Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3115

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
3,485,273	-		PfGW456L13_3113	0.65	-0.1
3,485,352	+		PfGW456L13_3113	0.75	+0.1
3,485,352	+		PfGW456L13_3113	0.75	+0.2
3,485,352	+		PfGW456L13_3113	0.75	-0.8
3,485,353	-		PfGW456L13_3113	0.75	-0.2
3,485,361	-		PfGW456L13_3113	0.76	-0.5
3,485,523	-				+0.3
3,485,523	-				-0.1
3,485,542	-				+0.8
3,485,551	+				+2.7
3,485,552	-				+1.0
3,485,552	-				+0.0
3,485,552	-				+0.7
3,485,552	-				+0.8
3,485,552	-				-1.3
3,485,552	-				-1.0
3,485,552	-				-0.1
3,485,589	+				-1.8
3,485,639	+				-1.2
3,485,639	+				+1.3
3,485,640	-				+1.6
3,485,640	-				+0.1
3,485,699	+		PfGW456L13_3114	0.14	-0.5
3,485,699	+		PfGW456L13_3114	0.14	-2.1
3,485,700	-		PfGW456L13_3114	0.14	+0.5
3,485,700	-		PfGW456L13_3114	0.14	-0.2
3,485,700	-		PfGW456L13_3114	0.14	-1.0
3,485,700	-		PfGW456L13_3114	0.14	-0.1
3,485,700	-		PfGW456L13_3114	0.14	+0.6
3,485,700	-		PfGW456L13_3114	0.14	+1.0
3,485,700	-		PfGW456L13_3114	0.14	-0.2
3,485,700	-		PfGW456L13_3114	0.14	+0.3
3,485,711	-		PfGW456L13_3114	0.17	-0.1
3,485,711	-		PfGW456L13_3114	0.17	-0.1
3,485,847	-		PfGW456L13_3114	0.48	+0.1
3,485,965	-		PfGW456L13_3114	0.75	-0.3
3,485,993	+		PfGW456L13_3114	0.82	-0.0
3,485,993	+		PfGW456L13_3114	0.82	-0.6
3,485,993	+		PfGW456L13_3114	0.82	+1.8
3,485,994	-		PfGW456L13_3114	0.82	+0.9
3,485,994	-		PfGW456L13_3114	0.82	+1.3
3,485,994	-				-1.1
3,485,994	-		PfGW456L13_3114	0.82	+1.0
3,485,994	-		PfGW456L13_3114	0.82	+0.6
3,486,027	+		PfGW456L13_3114	0.89	+0.2
3,486,028	-		PfGW456L13_3114	0.90	-0.7
3,486,028	-		PfGW456L13_3114	0.90	-0.5
3,486,028	-		PfGW456L13_3114	0.90	+1.0
3,486,029	+				+1.5
3,486,030	-				+0.6
3,486,030	-				+0.2
3,486,030	-				-0.2
3,486,168	+				+0.1
3,486,168	+				-0.2
3,486,270	-				-1.5
3,486,293	-				+1.2
3,486,293	-				-0.1
3,486,293	-				+0.6
3,486,295	+				-0.7
3,486,295	+				-1.1
3,486,380	+		PfGW456L13_3115	0.10	+0.1
3,486,381	-		PfGW456L13_3115	0.10	+0.1
3,486,435	+		PfGW456L13_3115	0.14	-0.5
3,486,435	+		PfGW456L13_3115	0.14	-0.8
3,486,484	+		PfGW456L13_3115	0.17	-0.3
3,486,485	-		PfGW456L13_3115	0.18	+1.1
3,486,601	-		PfGW456L13_3115	0.26	-2.7
3,486,601	-		PfGW456L13_3115	0.26	-0.5
3,486,601	-		PfGW456L13_3115	0.26	+0.1
3,486,601	-		PfGW456L13_3115	0.26	-1.5
3,486,601	-		PfGW456L13_3115	0.26	+0.5
3,486,601	-		PfGW456L13_3115	0.26	-0.4
3,486,628	+		PfGW456L13_3115	0.28	+0.1
3,486,628	+		PfGW456L13_3115	0.28	-0.5
3,486,629	-		PfGW456L13_3115	0.28	-1.3
3,486,629	-		PfGW456L13_3115	0.28	-2.4
3,486,629	-		PfGW456L13_3115	0.28	-2.8
3,486,721	+		PfGW456L13_3115	0.34	-2.3
3,486,722	-		PfGW456L13_3115	0.34	-0.5
3,486,870	+		PfGW456L13_3115	0.44	+0.8
3,486,870	+		PfGW456L13_3115	0.44	+0.5
3,486,870	+		PfGW456L13_3115	0.44	-0.1
3,486,870	+		PfGW456L13_3115	0.44	-0.1
3,486,871	-		PfGW456L13_3115	0.45	-1.8
3,486,871	-		PfGW456L13_3115	0.45	+0.3
3,486,871	-		PfGW456L13_3115	0.45	-0.8
3,486,871	-		PfGW456L13_3115	0.45	-0.9
3,486,871	-		PfGW456L13_3115	0.45	+0.1
3,486,949	+		PfGW456L13_3115	0.50	-0.1
3,486,949	+		PfGW456L13_3115	0.50	-0.2
3,486,950	-		PfGW456L13_3115	0.50	+0.3
3,486,950	-		PfGW456L13_3115	0.50	-0.5
3,486,961	+		PfGW456L13_3115	0.51	+0.7
3,486,961	+		PfGW456L13_3115	0.51	+0.5
3,486,961	+		PfGW456L13_3115	0.51	+0.7
3,486,961	+		PfGW456L13_3115	0.51	+1.0
3,486,961	+		PfGW456L13_3115	0.51	-1.0
3,486,961	+		PfGW456L13_3115	0.51	-2.3
3,486,961	+		PfGW456L13_3115	0.51	+0.8
3,486,961	+		PfGW456L13_3115	0.51	+1.2
3,486,962	-		PfGW456L13_3115	0.51	+0.9
3,486,962	-		PfGW456L13_3115	0.51	+1.7
3,486,962	-		PfGW456L13_3115	0.51	-0.8
3,486,962	-		PfGW456L13_3115	0.51	-0.3
3,486,962	-		PfGW456L13_3115	0.51	-1.0
3,486,962	-		PfGW456L13_3115	0.51	-1.2
3,486,962	-		PfGW456L13_3115	0.51	-1.9
3,486,962	-		PfGW456L13_3115	0.51	+0.8
3,486,962	-		PfGW456L13_3115	0.51	-1.5
3,486,963	+		PfGW456L13_3115	0.51	+0.7
3,486,963	+		PfGW456L13_3115	0.51	+0.3
3,486,963	+		PfGW456L13_3115	0.51	-0.8
3,486,963	+		PfGW456L13_3115	0.51	-0.9
3,487,086	+		PfGW456L13_3115	0.60	-0.8
3,487,086	+		PfGW456L13_3115	0.60	+0.5
3,487,087	-		PfGW456L13_3115	0.60	-1.6
3,487,087	-		PfGW456L13_3115	0.60	+0.9
3,487,087	-		PfGW456L13_3115	0.60	-0.1
3,487,095	+		PfGW456L13_3115	0.60	+0.1
3,487,095	+		PfGW456L13_3115	0.60	+0.6
3,487,095	+		PfGW456L13_3115	0.60	-0.5
3,487,095	+		PfGW456L13_3115	0.60	-0.2
3,487,095	+		PfGW456L13_3115	0.60	+0.5
3,487,095	+		PfGW456L13_3115	0.60	+1.3
3,487,095	+		PfGW456L13_3115	0.60	-1.7
3,487,095	+		PfGW456L13_3115	0.60	+0.1
3,487,095	+		PfGW456L13_3115	0.60	+2.2
3,487,096	-		PfGW456L13_3115	0.60	-0.1
3,487,096	-		PfGW456L13_3115	0.60	-0.6
3,487,096	-		PfGW456L13_3115	0.60	+0.8
3,487,096	-		PfGW456L13_3115	0.60	+1.5
3,487,096	-		PfGW456L13_3115	0.60	-0.5
3,487,096	-		PfGW456L13_3115	0.60	+2.5
3,487,096	-		PfGW456L13_3115	0.60	-0.1
3,487,098	+		PfGW456L13_3115	0.60	+0.2
3,487,098	+		PfGW456L13_3115	0.60	-0.4
3,487,098	+		PfGW456L13_3115	0.60	-1.1
3,487,099	-		PfGW456L13_3115	0.60	-0.1
3,487,099	-		PfGW456L13_3115	0.60	+0.6
3,487,099	-		PfGW456L13_3115	0.60	-0.4
3,487,130	-		PfGW456L13_3115	0.63	+0.0
3,487,210	+		PfGW456L13_3115	0.68	-0.5
3,487,210	+		PfGW456L13_3115	0.68	-0.3
3,487,210	+		PfGW456L13_3115	0.68	-1.3
3,487,210	+		PfGW456L13_3115	0.68	-1.3
3,487,210	+		PfGW456L13_3115	0.68	-0.0
3,487,211	-		PfGW456L13_3115	0.68	+0.8
3,487,211	-		PfGW456L13_3115	0.68	+0.5
3,487,211	-		PfGW456L13_3115	0.68	+0.2
3,487,336	+				+1.3
3,487,336	+		PfGW456L13_3115	0.77	-0.8
3,487,336	+		PfGW456L13_3115	0.77	+1.4
3,487,337	-		PfGW456L13_3115	0.77	-1.5
3,487,616	-				-0.8
3,487,616	-				+0.3
3,487,616	-				+0.6
3,487,668	+				-0.7
3,487,748	-				-1.7
3,487,860	-				+1.6
3,487,909	-				-1.8
3,487,956	-				-0.5
3,488,266	-		PfGW456L13_3116	0.42	-0.5
3,488,275	+		PfGW456L13_3116	0.43	+0.7
3,488,275	+		PfGW456L13_3116	0.43	-1.9
3,488,275	+		PfGW456L13_3116	0.43	-0.7
3,488,275	+		PfGW456L13_3116	0.43	+0.5
3,488,276	-		PfGW456L13_3116	0.43	-1.0
3,488,276	-		PfGW456L13_3116	0.43	-0.0
3,488,276	-		PfGW456L13_3116	0.43	-0.2
3,488,276	-		PfGW456L13_3116	0.43	+0.1
3,488,276	-		PfGW456L13_3116	0.43	+1.2
3,488,276	-		PfGW456L13_3116	0.43	+1.4
3,488,276	-		PfGW456L13_3116	0.43	+0.8
3,488,276	-		PfGW456L13_3116	0.43	-0.7
3,488,282	-		PfGW456L13_3116	0.44	+0.7
3,488,282	-		PfGW456L13_3116	0.44	+1.5
3,488,282	-		PfGW456L13_3116	0.44	+0.3
3,488,411	+		PfGW456L13_3116	0.63	-1.1
3,488,501	-		PfGW456L13_3116	0.77	-1.5
3,488,501	-		PfGW456L13_3116	0.77	-1.4