Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2740

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
3,036,801	+		PfGW456L13_2738	0.57	-2.2
3,036,801	+		PfGW456L13_2738	0.57	+0.9
3,036,801	+		PfGW456L13_2738	0.57	+0.7
3,036,802	-		PfGW456L13_2738	0.57	+0.7
3,036,802	-		PfGW456L13_2738	0.57	+0.7
3,036,802	-		PfGW456L13_2738	0.57	-0.9
3,036,802	-		PfGW456L13_2738	0.57	-2.0
3,036,802	-		PfGW456L13_2738	0.57	+0.8
3,036,802	-		PfGW456L13_2738	0.57	-0.0
3,036,818	-		PfGW456L13_2738	0.59	-1.5
3,036,970	+		PfGW456L13_2738	0.74	+0.3
3,036,971	-		PfGW456L13_2738	0.74	+1.2
3,037,060	+		PfGW456L13_2738	0.82	-0.7
3,037,060	+		PfGW456L13_2738	0.82	+0.6
3,037,061	-		PfGW456L13_2738	0.82	-1.5
3,037,072	+		PfGW456L13_2738	0.84	-0.7
3,037,072	+		PfGW456L13_2738	0.84	+0.8
3,037,072	+		PfGW456L13_2738	0.84	-1.0
3,037,072	+		PfGW456L13_2738	0.84	+0.0
3,037,232	+				-0.3
3,037,232	+				+0.5
3,037,233	-				+0.5
3,037,233	-				+0.8
3,037,270	+				+0.9
3,037,271	-				-0.6
3,037,308	+				+1.3
3,037,308	+				-1.4
3,037,308	+				-1.1
3,037,308	+				-0.5
3,037,309	-		PfGW456L13_2739	0.10	+0.7
3,037,309	-		PfGW456L13_2739	0.10	+0.1
3,037,309	-		PfGW456L13_2739	0.10	+0.8
3,037,360	+		PfGW456L13_2739	0.20	+0.4
3,037,360	+		PfGW456L13_2739	0.20	-1.1
3,037,375	+		PfGW456L13_2739	0.24	+0.4
3,037,570	+		PfGW456L13_2739	0.63	+0.3
3,037,570	+		PfGW456L13_2739	0.63	-1.5
3,037,570	+		PfGW456L13_2739	0.63	-0.2
3,037,571	-		PfGW456L13_2739	0.64	+0.1
3,037,571	-		PfGW456L13_2739	0.64	-0.3
3,037,606	+		PfGW456L13_2739	0.71	-0.9
3,037,606	+		PfGW456L13_2739	0.71	-1.3
3,037,606	+		PfGW456L13_2739	0.71	-0.5
3,037,606	+		PfGW456L13_2739	0.71	-0.8
3,037,606	+		PfGW456L13_2739	0.71	+0.1
3,037,606	+		PfGW456L13_2739	0.71	+0.6
3,037,606	+		PfGW456L13_2739	0.71	+0.9
3,037,607	-		PfGW456L13_2739	0.71	-0.5
3,037,667	+		PfGW456L13_2739	0.83	-0.7
3,037,667	+		PfGW456L13_2739	0.83	+0.9
3,037,667	+		PfGW456L13_2739	0.83	-0.3
3,037,667	+		PfGW456L13_2739	0.83	+0.2
3,037,669	+		PfGW456L13_2739	0.84	-0.6
3,037,669	+		PfGW456L13_2739	0.84	+2.1
3,037,669	+		PfGW456L13_2739	0.84	-0.4
3,037,670	-		PfGW456L13_2739	0.84	+1.9
3,037,670	-		PfGW456L13_2739	0.84	+0.7
3,037,670	-		PfGW456L13_2739	0.84	+1.5
3,037,670	-		PfGW456L13_2739	0.84	-1.1
3,037,670	-		PfGW456L13_2739	0.84	-0.2
3,037,670	-		PfGW456L13_2739	0.84	-1.4
3,037,670	-		PfGW456L13_2739	0.84	-0.1
3,037,670	-		PfGW456L13_2739	0.84	-2.5
3,037,670	-		PfGW456L13_2739	0.84	-0.5
3,037,707	-				-0.4
3,037,732	+				-1.1
3,037,732	+				+0.9
3,037,733	-				+0.2
3,037,737	+				-2.0
3,037,737	+				-0.8
3,037,737	+				-1.6
3,037,737	+				-0.4
3,037,737	+				-2.7
3,037,737	+				+0.2
3,037,738	-				+0.9
3,037,738	-				-0.2
3,037,829	+				-0.6
3,037,829	+				+1.6
3,037,829	+				+0.9
3,037,830	-				-1.0
3,037,830	-				-0.4
3,037,830	-				-0.8
3,037,830	-				+0.1
3,037,864	+				+0.6
3,037,865	-				-0.0
3,038,140	-				-0.7
3,038,183	+		PfGW456L13_2740	0.31	+0.5
3,038,183	+		PfGW456L13_2740	0.31	+0.2
3,038,184	-		PfGW456L13_2740	0.31	-2.2
3,038,184	-		PfGW456L13_2740	0.31	-0.5
3,038,184	-		PfGW456L13_2740	0.31	+0.5
3,038,184	-				+0.1
3,038,184	-		PfGW456L13_2740	0.31	-0.2
3,038,237	+		PfGW456L13_2740	0.35	-1.4
3,038,237	+		PfGW456L13_2740	0.35	+0.4
3,038,238	-		PfGW456L13_2740	0.35	-0.6
3,038,292	+		PfGW456L13_2740	0.39	-1.4
3,038,292	+		PfGW456L13_2740	0.39	+0.4
3,038,438	-		PfGW456L13_2740	0.50	+0.4
3,038,438	-		PfGW456L13_2740	0.50	+0.8
3,038,450	+		PfGW456L13_2740	0.51	+0.2
3,038,450	+		PfGW456L13_2740	0.51	+0.7
3,038,450	+		PfGW456L13_2740	0.51	-1.5
3,038,450	+		PfGW456L13_2740	0.51	+0.7
3,038,450	+		PfGW456L13_2740	0.51	+0.4
3,038,451	-		PfGW456L13_2740	0.51	-0.2
3,038,451	-		PfGW456L13_2740	0.51	+0.6
3,038,451	-		PfGW456L13_2740	0.51	+0.7
3,038,451	-		PfGW456L13_2740	0.51	+0.1
3,038,451	-		PfGW456L13_2740	0.51	+0.6
3,038,451	-		PfGW456L13_2740	0.51	-2.9
3,038,451	-		PfGW456L13_2740	0.51	+1.4
3,038,451	-		PfGW456L13_2740	0.51	+0.7
3,038,456	+		PfGW456L13_2740	0.51	+1.3
3,038,456	+		PfGW456L13_2740	0.51	+1.8
3,038,456	+		PfGW456L13_2740	0.51	+0.5
3,038,456	+				+0.9
3,038,457	-		PfGW456L13_2740	0.51	+1.8
3,038,514	+		PfGW456L13_2740	0.55	+0.5
3,038,514	+		PfGW456L13_2740	0.55	+0.1
3,038,515	-		PfGW456L13_2740	0.55	+0.9
3,038,522	+		PfGW456L13_2740	0.56	-1.4
3,038,522	+		PfGW456L13_2740	0.56	+1.5
3,038,523	-		PfGW456L13_2740	0.56	+0.0
3,038,523	-		PfGW456L13_2740	0.56	-0.1
3,038,528	+		PfGW456L13_2740	0.56	-0.3
3,038,528	+		PfGW456L13_2740	0.56	+0.5
3,038,528	+		PfGW456L13_2740	0.56	-2.2
3,038,528	+		PfGW456L13_2740	0.56	-1.9
3,038,529	-		PfGW456L13_2740	0.56	+0.4
3,038,529	-		PfGW456L13_2740	0.56	+0.1
3,038,615	+		PfGW456L13_2740	0.62	-0.1
3,038,616	-		PfGW456L13_2740	0.62	-1.0
3,038,616	-		PfGW456L13_2740	0.62	+0.4
3,038,672	+		PfGW456L13_2740	0.67	+1.6
3,038,672	+		PfGW456L13_2740	0.67	-0.5
3,038,672	+		PfGW456L13_2740	0.67	-1.7
3,038,672	+		PfGW456L13_2740	0.67	+1.1
3,038,673	-		PfGW456L13_2740	0.67	+0.6
3,038,775	-		PfGW456L13_2740	0.74	-1.6
3,038,975	+		PfGW456L13_2740	0.88	+0.1
3,038,975	+		PfGW456L13_2740	0.88	-0.2
3,038,976	-		PfGW456L13_2740	0.88	+0.5
3,038,976	-		PfGW456L13_2740	0.88	+0.5
3,038,976	-		PfGW456L13_2740	0.88	-0.8
3,039,060	+				+1.2
3,039,060	+				-0.0
3,039,060	+				+0.6
3,039,061	-				-1.6
3,039,061	-				+2.0
3,039,098	+				-0.1
3,039,098	+				+0.4
3,039,098	+				+0.1
3,039,098	+				-1.0
3,039,098	+				+0.3
3,039,098	+				-0.1
3,039,098	+				+1.3
3,039,098	+				-0.8
3,039,098	+				-0.1
3,039,099	-				+0.6
3,039,099	-				+0.5
3,039,099	-				-0.5
3,039,099	-				-0.4
3,039,123	+				+0.3
3,039,123	+				+0.5
3,039,140	+		PfGW456L13_2741	0.24	+0.9
3,039,140	+		PfGW456L13_2741	0.24	+1.1
3,039,153	-		PfGW456L13_2741	0.30	+0.9
3,039,153	-		PfGW456L13_2741	0.30	-0.3
3,039,159	-		PfGW456L13_2741	0.33	+1.1
3,039,159	-		PfGW456L13_2741	0.33	-0.4
3,039,198	+		PfGW456L13_2741	0.52	+1.5
3,039,199	-		PfGW456L13_2741	0.53	-0.7
3,039,216	+		PfGW456L13_2741	0.61	+0.2
3,039,216	+		PfGW456L13_2741	0.61	-0.9
3,039,220	+		PfGW456L13_2741	0.63	+0.4
3,039,220	+		PfGW456L13_2741	0.63	-0.1
3,039,221	-		PfGW456L13_2741	0.64	-1.1
3,039,221	-		PfGW456L13_2741	0.64	+0.9
3,039,221	-		PfGW456L13_2741	0.64	+0.9
3,039,299	+				+0.8
3,039,299	+				-0.3
3,039,300	-				-1.2
3,039,300	-				+0.1
3,039,300	-				+0.4
3,039,307	+				+0.5
3,039,308	-				-1.0
3,039,338	+				-0.1
3,039,339	-				-0.7
3,039,339	-				-0.1
3,039,578	-		PfGW456L13_2742	0.20	-0.4
3,039,621	+		PfGW456L13_2742	0.24	-0.3
3,039,621	+		PfGW456L13_2742	0.24	-2.3
3,039,622	-		PfGW456L13_2742	0.24	-0.2
3,039,622	-		PfGW456L13_2742	0.24	+0.9
3,039,625	+		PfGW456L13_2742	0.25	+0.5
3,039,625	+		PfGW456L13_2742	0.25	-1.3
3,039,625	+		PfGW456L13_2742	0.25	+1.0
3,039,626	-		PfGW456L13_2742	0.25	-0.1
3,039,626	-		PfGW456L13_2742	0.25	+1.7
3,039,626	-		PfGW456L13_2742	0.25	+0.4
3,039,626	-		PfGW456L13_2742	0.25	-0.2
3,039,626	-		PfGW456L13_2742	0.25	+1.1
3,039,628	-		PfGW456L13_2742	0.25	+1.0
3,039,628	-		PfGW456L13_2742	0.25	+1.9
3,039,628	-		PfGW456L13_2742	0.25	-0.2
3,039,741	+		PfGW456L13_2742	0.36	+0.2
3,039,750	+		PfGW456L13_2742	0.37	-0.7
3,039,858	-		PfGW456L13_2742	0.48	-0.9
3,039,904	+		PfGW456L13_2742	0.52	+0.9
3,039,905	-		PfGW456L13_2742	0.52	-0.1
3,039,905	-		PfGW456L13_2742	0.52	+0.1
3,039,905	-		PfGW456L13_2742	0.52	+0.0
3,039,996	-		PfGW456L13_2742	0.62	-0.2
3,040,061	-		PfGW456L13_2742	0.68	-1.8
3,040,064	+		PfGW456L13_2742	0.68	+1.4