Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2691

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
2,990,651	-		PfGW456L13_2690	0.55	+0.9
2,990,739	+		PfGW456L13_2690	0.61	+1.0
2,990,740	-		PfGW456L13_2690	0.61	-1.1
2,990,762	+		PfGW456L13_2690	0.62	+1.2
2,990,762	+		PfGW456L13_2690	0.62	+0.9
2,990,762	+		PfGW456L13_2690	0.62	-1.7
2,990,762	+		PfGW456L13_2690	0.62	-0.8
2,990,763	-		PfGW456L13_2690	0.62	-0.3
2,990,763	-		PfGW456L13_2690	0.62	-1.2
2,990,763	-		PfGW456L13_2690	0.62	+0.4
2,990,763	-		PfGW456L13_2690	0.62	+0.9
2,990,764	+		PfGW456L13_2690	0.63	-2.1
2,990,764	+		PfGW456L13_2690	0.63	-0.4
2,990,764	+		PfGW456L13_2690	0.63	+0.3
2,990,764	+		PfGW456L13_2690	0.63	+1.4
2,990,770	+		PfGW456L13_2690	0.63	+0.9
2,990,770	+		PfGW456L13_2690	0.63	+0.3
2,990,771	-		PfGW456L13_2690	0.63	-0.1
2,990,810	+		PfGW456L13_2690	0.66	+0.3
2,990,810	+		PfGW456L13_2690	0.66	-0.3
2,990,810	+		PfGW456L13_2690	0.66	+0.1
2,990,811	-		PfGW456L13_2690	0.66	+0.3
2,990,811	-		PfGW456L13_2690	0.66	+0.7
2,990,811	-		PfGW456L13_2690	0.66	-1.8
2,990,811	-		PfGW456L13_2690	0.66	-0.1
2,990,811	-		PfGW456L13_2690	0.66	+0.5
2,990,903	+		PfGW456L13_2690	0.72	-0.4
2,990,904	-		PfGW456L13_2690	0.72	-0.4
2,990,904	-		PfGW456L13_2690	0.72	-0.1
2,990,942	+		PfGW456L13_2690	0.74	-1.2
2,990,943	-		PfGW456L13_2690	0.74	-0.8
2,990,943	-		PfGW456L13_2690	0.74	-0.9
2,991,132	-		PfGW456L13_2690	0.87	-0.1
2,991,132	-		PfGW456L13_2690	0.87	-3.1
2,991,132	-		PfGW456L13_2690	0.87	+1.3
2,991,239	+				+1.0
2,991,239	+				+0.3
2,991,240	-				+0.4
2,991,288	-				-3.1
2,991,467	+				+0.7
2,991,468	-				-0.7
2,991,577	-				+0.9
2,991,577	-				+0.5
2,991,600	+				+0.4
2,991,600	+				+1.7
2,991,600	+				+0.6
2,991,600	+				+0.0
2,991,601	-				-0.5
2,991,601	-				+1.3
2,991,601	-				+1.8
2,991,601	-				+0.5
2,992,033	+		PfGW456L13_2691	0.27	+0.1
2,992,033	+		PfGW456L13_2691	0.27	+0.9
2,992,033	+		PfGW456L13_2691	0.27	+0.1
2,992,033	+		PfGW456L13_2691	0.27	+0.4
2,992,033	+		PfGW456L13_2691	0.27	+0.2
2,992,033	+		PfGW456L13_2691	0.27	-1.1
2,992,033	+		PfGW456L13_2691	0.27	-0.1
2,992,158	+		PfGW456L13_2691	0.35	-0.3
2,992,158	+		PfGW456L13_2691	0.35	+0.4
2,992,159	-		PfGW456L13_2691	0.35	+0.1
2,992,299	+		PfGW456L13_2691	0.44	+0.3
2,992,299	+		PfGW456L13_2691	0.44	-2.6
2,992,299	+		PfGW456L13_2691	0.44	-0.1
2,992,300	-		PfGW456L13_2691	0.44	-0.3
2,992,300	-		PfGW456L13_2691	0.44	+0.9
2,992,300	-		PfGW456L13_2691	0.44	+0.9
2,992,320	+		PfGW456L13_2691	0.45	+0.7
2,992,320	+		PfGW456L13_2691	0.45	+0.1
2,992,320	+		PfGW456L13_2691	0.45	-0.4
2,992,320	+		PfGW456L13_2691	0.45	+1.6
2,992,321	-		PfGW456L13_2691	0.45	+0.4
2,992,321	-		PfGW456L13_2691	0.45	-0.2
2,992,321	-		PfGW456L13_2691	0.45	-1.1
2,992,321	-		PfGW456L13_2691	0.45	+1.5
2,992,321	-		PfGW456L13_2691	0.45	-1.8
2,992,321	-		PfGW456L13_2691	0.45	-0.3
2,992,321	-		PfGW456L13_2691	0.45	+1.3
2,992,332	+		PfGW456L13_2691	0.46	+0.8
2,992,333	-		PfGW456L13_2691	0.46	-2.3
2,992,341	+		PfGW456L13_2691	0.46	-0.2
2,992,356	-		PfGW456L13_2691	0.47	-0.2
2,992,572	+		PfGW456L13_2691	0.61	+0.2
2,992,572	+		PfGW456L13_2691	0.61	+0.2
2,992,572	+		PfGW456L13_2691	0.61	+0.2
2,992,572	+		PfGW456L13_2691	0.61	+0.4
2,992,573	-		PfGW456L13_2691	0.61	+0.2
2,992,573	-		PfGW456L13_2691	0.61	+1.1
2,992,573	-		PfGW456L13_2691	0.61	-2.2
2,992,573	-		PfGW456L13_2691	0.61	+0.8
2,992,734	+		PfGW456L13_2691	0.71	+0.2
2,992,734	+		PfGW456L13_2691	0.71	-0.1
2,992,734	+		PfGW456L13_2691	0.71	+0.1
2,992,734	+				+0.9
2,992,735	-		PfGW456L13_2691	0.71	+1.7
2,992,752	+		PfGW456L13_2691	0.72	-0.6
2,992,752	+		PfGW456L13_2691	0.72	+1.2
2,992,752	+		PfGW456L13_2691	0.72	+1.2
2,992,753	-		PfGW456L13_2691	0.72	+0.5
2,992,753	-		PfGW456L13_2691	0.72	-0.2
2,992,792	-		PfGW456L13_2691	0.75	-0.8
2,992,792	-		PfGW456L13_2691	0.75	-0.6
2,992,792	-		PfGW456L13_2691	0.75	-0.6
2,992,854	+		PfGW456L13_2691	0.79	+0.6
2,992,855	-		PfGW456L13_2691	0.79	+0.3
2,992,887	+		PfGW456L13_2691	0.81	+0.1
2,992,887	+		PfGW456L13_2691	0.81	-1.0
2,992,887	+		PfGW456L13_2691	0.81	-0.2
2,992,901	+		PfGW456L13_2691	0.82	-0.1
2,992,902	-		PfGW456L13_2691	0.82	+0.8
2,992,923	+		PfGW456L13_2691	0.83	+1.1
2,992,924	-		PfGW456L13_2691	0.83	-1.6
2,992,924	-		PfGW456L13_2691	0.83	-0.6
2,992,956	+		PfGW456L13_2691	0.85	-1.1
2,992,956	+		PfGW456L13_2691	0.85	-0.6
2,992,956	+		PfGW456L13_2691	0.85	+0.5
2,992,956	+		PfGW456L13_2691	0.85	+0.6
2,992,956	+		PfGW456L13_2691	0.85	-0.2
2,992,957	-		PfGW456L13_2691	0.85	-1.1
2,992,957	-		PfGW456L13_2691	0.85	+0.7
2,992,957	-		PfGW456L13_2691	0.85	-0.5
2,992,957	-		PfGW456L13_2691	0.85	+0.2
2,992,957	-		PfGW456L13_2691	0.85	+0.7
2,992,957	-		PfGW456L13_2691	0.85	-1.6
2,992,957	-				+2.5
2,993,034	+				-1.0
2,993,034	+				+1.8
2,993,034	+				-2.1
2,993,035	-				-0.7
2,993,035	-				+0.3
2,993,035	-				-0.0
2,993,038	-				-0.6
2,993,112	+				-1.1
2,993,112	+				+1.2
2,993,113	-				-0.2
2,993,150	+				+0.1
2,993,151	-				-0.3
2,993,151	-				-0.4
2,993,151	-				-0.5
2,993,151	-				+0.8
2,993,184	+				-0.4
2,993,185	-				-2.1
2,993,225	+				+1.1
2,993,225	+				-0.3
2,993,225	+				+0.6
2,993,225	+				+0.0
2,993,225	+				+0.5
2,993,225	+				+1.5
2,993,225	+				+0.5
2,993,225	+				-0.6
2,993,225	+				+0.1
2,993,225	+				-2.6
2,993,225	+				+1.4
2,993,225	+				+0.3
2,993,225	+				-0.4
2,993,226	-				+1.1
2,993,226	-				-0.2
2,993,334	+				+0.7
2,993,334	+				+0.4
2,993,334	+				-1.2
2,993,335	-				-0.1
2,993,384	+		PfGW456L13_2692	0.11	+0.5
2,993,384	+		PfGW456L13_2692	0.11	-0.3
2,993,384	+		PfGW456L13_2692	0.11	-0.5
2,993,385	-		PfGW456L13_2692	0.12	+0.6
2,993,385	-		PfGW456L13_2692	0.12	+0.0
2,993,385	-		PfGW456L13_2692	0.12	-0.2
2,993,492	+		PfGW456L13_2692	0.18	+0.5
2,993,492	+		PfGW456L13_2692	0.18	+0.1
2,993,492	+		PfGW456L13_2692	0.18	+0.6
2,993,492	+		PfGW456L13_2692	0.18	-0.1
2,993,492	+		PfGW456L13_2692	0.18	-0.4
2,993,493	-		PfGW456L13_2692	0.18	+0.5
2,993,493	-		PfGW456L13_2692	0.18	-0.1
2,993,493	-		PfGW456L13_2692	0.18	+0.5
2,993,573	+		PfGW456L13_2692	0.23	+0.1
2,993,594	+		PfGW456L13_2692	0.24	+0.2
2,993,611	+		PfGW456L13_2692	0.25	+0.2
2,993,611	+		PfGW456L13_2692	0.25	+0.4
2,993,611	+		PfGW456L13_2692	0.25	+2.4
2,993,611	+		PfGW456L13_2692	0.25	-0.9
2,993,612	-		PfGW456L13_2692	0.25	-2.0
2,993,612	-		PfGW456L13_2692	0.25	+0.5
2,993,612	-		PfGW456L13_2692	0.25	-1.4
2,993,615	+		PfGW456L13_2692	0.25	-1.9
2,993,616	-		PfGW456L13_2692	0.25	-0.2
2,993,616	-		PfGW456L13_2692	0.25	-0.6
2,993,659	+		PfGW456L13_2692	0.28	+0.4
2,993,659	+		PfGW456L13_2692	0.28	+0.2
2,993,675	+		PfGW456L13_2692	0.29	+0.3
2,993,676	-		PfGW456L13_2692	0.29	-0.2
2,993,711	+		PfGW456L13_2692	0.31	-0.5
2,993,711	+		PfGW456L13_2692	0.31	+0.5
2,993,712	-		PfGW456L13_2692	0.31	+0.5
2,993,712	-		PfGW456L13_2692	0.31	+1.0
2,993,738	+		PfGW456L13_2692	0.32	+0.1
2,993,738	+		PfGW456L13_2692	0.32	+1.1
2,993,739	-		PfGW456L13_2692	0.32	-2.1
2,993,810	+		PfGW456L13_2692	0.36	+0.7
2,993,810	+		PfGW456L13_2692	0.36	-3.3
2,993,810	+		PfGW456L13_2692	0.36	+0.4
2,993,811	-		PfGW456L13_2692	0.37	+0.5
2,993,909	+		PfGW456L13_2692	0.42	-0.1
2,993,909	+		PfGW456L13_2692	0.42	+0.7
2,993,909	+		PfGW456L13_2692	0.42	+0.3
2,993,909	+		PfGW456L13_2692	0.42	+0.0
2,993,909	+		PfGW456L13_2692	0.42	+0.2
2,993,909	+		PfGW456L13_2692	0.42	-0.9
2,993,909	+		PfGW456L13_2692	0.42	-0.0
2,993,910	-		PfGW456L13_2692	0.42	+0.7
2,993,910	-		PfGW456L13_2692	0.42	+2.3
2,993,910	-		PfGW456L13_2692	0.42	+0.9
2,993,910	-		PfGW456L13_2692	0.42	-0.1
2,993,910	-		PfGW456L13_2692	0.42	+0.6
2,993,910	-		PfGW456L13_2692	0.42	-0.5
2,993,939	+		PfGW456L13_2692	0.44	-0.2
2,993,939	+		PfGW456L13_2692	0.44	-0.6
2,993,939	+		PfGW456L13_2692	0.44	-0.1
2,993,940	-		PfGW456L13_2692	0.44	+1.9
2,993,940	-		PfGW456L13_2692	0.44	-1.1
2,994,101	+		PfGW456L13_2692	0.54	-0.1
2,994,101	+		PfGW456L13_2692	0.54	-0.7
2,994,101	+		PfGW456L13_2692	0.54	-0.2
2,994,101	+		PfGW456L13_2692	0.54	+0.7
2,994,101	+		PfGW456L13_2692	0.54	+0.9
2,994,102	-		PfGW456L13_2692	0.54	-0.2
2,994,102	-		PfGW456L13_2692	0.54	+1.9
2,994,102	-		PfGW456L13_2692	0.54	+1.1
2,994,102	-		PfGW456L13_2692	0.54	+0.4
2,994,102	-		PfGW456L13_2692	0.54	+0.6
2,994,102	-		PfGW456L13_2692	0.54	+0.8