0.2
4,125,381	-	yiiX	b3937	0.12	-0.8
4,125,485	-	yiiX	b3937	0.29	-0.0
4,125,494	+	yiiX	b3937	0.30	+0.4
4,125,515	+	yiiX	b3937	0.34	+0.7
4,125,527	+	yiiX	b3937	0.36	+0.5
4,125,527	+	yiiX	b3937	0.36	-1.6
4,125,527	+	yiiX	b3937	0.36	+0.9
4,125,527	+	yiiX	b3937	0.36	+1.3
4,125,537	+	yiiX	b3937	0.37	-0.4
4,125,537	+	yiiX	b3937	0.37	+0.8
4,125,545	-	yiiX	b3937	0.39	+1.6
4,125,545	-	yiiX	b3937	0.39	+0.4
4,125,631	-	yiiX	b3937	0.53	-0.1
4,125,647	-	yiiX	b3937	0.56	+1.9
4,125,661	+	yiiX	b3937	0.58	+0.4
4,125,685	+	yiiX	b3937	0.62	-0.6
4,125,690	+	yiiX	b3937	0.63	+0.5
4,125,713	-	yiiX	b3937	0.66	+1.4
4,125,713	-	yiiX	b3937	0.66	+0.8
4,125,758	+	yiiX	b3937	0.74	-0.0
4,125,768	-	yiiX	b3937	0.75	-0.8
4,125,784	+	yiiX	b3937	0.78	+1.0
4,125,791	-	yiiX	b3937	0.79	-0.9
4,125,792	-	yiiX	b3937	0.79	+1.4
4,125,792	-	yiiX	b3937	0.79	+1.4