Strain Fitness in Escherichia coli BW25113 around b3151

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
3,294,136	+	yraO	b3149	0.52	+0.5
3,294,157	-	yraO	b3149	0.55	+0.8
3,294,260	+	yraO	b3149	0.73	-0.8
3,294,286	-	yraO	b3149	0.77	+1.7
3,294,286	-	yraO	b3149	0.77	+0.7
3,294,309	-	yraO	b3149	0.81	+0.5
3,294,318	-	yraO	b3149	0.82	+0.3
3,294,353	+	yraO	b3149	0.88	+1.2
3,294,353	+	yraO	b3149	0.88	-0.6
3,294,361	+	yraO	b3149	0.90	+0.8
3,294,361	+	yraO	b3149	0.90	-0.4
3,294,365	+				+1.1
3,294,376	+				-0.2
3,294,376	+				-0.9
3,294,391	-				+0.5
3,294,391	-				-0.4
3,294,415	-				-0.6
3,294,429	+				-0.2
3,294,465	-				+0.1
3,294,481	+				-0.9
3,294,503	-	yraP	b3150	0.12	+0.9
3,294,503	-	yraP	b3150	0.12	-0.6
3,294,510	+	yraP	b3150	0.14	-0.8
3,294,563	-	yraP	b3150	0.23	-0.7
3,294,563	-	yraP	b3150	0.23	+1.1
3,294,612	-	yraP	b3150	0.31	+1.1
3,294,612	-	yraP	b3150	0.31	+1.1
3,294,619	+	yraP	b3150	0.33	+0.1
3,294,680	-	yraP	b3150	0.43	+1.1
3,294,716	-	yraP	b3150	0.49	+0.4
3,294,728	+	yraP	b3150	0.52	-0.3
3,294,728	+	yraP	b3150	0.52	-0.9
3,294,729	+	yraP	b3150	0.52	-0.6
3,294,736	-	yraP	b3150	0.53	+0.1
3,294,736	-	yraP	b3150	0.53	-1.4
3,294,751	+	yraP	b3150	0.56	-1.7
3,294,751	+	yraP	b3150	0.56	+0.6
3,294,787	+	yraP	b3150	0.62	-1.4
3,294,790	-	yraP	b3150	0.62	-0.5
3,294,818	+	yraP	b3150	0.67	-0.3
3,294,966	+				+0.0
3,294,966	+				+1.1
3,294,966	+				+0.4
3,295,019	-				-0.3
3,295,019	-				+0.5
3,295,077	-				-0.8
3,295,079	+				+0.1
3,295,079	+				-0.4
3,295,095	-				-0.6
3,295,159	-				+0.2
3,295,159	-				+0.3
3,295,160	-				+0.6
3,295,222	-				-1.1
3,295,223	-				+0.5
3,295,249	-	yraQ	b3151	0.12	+0.2
3,295,288	+	yraQ	b3151	0.16	+1.0
3,295,350	-	yraQ	b3151	0.22	-0.1
3,295,350	-	yraQ	b3151	0.22	+0.1
3,295,384	+	yraQ	b3151	0.25	+0.3
3,295,392	-	yraQ	b3151	0.26	+0.4
3,295,394	+	yraQ	b3151	0.26	-1.0
3,295,443	+	yraQ	b3151	0.31	-0.5
3,295,443	+	yraQ	b3151	0.31	-0.3
3,295,451	-	yraQ	b3151	0.32	-0.2
3,295,461	-	yraQ	b3151	0.33	+0.4
3,295,559	-	yraQ	b3151	0.42	-0.5
3,295,559	-	yraQ	b3151	0.42	-0.3
3,295,618	-	yraQ	b3151	0.48	-0.9
3,295,633	-	yraQ	b3151	0.49	+1.8
3,295,690	+	yraQ	b3151	0.55	-0.1
3,295,791	-	yraQ	b3151	0.64	+0.9
3,295,791	-	yraQ	b3151	0.64	-0.9
3,295,824	-	yraQ	b3151	0.68	-1.2
3,295,850	+	yraQ	b3151	0.70	+0.2
3,295,911	-	yraQ	b3151	0.76	-0.1
3,295,915	-	yraQ	b3151	0.76	-0.1
3,296,007	+	yraQ	b3151	0.85	-0.0
3,296,053	-	yraQ	b3151	0.90	+0.7
3,296,053	-	yraQ	b3151	0.90	+0.8
3,296,059	-				-0.5
3,296,059	-				+0.4
3,296,196	+				+0.6
3,296,201	+				+1.7
3,296,201	+				+1.1
3,296,221	-				-0.1
3,296,221	-				+0.4
3,296,289	-				+0.4
3,296,289	-				-0.5
3,296,294	-				-0.3
3,296,441	-	yraR	b3152	0.33	-0.7
3,296,441	-	yraR	b3152	0.33	-0.8
3,296,466	-	yraR	b3152	0.37	+0.2
3,296,549	+	yraR	b3152	0.50	+0.9
3,296,661	+	yraR	b3152	0.67	+0.1
3,296,661	+	yraR	b3152	0.67	+0.5
3,296,687	-	yraR	b3152	0.71	-0.1
3,296,737	-	yraR	b3152	0.79	+1.1
3,296,737	-	yraR	b3152	0.79	+1.3
3,296,819	+				-0.7
3,296,819	+				+0.1
3,296,830	+				+0.6
3,296,927	-				-0.5
3,296,992	+				-0.2
3,296,992	+				+0.2
3,297,032	-				+0.7
3,297,149	-	yhbO	b3153	0.29	+0.4
3,297,149	-	yhbO	b3153	0.29	-1.5