Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4398

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
4,911,541	+		PfGW456L13_4396	0.85	-0.3
4,911,570	-		PfGW456L13_4396	0.88	+0.3
4,911,623	+				-1.4
4,911,623	+				+0.1
4,911,623	+				+0.7
4,911,623	+				-0.6
4,911,623	+				-0.8
4,911,624	-				-0.2
4,911,624	-				+0.9
4,911,624	-				-1.9
4,911,714	-				+0.2
4,911,714	-				+0.7
4,911,714	-				+0.4
4,911,851	+				-0.3
4,911,851	+				-0.3
4,911,852	-				+0.1
4,911,852	-				-0.0
4,911,860	-				-0.3
4,911,862	-				+0.6
4,911,891	+				+0.2
4,911,892	-				+0.1
4,911,892	-				-1.2
4,911,892	-				+0.5
4,911,921	-				-0.3
4,911,940	-				-0.0
4,911,952	+				-2.0
4,911,952	+				-0.7
4,911,953	-				+1.1
4,911,953	-				-0.2
4,911,961	+				-0.6
4,911,961	+				+0.2
4,911,961	+				-0.2
4,911,961	+				+1.1
4,911,961	+				+0.2
4,911,961	+				-0.5
4,911,962	-				+0.9
4,911,962	-				-0.5
4,911,962	-				+0.7
4,911,962	-				-1.1
4,911,962	-				-0.1
4,911,962	-				-0.3
4,911,962	-				-1.3
4,911,962	-				+1.0
4,911,973	+				+0.1
4,912,005	-				+1.3
4,912,005	-				-1.7
4,912,030	+				-0.8
4,912,030	+				+0.5
4,912,030	+				-1.1
4,912,031	-				-1.5
4,912,031	-				+0.5
4,912,395	-				-0.2
4,912,433	+				+0.2
4,912,438	+				+0.8
4,912,438	+				-0.3
4,912,438	+				+0.9
4,912,438	+				+0.3
4,912,439	-				-0.7
4,912,439	-				-0.2
4,912,447	+				+0.4
4,912,447	+				+0.0
4,912,447	+				-1.4
4,912,447	+				-0.3
4,912,447	+				-1.0
4,912,447	+				+0.4
4,912,447	+				+0.1
4,912,448	-				-0.1
4,912,448	-				+0.3
4,912,451	+				-1.8
4,912,451	+				-2.1
4,912,451	+				-0.8
4,912,451	+				-2.0
4,912,451	+				+0.8
4,912,452	-				+1.0
4,912,452	-				-0.0
4,912,461	+				-0.1
4,912,580	-				+0.8
4,912,580	-				-1.2
4,912,580	-				+1.1
4,912,590	+				+0.1
4,912,591	-				-0.0
4,912,651	-		PfGW456L13_4398	0.14	+0.1
4,912,651	-		PfGW456L13_4398	0.14	-0.4
4,912,651	-		PfGW456L13_4398	0.14	-0.7
4,912,651	-		PfGW456L13_4398	0.14	+0.3
4,912,677	+		PfGW456L13_4398	0.17	+0.6
4,912,725	+		PfGW456L13_4398	0.20	+0.3
4,912,725	+		PfGW456L13_4398	0.20	-0.4
4,912,725	+		PfGW456L13_4398	0.20	-0.3
4,912,725	+		PfGW456L13_4398	0.20	-0.6
4,912,725	+		PfGW456L13_4398	0.20	+0.6
4,912,725	+		PfGW456L13_4398	0.20	+0.7
4,912,725	+		PfGW456L13_4398	0.20	+0.8
4,912,725	+		PfGW456L13_4398	0.20	-0.3
4,912,725	+		PfGW456L13_4398	0.20	+0.6
4,912,725	+		PfGW456L13_4398	0.20	+0.8
4,912,725	+		PfGW456L13_4398	0.20	+0.3
4,912,725	+		PfGW456L13_4398	0.20	-0.0
4,912,725	+		PfGW456L13_4398	0.20	-0.5
4,912,725	+		PfGW456L13_4398	0.20	+0.2
4,912,725	+		PfGW456L13_4398	0.20	-1.7
4,912,725	+		PfGW456L13_4398	0.20	+1.5
4,912,725	+		PfGW456L13_4398	0.20	-0.9
4,912,726	-		PfGW456L13_4398	0.21	-0.2
4,912,726	-		PfGW456L13_4398	0.21	+0.7
4,912,726	-		PfGW456L13_4398	0.21	-1.5
4,912,726	-		PfGW456L13_4398	0.21	+0.2
4,912,726	-		PfGW456L13_4398	0.21	+0.8
4,912,726	-		PfGW456L13_4398	0.21	-0.8
4,912,726	-		PfGW456L13_4398	0.21	-0.0
4,912,726	-		PfGW456L13_4398	0.21	+1.1
4,912,726	-		PfGW456L13_4398	0.21	-0.7
4,912,726	-		PfGW456L13_4398	0.21	+0.8
4,912,726	-		PfGW456L13_4398	0.21	-0.4
4,912,726	-		PfGW456L13_4398	0.21	-0.2
4,912,726	-		PfGW456L13_4398	0.21	-0.4
4,912,726	-		PfGW456L13_4398	0.21	-2.9
4,912,726	-		PfGW456L13_4398	0.21	-1.0
4,912,942	-		PfGW456L13_4398	0.39	-0.3
4,912,942	-		PfGW456L13_4398	0.39	-0.9
4,913,023	+		PfGW456L13_4398	0.45	+0.5
4,913,023	+		PfGW456L13_4398	0.45	+0.2
4,913,023	+		PfGW456L13_4398	0.45	-0.5
4,913,023	+		PfGW456L13_4398	0.45	+0.3
4,913,023	+		PfGW456L13_4398	0.45	-2.1
4,913,023	+				+1.1
4,913,023	+		PfGW456L13_4398	0.45	+0.3
4,913,023	+		PfGW456L13_4398	0.45	-0.8
4,913,023	+		PfGW456L13_4398	0.45	-2.3
4,913,024	-		PfGW456L13_4398	0.45	-0.0
4,913,024	-		PfGW456L13_4398	0.45	-1.4
4,913,024	-		PfGW456L13_4398	0.45	+1.0
4,913,024	-		PfGW456L13_4398	0.45	+0.5
4,913,024	-		PfGW456L13_4398	0.45	+0.4
4,913,024	-		PfGW456L13_4398	0.45	+0.0
4,913,024	-		PfGW456L13_4398	0.45	+0.5
4,913,024	-		PfGW456L13_4398	0.45	-0.3
4,913,193	+		PfGW456L13_4398	0.59	-0.1
4,913,193	+		PfGW456L13_4398	0.59	+1.2
4,913,193	+		PfGW456L13_4398	0.59	-0.5
4,913,193	+		PfGW456L13_4398	0.59	-0.3
4,913,193	+		PfGW456L13_4398	0.59	-0.8
4,913,193	+		PfGW456L13_4398	0.59	+0.1
4,913,193	+		PfGW456L13_4398	0.59	+0.5
4,913,194	-		PfGW456L13_4398	0.60	-0.4
4,913,194	-		PfGW456L13_4398	0.60	+0.8
4,913,194	-		PfGW456L13_4398	0.60	+0.3
4,913,194	-		PfGW456L13_4398	0.60	+0.4
4,913,194	-		PfGW456L13_4398	0.60	+0.4
4,913,194	-		PfGW456L13_4398	0.60	-1.5
4,913,194	-		PfGW456L13_4398	0.60	-0.1
4,913,196	+		PfGW456L13_4398	0.60	-0.0
4,913,196	+		PfGW456L13_4398	0.60	+1.0
4,913,197	-		PfGW456L13_4398	0.60	+0.6
4,913,197	-		PfGW456L13_4398	0.60	+0.1
4,913,234	-		PfGW456L13_4398	0.63	+0.2
4,913,234	-		PfGW456L13_4398	0.63	+0.9
4,913,496	+		PfGW456L13_4398	0.85	-0.9
4,913,626	+				-2.4
4,913,626	+				-0.1
4,913,626	+				+0.3
4,913,626	+				-0.9
4,913,627	-				-0.9
4,913,627	-				-0.4
4,913,627	-				-1.6
4,913,627	-				+0.3
4,913,628	+				-1.3
4,913,628	+				+0.3
4,913,628	+				-1.4
4,913,629	-				+2.1
4,913,629	-				+0.6
4,913,629	-				-0.5
4,913,629	-				-1.8
4,913,629	-				-0.8
4,913,677	-				+0.6
4,914,129	+				+0.5
4,914,129	+				-0.3
4,914,129	+				-0.5
4,914,129	+				+0.1
4,914,129	+				+0.7
4,914,130	-				-1.7
4,914,130	-				+0.1
4,914,130	-				-1.9
4,914,130	-				+0.7
4,914,263	+				+0.7
4,914,263	+				+0.7
4,914,263	+				-0.9
4,914,264	-				-0.8
4,914,264	-				-0.1
4,914,264	-				+0.1
4,914,264	-				-1.3
4,914,329	+				-0.2
4,914,329	+				+1.2
4,914,330	-				+0.9
4,914,330	-				+0.9
4,914,392	+				-0.4
4,914,432	-				-0.2
4,914,484	+		PfGW456L13_4400	0.11	-1.0
4,914,485	-		PfGW456L13_4400	0.11	+0.5
4,914,503	+		PfGW456L13_4400	0.12	-0.0
4,914,503	+		PfGW456L13_4400	0.12	-0.2
4,914,503	+		PfGW456L13_4400	0.12	+0.6
4,914,503	+		PfGW456L13_4400	0.12	+1.5
4,914,503	+		PfGW456L13_4400	0.12	-2.5
4,914,503	+		PfGW456L13_4400	0.12	-0.3
4,914,503	+		PfGW456L13_4400	0.12	-0.8
4,914,503	+		PfGW456L13_4400	0.12	+0.7
4,914,503	+		PfGW456L13_4400	0.12	-0.4
4,914,503	+		PfGW456L13_4400	0.12	+0.9
4,914,503	+		PfGW456L13_4400	0.12	-0.6
4,914,503	+		PfGW456L13_4400	0.12	+0.8
4,914,503	+		PfGW456L13_4400	0.12	+1.8
4,914,504	-		PfGW456L13_4400	0.12	-1.3
4,914,504	-		PfGW456L13_4400	0.12	+0.3
4,914,504	-		PfGW456L13_4400	0.12	+0.6
4,914,504	-		PfGW456L13_4400	0.12	-0.5
4,914,504	-		PfGW456L13_4400	0.12	-1.0
4,914,504	-		PfGW456L13_4400	0.12	+0.4
4,914,504	-		PfGW456L13_4400	0.12	+0.4
4,914,504	-		PfGW456L13_4400	0.12	-0.3
4,914,504	-		PfGW456L13_4400	0.12	-0.1
4,914,504	-		PfGW456L13_4400	0.12	-0.5
4,914,588	-		PfGW456L13_4400	0.18	+0.5
4,914,588	-		PfGW456L13_4400	0.18	-0.1
4,914,668	+		PfGW456L13_4400	0.24	+0.7