Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4777 and PfGW456L13_4778 are separated by 117 nucleotides PfGW456L13_4778 and PfGW456L13_4779 are separated by 178 nucleotides PfGW456L13_4779 and PfGW456L13_4780 are separated by 2 nucleotides
PfGW456L13_4777 - FIG00960960: hypothetical protein, at 5,324,052 to 5,329,268
_4777
PfGW456L13_4778 - Transcriptional activator MetR, at 5,329,386 to 5,330,303
_4778
PfGW456L13_4779 - acetyltransferase, GNAT family, at 5,330,482 to 5,330,979
_4779
PfGW456L13_4780 - L-lysine permease, at 5,330,982 to 5,331,620
_4780
Position (kb) 5329
5330
5331 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5328.481 kb on + strand, within PfGW456L13_4777 at 5328.482 kb on - strand, within PfGW456L13_4777 at 5328.482 kb on - strand, within PfGW456L13_4777 at 5328.591 kb on + strand, within PfGW456L13_4777 at 5328.591 kb on + strand, within PfGW456L13_4777 at 5328.592 kb on - strand, within PfGW456L13_4777 at 5328.592 kb on - strand, within PfGW456L13_4777 at 5328.592 kb on - strand, within PfGW456L13_4777 at 5328.592 kb on - strand, within PfGW456L13_4777 at 5328.592 kb on - strand, within PfGW456L13_4777 at 5328.884 kb on + strand at 5328.884 kb on + strand at 5328.885 kb on - strand at 5328.924 kb on + strand at 5328.934 kb on - strand at 5329.030 kb on - strand at 5329.030 kb on - strand at 5329.030 kb on - strand at 5329.075 kb on - strand at 5329.089 kb on + strand at 5329.089 kb on + strand at 5329.089 kb on + strand at 5329.089 kb on + strand at 5329.089 kb on + strand at 5329.090 kb on - strand at 5329.266 kb on + strand at 5329.266 kb on + strand at 5329.267 kb on - strand at 5329.271 kb on + strand at 5329.271 kb on + strand at 5329.272 kb on - strand at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.857 kb on + strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.858 kb on - strand, within PfGW456L13_4778 at 5329.875 kb on + strand, within PfGW456L13_4778 at 5329.875 kb on + strand, within PfGW456L13_4778 at 5329.876 kb on - strand, within PfGW456L13_4778 at 5329.876 kb on - strand, within PfGW456L13_4778 at 5329.876 kb on - strand, within PfGW456L13_4778 at 5329.876 kb on - strand, within PfGW456L13_4778 at 5329.876 kb on - strand, within PfGW456L13_4778 at 5329.876 kb on - strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.926 kb on + strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.927 kb on - strand, within PfGW456L13_4778 at 5329.928 kb on + strand, within PfGW456L13_4778 at 5329.928 kb on + strand, within PfGW456L13_4778 at 5329.928 kb on + strand, within PfGW456L13_4778 at 5329.928 kb on + strand, within PfGW456L13_4778 at 5329.928 kb on + strand, within PfGW456L13_4778 at 5329.928 kb on + strand, within PfGW456L13_4778 at 5329.928 kb on + strand, within PfGW456L13_4778 at 5329.929 kb on - strand, within PfGW456L13_4778 at 5329.929 kb on - strand, within PfGW456L13_4778 at 5329.968 kb on + strand, within PfGW456L13_4778 at 5330.130 kb on + strand, within PfGW456L13_4778 at 5330.131 kb on - strand, within PfGW456L13_4778 at 5330.131 kb on - strand, within PfGW456L13_4778 at 5330.131 kb on - strand, within PfGW456L13_4778 at 5330.145 kb on + strand, within PfGW456L13_4778 at 5330.145 kb on + strand, within PfGW456L13_4778 at 5330.145 kb on + strand, within PfGW456L13_4778 at 5330.145 kb on + strand, within PfGW456L13_4778 at 5330.145 kb on + strand, within PfGW456L13_4778 at 5330.146 kb on - strand, within PfGW456L13_4778 at 5330.146 kb on - strand, within PfGW456L13_4778 at 5330.146 kb on - strand, within PfGW456L13_4778 at 5330.146 kb on - strand, within PfGW456L13_4778 at 5330.146 kb on - strand, within PfGW456L13_4778 at 5330.193 kb on + strand, within PfGW456L13_4778 at 5330.193 kb on + strand, within PfGW456L13_4778 at 5330.193 kb on + strand, within PfGW456L13_4778 at 5330.193 kb on + strand, within PfGW456L13_4778 at 5330.229 kb on + strand at 5330.230 kb on - strand at 5330.230 kb on - strand at 5330.461 kb on + strand at 5330.461 kb on + strand at 5330.461 kb on + strand at 5330.462 kb on - strand at 5330.462 kb on - strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.472 kb on + strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.473 kb on - strand at 5330.483 kb on + strand at 5330.483 kb on + strand at 5330.484 kb on - strand at 5330.484 kb on - strand at 5330.484 kb on - strand at 5330.484 kb on - strand at 5330.516 kb on + strand at 5330.516 kb on + strand at 5330.517 kb on - strand at 5330.517 kb on - strand at 5330.580 kb on - strand, within PfGW456L13_4779 at 5330.681 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.717 kb on + strand, within PfGW456L13_4779 at 5330.718 kb on - strand, within PfGW456L13_4779 at 5330.718 kb on - strand, within PfGW456L13_4779 at 5330.718 kb on - strand, within PfGW456L13_4779 at 5330.718 kb on - strand, within PfGW456L13_4779 at 5330.718 kb on - strand, within PfGW456L13_4779 at 5330.718 kb on - strand, within PfGW456L13_4779 at 5330.915 kb on + strand, within PfGW456L13_4779 at 5330.916 kb on - strand, within PfGW456L13_4779 at 5330.916 kb on - strand, within PfGW456L13_4779 at 5330.940 kb on - strand at 5331.033 kb on + strand at 5331.033 kb on + strand at 5331.034 kb on - strand at 5331.034 kb on - strand at 5331.049 kb on + strand, within PfGW456L13_4780 at 5331.229 kb on + strand, within PfGW456L13_4780 at 5331.229 kb on + strand, within PfGW456L13_4780 at 5331.229 kb on + strand, within PfGW456L13_4780 at 5331.229 kb on + strand, within PfGW456L13_4780 at 5331.229 kb on + strand, within PfGW456L13_4780 at 5331.230 kb on - strand, within PfGW456L13_4780 at 5331.230 kb on - strand, within PfGW456L13_4780
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 5,328,481 + PfGW456L13_4777 0.85 -0.3 5,328,482 - PfGW456L13_4777 0.85 +0.1 5,328,482 - PfGW456L13_4777 0.85 -0.2 5,328,591 + PfGW456L13_4777 0.87 -0.6 5,328,591 + PfGW456L13_4777 0.87 -0.3 5,328,592 - PfGW456L13_4777 0.87 +1.3 5,328,592 - PfGW456L13_4777 0.87 +0.6 5,328,592 - PfGW456L13_4777 0.87 -0.7 5,328,592 - PfGW456L13_4777 0.87 -1.4 5,328,592 - PfGW456L13_4777 0.87 +0.6 5,328,884 + +0.3 5,328,884 + +0.1 5,328,885 - -0.0 5,328,924 + -2.2 5,328,934 - -0.7 5,329,030 - -1.9 5,329,030 - +0.5 5,329,030 - +1.9 5,329,075 - +0.4 5,329,089 + -1.2 5,329,089 + -1.3 5,329,089 + -0.0 5,329,089 + -0.5 5,329,089 + +0.4 5,329,090 - -0.9 5,329,266 + +0.5 5,329,266 + +0.9 5,329,267 - +0.4 5,329,271 + -0.4 5,329,271 + -0.3 5,329,272 - -0.6 5,329,857 + PfGW456L13_4778 0.51 -0.2 5,329,857 + PfGW456L13_4778 0.51 -0.9 5,329,857 + PfGW456L13_4778 0.51 -0.1 5,329,857 + PfGW456L13_4778 0.51 +0.2 5,329,857 + PfGW456L13_4778 0.51 +0.3 5,329,857 + PfGW456L13_4778 0.51 -0.2 5,329,857 + PfGW456L13_4778 0.51 -0.6 5,329,857 + PfGW456L13_4778 0.51 -0.6 5,329,857 + PfGW456L13_4778 0.51 -1.6 5,329,857 + PfGW456L13_4778 0.51 -1.0 5,329,857 + PfGW456L13_4778 0.51 -0.4 5,329,857 + PfGW456L13_4778 0.51 -1.8 5,329,857 + PfGW456L13_4778 0.51 -0.9 5,329,857 + PfGW456L13_4778 0.51 +0.1 5,329,857 + PfGW456L13_4778 0.51 -0.3 5,329,857 + PfGW456L13_4778 0.51 -0.3 5,329,857 + PfGW456L13_4778 0.51 -0.9 5,329,857 + PfGW456L13_4778 0.51 -0.4 5,329,857 + PfGW456L13_4778 0.51 -0.6 5,329,857 + PfGW456L13_4778 0.51 -1.6 5,329,857 + PfGW456L13_4778 0.51 -0.9 5,329,857 + PfGW456L13_4778 0.51 -0.9 5,329,857 + PfGW456L13_4778 0.51 +0.2 5,329,858 - PfGW456L13_4778 0.51 -0.7 5,329,858 - PfGW456L13_4778 0.51 -1.1 5,329,858 - PfGW456L13_4778 0.51 +0.2 5,329,858 - PfGW456L13_4778 0.51 -0.9 5,329,858 - PfGW456L13_4778 0.51 -1.9 5,329,858 - PfGW456L13_4778 0.51 -2.0 5,329,858 - PfGW456L13_4778 0.51 -0.7 5,329,858 - PfGW456L13_4778 0.51 -2.4 5,329,858 - PfGW456L13_4778 0.51 +0.3 5,329,858 - PfGW456L13_4778 0.51 -0.7 5,329,858 - PfGW456L13_4778 0.51 -1.9 5,329,858 - PfGW456L13_4778 0.51 -2.0 5,329,858 - PfGW456L13_4778 0.51 -1.7 5,329,858 - PfGW456L13_4778 0.51 -1.3 5,329,858 - PfGW456L13_4778 0.51 -0.9 5,329,858 - PfGW456L13_4778 0.51 -1.0 5,329,858 - PfGW456L13_4778 0.51 +1.2 5,329,858 - PfGW456L13_4778 0.51 +0.5 5,329,875 + PfGW456L13_4778 0.53 -0.3 5,329,875 + PfGW456L13_4778 0.53 -1.1 5,329,876 - PfGW456L13_4778 0.53 -0.8 5,329,876 - PfGW456L13_4778 0.53 -1.4 5,329,876 - PfGW456L13_4778 0.53 -0.6 5,329,876 - PfGW456L13_4778 0.53 -0.2 5,329,876 - PfGW456L13_4778 0.53 -1.3 5,329,876 - PfGW456L13_4778 0.53 -1.1 5,329,926 + PfGW456L13_4778 0.59 -2.3 5,329,926 + PfGW456L13_4778 0.59 -1.2 5,329,926 + PfGW456L13_4778 0.59 -1.8 5,329,926 + PfGW456L13_4778 0.59 -3.1 5,329,926 + -0.3 5,329,926 + PfGW456L13_4778 0.59 -0.5 5,329,926 + PfGW456L13_4778 0.59 -1.3 5,329,926 + PfGW456L13_4778 0.59 -0.4 5,329,926 + PfGW456L13_4778 0.59 -0.2 5,329,926 + PfGW456L13_4778 0.59 -0.7 5,329,926 + PfGW456L13_4778 0.59 +0.1 5,329,926 + PfGW456L13_4778 0.59 -0.5 5,329,926 + PfGW456L13_4778 0.59 -0.9 5,329,926 + PfGW456L13_4778 0.59 -3.2 5,329,927 - PfGW456L13_4778 0.59 -0.7 5,329,927 - PfGW456L13_4778 0.59 -0.8 5,329,927 - PfGW456L13_4778 0.59 -1.6 5,329,927 - PfGW456L13_4778 0.59 -1.1 5,329,927 - PfGW456L13_4778 0.59 -0.7 5,329,927 - PfGW456L13_4778 0.59 +0.0 5,329,927 - PfGW456L13_4778 0.59 -1.7 5,329,927 - PfGW456L13_4778 0.59 +0.3 5,329,927 - PfGW456L13_4778 0.59 -1.0 5,329,927 - PfGW456L13_4778 0.59 -1.3 5,329,927 - PfGW456L13_4778 0.59 +0.3 5,329,927 - PfGW456L13_4778 0.59 +0.8 5,329,927 - PfGW456L13_4778 0.59 -1.2 5,329,927 - PfGW456L13_4778 0.59 -2.6 5,329,928 + PfGW456L13_4778 0.59 -1.2 5,329,928 + PfGW456L13_4778 0.59 -0.9 5,329,928 + PfGW456L13_4778 0.59 -1.6 5,329,928 + PfGW456L13_4778 0.59 -0.6 5,329,928 + PfGW456L13_4778 0.59 -0.3 5,329,928 + PfGW456L13_4778 0.59 -1.3 5,329,928 + PfGW456L13_4778 0.59 -1.6 5,329,929 - PfGW456L13_4778 0.59 -0.9 5,329,929 - PfGW456L13_4778 0.59 -2.0 5,329,968 + PfGW456L13_4778 0.63 -2.5 5,330,130 + PfGW456L13_4778 0.81 -2.3 5,330,131 - PfGW456L13_4778 0.81 -3.4 5,330,131 - PfGW456L13_4778 0.81 -2.1 5,330,131 - PfGW456L13_4778 0.81 -1.5 5,330,145 + PfGW456L13_4778 0.83 -0.5 5,330,145 + PfGW456L13_4778 0.83 -0.4 5,330,145 + PfGW456L13_4778 0.83 +0.2 5,330,145 + PfGW456L13_4778 0.83 -0.7 5,330,145 + PfGW456L13_4778 0.83 -0.7 5,330,146 - PfGW456L13_4778 0.83 +0.8 5,330,146 - PfGW456L13_4778 0.83 -0.5 5,330,146 - PfGW456L13_4778 0.83 -0.4 5,330,146 - PfGW456L13_4778 0.83 -1.0 5,330,146 - PfGW456L13_4778 0.83 -0.7 5,330,193 + PfGW456L13_4778 0.88 -0.1 5,330,193 + PfGW456L13_4778 0.88 +0.4 5,330,193 + PfGW456L13_4778 0.88 -0.5 5,330,193 + PfGW456L13_4778 0.88 +0.0 5,330,229 + -1.2 5,330,230 - -2.1 5,330,230 - +0.3 5,330,461 + -0.6 5,330,461 + +0.6 5,330,461 + +1.7 5,330,462 - +0.7 5,330,462 - +0.1 5,330,472 + -0.3 5,330,472 + +1.0 5,330,472 + +0.2 5,330,472 + +0.5 5,330,472 + +0.0 5,330,472 + +0.5 5,330,472 + +0.8 5,330,472 + -0.4 5,330,472 + +0.7 5,330,472 + +0.4 5,330,472 + -0.0 5,330,472 + +0.4 5,330,472 + +1.3 5,330,472 + +1.2 5,330,472 + +0.3 5,330,473 - -0.2 5,330,473 - +0.6 5,330,473 - -0.1 5,330,473 - -0.0 5,330,473 - -0.9 5,330,473 - -0.2 5,330,473 - -0.1 5,330,473 - +0.7 5,330,473 - -1.3 5,330,473 - -1.1 5,330,473 - -2.1 5,330,473 - +0.5 5,330,473 - -1.7 5,330,473 - -0.4 5,330,473 - +1.8 5,330,483 + +0.6 5,330,483 + +0.6 5,330,484 - -0.1 5,330,484 - +0.7 5,330,484 - -0.7 5,330,484 - +0.0 5,330,516 + +0.4 5,330,516 + +0.1 5,330,517 - -0.4 5,330,517 - +0.5 5,330,580 - PfGW456L13_4779 0.20 -0.7 5,330,681 + PfGW456L13_4779 0.40 -0.7 5,330,717 + PfGW456L13_4779 0.47 +0.5 5,330,717 + PfGW456L13_4779 0.47 -0.2 5,330,717 + PfGW456L13_4779 0.47 +0.2 5,330,717 + PfGW456L13_4779 0.47 +0.5 5,330,717 + PfGW456L13_4779 0.47 +1.2 5,330,717 + PfGW456L13_4779 0.47 -1.2 5,330,717 + PfGW456L13_4779 0.47 +0.3 5,330,717 + PfGW456L13_4779 0.47 +0.3 5,330,717 + PfGW456L13_4779 0.47 -0.5 5,330,717 + PfGW456L13_4779 0.47 +0.0 5,330,718 - PfGW456L13_4779 0.47 -0.3 5,330,718 - PfGW456L13_4779 0.47 -0.9 5,330,718 - PfGW456L13_4779 0.47 +1.0 5,330,718 - PfGW456L13_4779 0.47 -0.2 5,330,718 - PfGW456L13_4779 0.47 -1.2 5,330,718 - PfGW456L13_4779 0.47 -2.1 5,330,915 + PfGW456L13_4779 0.87 +0.3 5,330,916 - PfGW456L13_4779 0.87 -1.1 5,330,916 - PfGW456L13_4779 0.87 -0.0 5,330,940 - +0.1 5,331,033 + +0.5 5,331,033 + -0.7 5,331,034 - +0.1 5,331,034 - -0.0 5,331,049 + PfGW456L13_4780 0.10 -0.6 5,331,229 + PfGW456L13_4780 0.39 +0.2 5,331,229 + PfGW456L13_4780 0.39 +0.5 5,331,229 + PfGW456L13_4780 0.39 -0.5 5,331,229 + PfGW456L13_4780 0.39 -0.4 5,331,229 + PfGW456L13_4780 0.39 +0.7 5,331,230 - PfGW456L13_4780 0.39 -2.3 5,331,230 - PfGW456L13_4780 0.39 +1.5
Or see this region's nucleotide sequence