Strain Fitness in Escherichia coli BW25113 around b3678

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
3,853,959	-				+0.1
3,853,959	-				+2.0
3,853,993	+				+0.1
3,854,005	-				+0.5
3,854,011	-				+0.3
3,854,011	-				+0.0
3,854,053	-	yidH	b3676	0.20	+0.9
3,854,062	+	yidH	b3676	0.23	+0.9
3,854,062	+	yidH	b3676	0.23	+0.6
3,854,062	+	yidH	b3676	0.23	+0.4
3,854,080	+	yidH	b3676	0.28	+2.0
3,854,080	+	yidH	b3676	0.28	-0.4
3,854,129	-	yidH	b3676	0.42	+1.4
3,854,214	-	yidH	b3676	0.66	+0.9
3,854,214	-	yidH	b3676	0.66	+0.4
3,854,251	-	yidH	b3676	0.77	-1.1
3,854,251	-	yidH	b3676	0.77	+0.6
3,854,305	+				+0.6
3,854,356	+				+0.3
3,854,357	+				+1.4
3,854,357	+				+1.1
3,854,445	+				+0.5
3,854,445	-				+0.1
3,854,448	-				+0.6
3,854,448	-				-1.3
3,854,450	-				-0.0
3,854,562	+	yidI	b3677	0.28	-0.5
3,854,562	+	yidI	b3677	0.28	-0.2
3,854,575	-	yidI	b3677	0.30	-0.1
3,854,595	-	yidI	b3677	0.35	-0.2
3,854,693	-	yidI	b3677	0.57	+0.4
3,854,705	-	yidI	b3677	0.59	-1.9
3,854,705	-	yidI	b3677	0.59	+0.4
3,854,708	-	yidI	b3677	0.60	-0.2
3,854,743	-	yidI	b3677	0.68	+1.5
3,854,770	+	yidI	b3677	0.74	-0.4
3,854,803	-	yidI	b3677	0.81	+1.1
3,854,803	-	yidI	b3677	0.81	+1.0
3,854,889	-				+0.6
3,854,889	-				+0.8
3,854,908	-				+0.6
3,854,932	+				+0.1
3,854,997	+				+1.1
3,855,018	+				+0.9
3,855,018	+				-1.1
3,855,049	-				+0.1
3,855,053	-				+0.5
3,855,053	-				+0.7
3,855,064	-				+0.9
3,855,064	-				-1.4
3,855,072	-				-0.3
3,855,072	-				+0.9
3,855,132	-	yidJ	b3678	0.13	+0.5
3,855,265	-	yidJ	b3678	0.22	-0.5
3,855,265	-	yidJ	b3678	0.22	+1.1
3,855,307	-	yidJ	b3678	0.25	+0.6
3,855,327	-	yidJ	b3678	0.26	-0.5
3,855,399	-	yidJ	b3678	0.31	+0.9
3,855,450	+	yidJ	b3678	0.35	-1.1
3,855,475	-	yidJ	b3678	0.36	+0.9
3,855,548	+	yidJ	b3678	0.41	+0.1
3,855,556	-	yidJ	b3678	0.42	+1.0
3,855,582	+	yidJ	b3678	0.43	+1.0
3,855,681	-	yidJ	b3678	0.50	+0.6
3,855,695	-	yidJ	b3678	0.51	+0.5
3,855,706	-	yidJ	b3678	0.52	-0.9
3,855,718	+	yidJ	b3678	0.52	-0.4
3,855,718	+	yidJ	b3678	0.52	-0.5
3,855,791	-	yidJ	b3678	0.57	-0.5
3,855,791	-	yidJ	b3678	0.57	+1.1
3,855,864	-	yidJ	b3678	0.62	+3.3
3,855,883	-	yidJ	b3678	0.64	+1.5
3,855,883	-	yidJ	b3678	0.64	+0.2
3,855,990	+	yidJ	b3678	0.71	-0.9
3,855,990	+	yidJ	b3678	0.71	+0.5
3,855,998	-	yidJ	b3678	0.71	+0.7
3,856,034	+	yidJ	b3678	0.74	+0.5
3,856,034	+	yidJ	b3678	0.74	-1.7
3,856,042	-	yidJ	b3678	0.74	-0.6
3,856,043	+	yidJ	b3678	0.74	+0.0
3,856,060	-	yidJ	b3678	0.75	+0.6
3,856,104	-	yidJ	b3678	0.78	-0.3
3,856,151	+	yidJ	b3678	0.81	+0.1
3,856,175	+	yidJ	b3678	0.83	-0.2
3,856,180	-	yidJ	b3678	0.83	-0.3
3,856,183	-	yidJ	b3678	0.84	+0.8
3,856,183	-	yidJ	b3678	0.84	-0.1
3,856,227	-	yidJ	b3678	0.87	-0.1
3,856,227	-	yidJ	b3678	0.87	+1.0
3,856,242	-	yidJ	b3678	0.88	-0.0
3,856,270	-	yidJ	b3678	0.89	-1.1
3,856,378	+				+0.5
3,856,423	+				-0.3
3,856,436	-				-1.1
3,856,474	-				-1.5
3,856,532	-				-0.5
3,856,644	+	yidK	b3679	0.13	+0.5
3,856,745	+	yidK	b3679	0.19	+1.3
3,856,745	+	yidK	b3679	0.19	-0.1
3,856,753	-	yidK	b3679	0.19	-0.7
3,856,766	-	yidK	b3679	0.20	+0.3
3,856,783	+	yidK	b3679	0.21	+0.7
3,856,785	-	yidK	b3679	0.21	+1.6
3,856,785	-	yidK	b3679	0.21	-0.1
3,856,787	+	yidK	b3679	0.21	+0.3
3,856,787	+	yidK	b3679	0.21	+0.0
3,856,864	+	yidK	b3679	0.26	+0.2
3,856,864	+	yidK	b3679	0.26	-0.7
3,856,881	+	yidK	b3679	0.27	+1.6
3,856,931	-	yidK	b3679	0.30	+0.8
3,856,972	-	yidK	b3679	0.32	-0.4
3,857,013	+	yidK	b3679	0.34	-0.3
3,857,057	+	yidK	b3679	0.37	+0.1
3,857,093	-	yidK	b3679	0.39	+0.3
3,857,126	+	yidK	b3679	0.41	-0.9
3,857,134	-	yidK	b3679	0.41	+0.5
3,857,134	-	yidK	b3679	0.41	-1.3
3,857,134	-	yidK	b3679	0.41	+0.1
3,857,148	+	yidK	b3679	0.42	+0.0
3,857,169	+	yidK	b3679	0.43	-0.1
3,857,187	+	yidK	b3679	0.44	+0.1
3,857,190	-	yidK	b3679	0.45	-0.7
3,857,195	-	yidK	b3679	0.45	+0.7
3,857,232	-	yidK	b3679	0.47	+2.2
3,857,232	-	yidK	b3679	0.47	-1.0
3,857,262	-	yidK	b3679	0.49	+0.5
3,857,262	-	yidK	b3679	0.49	+0.6
3,857,353	+	yidK	b3679	0.54	+0.5
3,857,361	-	yidK	b3679	0.55	-0.9
3,857,365	+	yidK	b3679	0.55	+0.2
3,857,378	+	yidK	b3679	0.56	+0.3
3,857,378	+	yidK	b3679	0.56	-0.5
3,857,401	-	yidK	b3679	0.57	+0.0