Strain Fitness in Escherichia coli BW25113 around b2847
Experiment: syringaldehyde 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 5 mM |
---|---|---|---|---|---|
remove | |||||
2,985,575 | + | +0.3 | |||
2,985,829 | + | yqeH | b2846 | 0.43 | +0.3 |
2,985,916 | + | yqeH | b2846 | 0.57 | -0.7 |
2,986,179 | + | -0.3 | |||
2,986,179 | + | -1.1 | |||
2,986,213 | + | +0.3 | |||
2,986,481 | - | +0.7 | |||
2,986,590 | - | +0.4 | |||
2,986,625 | - | yqeI | b2847 | 0.12 | -0.5 |
2,986,657 | + | yqeI | b2847 | 0.16 | -0.4 |
2,986,674 | - | yqeI | b2847 | 0.19 | +0.3 |
2,986,710 | + | yqeI | b2847 | 0.23 | -1.0 |
2,986,711 | + | yqeI | b2847 | 0.23 | -0.7 |
2,986,715 | + | yqeI | b2847 | 0.24 | -0.7 |
2,986,715 | + | yqeI | b2847 | 0.24 | +0.3 |
2,986,737 | + | yqeI | b2847 | 0.26 | -1.3 |
2,986,745 | - | yqeI | b2847 | 0.27 | -1.9 |
2,986,776 | + | yqeI | b2847 | 0.31 | -0.6 |
2,986,776 | + | yqeI | b2847 | 0.31 | +0.5 |
2,986,783 | + | yqeI | b2847 | 0.32 | -1.2 |
2,986,860 | + | yqeI | b2847 | 0.41 | +0.9 |
2,986,875 | + | yqeI | b2847 | 0.43 | +0.0 |
2,986,882 | + | yqeI | b2847 | 0.44 | -1.3 |
2,986,884 | + | yqeI | b2847 | 0.44 | -1.4 |
2,986,884 | + | yqeI | b2847 | 0.44 | -0.8 |
2,986,886 | + | yqeI | b2847 | 0.45 | +2.1 |
2,986,886 | + | yqeI | b2847 | 0.45 | +1.1 |
2,986,890 | + | yqeI | b2847 | 0.45 | -1.8 |
2,986,892 | + | yqeI | b2847 | 0.45 | -2.5 |
2,986,924 | + | yqeI | b2847 | 0.49 | -0.3 |
2,987,296 | + | +0.0 |
Or see this region's nucleotide sequence