Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1821

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
2,006,478	+		PfGW456L13_1820	0.49	-1.8
2,006,479	-		PfGW456L13_1820	0.49	+1.0
2,006,479	-		PfGW456L13_1820	0.49	-0.4
2,006,566	+		PfGW456L13_1820	0.55	+1.1
2,006,567	-		PfGW456L13_1820	0.55	-0.2
2,006,567	-		PfGW456L13_1820	0.55	+0.7
2,006,585	+		PfGW456L13_1820	0.56	-0.9
2,006,585	+		PfGW456L13_1820	0.56	+1.0
2,006,586	-		PfGW456L13_1820	0.56	+0.4
2,006,586	-		PfGW456L13_1820	0.56	-0.6
2,006,586	-		PfGW456L13_1820	0.56	-0.4
2,006,609	+		PfGW456L13_1820	0.58	-0.2
2,006,609	+		PfGW456L13_1820	0.58	-0.3
2,006,609	+		PfGW456L13_1820	0.58	-0.2
2,006,609	+		PfGW456L13_1820	0.58	+1.3
2,006,610	-		PfGW456L13_1820	0.58	+0.3
2,006,610	-		PfGW456L13_1820	0.58	-2.3
2,006,610	-		PfGW456L13_1820	0.58	+0.5
2,006,610	-		PfGW456L13_1820	0.58	-0.5
2,006,610	-		PfGW456L13_1820	0.58	-1.1
2,006,610	-		PfGW456L13_1820	0.58	+0.3
2,006,610	-		PfGW456L13_1820	0.58	-0.9
2,006,610	-		PfGW456L13_1820	0.58	-0.2
2,006,610	-		PfGW456L13_1820	0.58	+0.2
2,006,610	-		PfGW456L13_1820	0.58	+0.4
2,006,610	-		PfGW456L13_1820	0.58	+2.1
2,006,642	+		PfGW456L13_1820	0.60	-0.4
2,006,642	+		PfGW456L13_1820	0.60	+0.8
2,006,642	+		PfGW456L13_1820	0.60	-2.0
2,006,642	+		PfGW456L13_1820	0.60	+0.3
2,006,642	+		PfGW456L13_1820	0.60	+1.6
2,006,643	-		PfGW456L13_1820	0.60	-1.6
2,006,643	-		PfGW456L13_1820	0.60	+0.1
2,006,643	-		PfGW456L13_1820	0.60	-0.7
2,006,643	-		PfGW456L13_1820	0.60	+0.3
2,006,652	+		PfGW456L13_1820	0.61	+0.1
2,006,653	-		PfGW456L13_1820	0.61	+1.2
2,006,653	-		PfGW456L13_1820	0.61	+0.4
2,006,653	-		PfGW456L13_1820	0.61	-1.9
2,006,653	-		PfGW456L13_1820	0.61	-1.1
2,006,747	+		PfGW456L13_1820	0.67	+0.2
2,006,748	-		PfGW456L13_1820	0.67	-1.6
2,006,748	-		PfGW456L13_1820	0.67	-1.1
2,006,748	-		PfGW456L13_1820	0.67	-0.4
2,006,748	-		PfGW456L13_1820	0.67	-0.2
2,006,748	-		PfGW456L13_1820	0.67	+0.1
2,006,848	+		PfGW456L13_1820	0.73	+0.0
2,006,848	+		PfGW456L13_1820	0.73	-2.3
2,007,035	+		PfGW456L13_1820	0.85	+0.2
2,007,035	+		PfGW456L13_1820	0.85	+0.2
2,007,035	+		PfGW456L13_1820	0.85	+0.8
2,007,035	+		PfGW456L13_1820	0.85	+0.1
2,007,035	+		PfGW456L13_1820	0.85	-0.4
2,007,035	+		PfGW456L13_1820	0.85	-3.0
2,007,035	+		PfGW456L13_1820	0.85	-1.6
2,007,035	+		PfGW456L13_1820	0.85	+0.6
2,007,035	+		PfGW456L13_1820	0.85	+0.5
2,007,035	+		PfGW456L13_1820	0.85	-0.1
2,007,035	+		PfGW456L13_1820	0.85	-1.7
2,007,035	+		PfGW456L13_1820	0.85	+2.2
2,007,035	+		PfGW456L13_1820	0.85	-0.9
2,007,035	+		PfGW456L13_1820	0.85	+0.5
2,007,035	+		PfGW456L13_1820	0.85	-0.5
2,007,035	+		PfGW456L13_1820	0.85	+0.5
2,007,035	+		PfGW456L13_1820	0.85	-0.4
2,007,035	+		PfGW456L13_1820	0.85	-1.7
2,007,035	+		PfGW456L13_1820	0.85	+0.8
2,007,036	-		PfGW456L13_1820	0.85	-0.5
2,007,036	-		PfGW456L13_1820	0.85	-0.2
2,007,036	-		PfGW456L13_1820	0.85	-0.1
2,007,036	-		PfGW456L13_1820	0.85	-0.6
2,007,036	-		PfGW456L13_1820	0.85	-0.9
2,007,036	-		PfGW456L13_1820	0.85	+0.7
2,007,036	-		PfGW456L13_1820	0.85	-1.1
2,007,036	-		PfGW456L13_1820	0.85	+0.8
2,007,036	-		PfGW456L13_1820	0.85	+0.0
2,007,036	-		PfGW456L13_1820	0.85	+1.2
2,007,036	-		PfGW456L13_1820	0.85	-0.4
2,007,036	-		PfGW456L13_1820	0.85	+0.1
2,007,036	-				+0.2
2,007,288	+				+0.1
2,007,289	-				+1.2
2,007,289	-				-1.0
2,007,289	-				-0.3
2,007,327	+				+0.2
2,007,328	-				+0.6
2,007,367	-		PfGW456L13_1821	0.12	-0.6
2,007,376	+		PfGW456L13_1821	0.13	-0.5
2,007,591	+		PfGW456L13_1821	0.35	-3.5
2,007,591	+		PfGW456L13_1821	0.35	-1.2
2,007,591	+		PfGW456L13_1821	0.35	-1.1
2,007,717	+		PfGW456L13_1821	0.48	-1.2
2,007,717	+		PfGW456L13_1821	0.48	+0.3
2,007,717	+		PfGW456L13_1821	0.48	-0.4
2,007,717	+		PfGW456L13_1821	0.48	+1.1
2,007,717	+		PfGW456L13_1821	0.48	+0.4
2,007,717	+		PfGW456L13_1821	0.48	+0.7
2,007,717	+		PfGW456L13_1821	0.48	-0.5
2,007,717	+		PfGW456L13_1821	0.48	-0.0
2,007,717	+		PfGW456L13_1821	0.48	-0.4
2,007,717	+		PfGW456L13_1821	0.48	-1.2
2,007,717	+		PfGW456L13_1821	0.48	-0.0
2,007,718	-		PfGW456L13_1821	0.48	+1.9
2,007,718	-		PfGW456L13_1821	0.48	-1.0
2,007,718	-		PfGW456L13_1821	0.48	-1.1
2,007,718	-		PfGW456L13_1821	0.48	-0.9
2,007,718	-		PfGW456L13_1821	0.48	+1.6
2,007,718	-		PfGW456L13_1821	0.48	+0.3
2,007,721	-		PfGW456L13_1821	0.48	-0.8
2,007,792	+		PfGW456L13_1821	0.56	-0.5
2,007,792	+		PfGW456L13_1821	0.56	-1.0
2,007,792	+		PfGW456L13_1821	0.56	+0.6
2,007,792	+		PfGW456L13_1821	0.56	+0.0
2,007,792	+		PfGW456L13_1821	0.56	+1.5
2,007,792	+		PfGW456L13_1821	0.56	-0.7
2,007,792	+		PfGW456L13_1821	0.56	+0.2
2,007,792	+		PfGW456L13_1821	0.56	+0.1
2,007,792	+		PfGW456L13_1821	0.56	-1.7
2,007,792	+		PfGW456L13_1821	0.56	+0.4
2,007,792	+		PfGW456L13_1821	0.56	-0.6
2,007,793	-		PfGW456L13_1821	0.56	-2.0
2,007,793	-		PfGW456L13_1821	0.56	+0.2
2,007,793	-		PfGW456L13_1821	0.56	+0.0
2,007,793	-		PfGW456L13_1821	0.56	+0.5
2,007,793	-		PfGW456L13_1821	0.56	+0.2
2,007,793	-		PfGW456L13_1821	0.56	+0.6
2,007,793	-		PfGW456L13_1821	0.56	-0.2
2,007,793	-		PfGW456L13_1821	0.56	-0.3
2,007,793	-		PfGW456L13_1821	0.56	-1.0
2,007,793	-		PfGW456L13_1821	0.56	+0.9
2,007,837	+		PfGW456L13_1821	0.60	+1.2
2,007,837	+		PfGW456L13_1821	0.60	+0.3
2,007,837	+		PfGW456L13_1821	0.60	-0.7
2,007,858	+		PfGW456L13_1821	0.62	-1.0
2,007,858	+		PfGW456L13_1821	0.62	+0.6
2,007,858	+		PfGW456L13_1821	0.62	+0.1
2,007,859	-		PfGW456L13_1821	0.62	-0.0
2,007,859	-		PfGW456L13_1821	0.62	+0.1
2,007,859	-		PfGW456L13_1821	0.62	-0.4
2,007,859	-		PfGW456L13_1821	0.62	-0.7
2,007,859	-		PfGW456L13_1821	0.62	-0.5
2,008,461	-		PfGW456L13_1822	0.33	-0.8
2,008,542	-		PfGW456L13_1822	0.44	-0.3
2,008,694	+		PfGW456L13_1822	0.65	+0.2
2,008,694	+		PfGW456L13_1822	0.65	+0.5
2,008,694	+		PfGW456L13_1822	0.65	+0.0
2,008,694	+		PfGW456L13_1822	0.65	+0.3
2,008,694	+		PfGW456L13_1822	0.65	-1.0
2,008,695	-		PfGW456L13_1822	0.65	+0.6
2,008,695	-		PfGW456L13_1822	0.65	+0.3
2,008,695	-		PfGW456L13_1822	0.65	-0.6
2,008,695	-		PfGW456L13_1822	0.65	+1.2
2,008,795	+		PfGW456L13_1822	0.79	+0.9
2,008,970	+				-2.1
2,008,971	-				-2.3
2,008,984	+				+0.6
2,008,984	+				-1.1
2,008,985	-				+0.2
2,008,998	+				-0.2
2,008,998	+				-1.7
2,008,999	-				+0.4
2,008,999	-				+0.1
2,008,999	-				-0.5
2,009,006	+				-1.0
2,009,006	+				-0.6
2,009,038	+				+0.5
2,009,038	+				-0.1
2,009,038	+				-0.9
2,009,038	+				+2.5
2,009,038	+				+0.2
2,009,038	+				+1.2
2,009,038	+				+1.3
2,009,038	+				+0.4
2,009,038	+				-0.6
2,009,038	+				-0.2
2,009,038	+				-3.1
2,009,038	+				-0.5
2,009,038	+				+0.4
2,009,038	+				+0.3
2,009,038	+				+1.6
2,009,038	+				-0.4
2,009,038	+				+0.4
2,009,038	+				-0.3
2,009,038	+				+0.1
2,009,038	+				+0.9
2,009,038	+				-0.3
2,009,042	+				+0.3
2,009,042	+				-0.1
2,009,042	+				-0.0
2,009,042	+				+1.4
2,009,042	+				+0.5
2,009,042	+				-0.1
2,009,042	+				-0.4
2,009,042	+				-0.1
2,009,042	+				+0.4
2,009,042	+				+0.1
2,009,042	+				+0.1
2,009,042	+				+1.0
2,009,042	+				+1.9
2,009,042	+				-0.8
2,009,042	+				+1.0
2,009,042	+				+0.0
2,009,043	-				+1.0
2,009,043	-				-0.8
2,009,087	+				-0.3
2,009,088	-				+0.4
2,009,114	+				+0.1
2,009,166	+				-0.7
2,009,166	+				-1.6
2,009,172	+				-0.6