Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1431

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
1,579,024	+		PfGW456L13_1430	0.13	+1.0
1,579,024	+		PfGW456L13_1430	0.13	+0.0
1,579,024	+		PfGW456L13_1430	0.13	+0.2
1,579,024	+		PfGW456L13_1430	0.13	-1.8
1,579,024	+		PfGW456L13_1430	0.13	-0.9
1,579,024	+		PfGW456L13_1430	0.13	-0.2
1,579,024	+		PfGW456L13_1430	0.13	-0.9
1,579,024	+		PfGW456L13_1430	0.13	-1.0
1,579,025	-		PfGW456L13_1430	0.13	-0.6
1,579,025	-		PfGW456L13_1430	0.13	-1.1
1,579,025	-		PfGW456L13_1430	0.13	-0.1
1,579,114	+		PfGW456L13_1430	0.21	+0.5
1,579,211	+		PfGW456L13_1430	0.30	-0.7
1,579,211	+		PfGW456L13_1430	0.30	-1.0
1,579,211	+		PfGW456L13_1430	0.30	-0.4
1,579,212	-		PfGW456L13_1430	0.30	-2.4
1,579,212	-		PfGW456L13_1430	0.30	+0.3
1,579,215	+		PfGW456L13_1430	0.31	+1.0
1,579,215	+		PfGW456L13_1430	0.31	-1.8
1,579,215	+		PfGW456L13_1430	0.31	-1.1
1,579,334	-		PfGW456L13_1430	0.42	-0.7
1,579,334	-		PfGW456L13_1430	0.42	+0.2
1,579,334	-		PfGW456L13_1430	0.42	-2.3
1,579,334	-		PfGW456L13_1430	0.42	-0.3
1,579,375	+		PfGW456L13_1430	0.45	-0.8
1,579,375	+		PfGW456L13_1430	0.45	+0.2
1,579,375	+		PfGW456L13_1430	0.45	-0.3
1,579,375	+		PfGW456L13_1430	0.45	+1.7
1,579,376	-		PfGW456L13_1430	0.45	-0.8
1,579,376	-		PfGW456L13_1430	0.45	+0.7
1,579,486	+		PfGW456L13_1430	0.56	-1.6
1,579,486	+		PfGW456L13_1430	0.56	+0.7
1,579,486	+		PfGW456L13_1430	0.56	-0.3
1,579,486	+		PfGW456L13_1430	0.56	-0.6
1,579,487	-		PfGW456L13_1430	0.56	-0.0
1,579,487	-		PfGW456L13_1430	0.56	-0.6
1,579,487	-		PfGW456L13_1430	0.56	+0.7
1,579,601	-		PfGW456L13_1430	0.66	-0.5
1,579,601	-		PfGW456L13_1430	0.66	+0.9
1,579,698	+		PfGW456L13_1430	0.75	+0.1
1,579,699	-		PfGW456L13_1430	0.75	+0.1
1,579,792	+		PfGW456L13_1430	0.84	-0.5
1,579,942	+				+0.1
1,579,943	-				-0.8
1,579,943	-				+1.0
1,580,104	-		PfGW456L13_1431	0.11	+0.5
1,580,104	-		PfGW456L13_1431	0.11	-0.5
1,580,104	-		PfGW456L13_1431	0.11	-0.4
1,580,152	+		PfGW456L13_1431	0.15	-0.9
1,580,152	+		PfGW456L13_1431	0.15	-1.4
1,580,153	-		PfGW456L13_1431	0.15	-0.8
1,580,153	-		PfGW456L13_1431	0.15	+0.3
1,580,153	-		PfGW456L13_1431	0.15	-0.5
1,580,153	-		PfGW456L13_1431	0.15	+0.5
1,580,153	-		PfGW456L13_1431	0.15	-0.3
1,580,168	+		PfGW456L13_1431	0.16	-2.3
1,580,169	-		PfGW456L13_1431	0.16	+0.3
1,580,282	+		PfGW456L13_1431	0.25	-1.7
1,580,282	+		PfGW456L13_1431	0.25	-0.5
1,580,282	+		PfGW456L13_1431	0.25	+0.1
1,580,349	+		PfGW456L13_1431	0.30	-0.1
1,580,350	-		PfGW456L13_1431	0.30	-2.4
1,580,350	-		PfGW456L13_1431	0.30	+0.3
1,580,350	-		PfGW456L13_1431	0.30	-0.4
1,580,350	-		PfGW456L13_1431	0.30	+1.3
1,580,864	+		PfGW456L13_1431	0.70	+0.3
1,580,971	+		PfGW456L13_1431	0.78	-1.6
1,580,971	+		PfGW456L13_1431	0.78	-0.3
1,580,971	+		PfGW456L13_1431	0.78	+0.6
1,580,997	+		PfGW456L13_1431	0.80	+0.7
1,580,998	-		PfGW456L13_1431	0.80	+0.1
1,580,998	-		PfGW456L13_1431	0.80	-2.5
1,580,998	-		PfGW456L13_1431	0.80	-1.8
1,580,998	-		PfGW456L13_1431	0.80	+0.7
1,581,001	+		PfGW456L13_1431	0.80	-3.0
1,581,001	+		PfGW456L13_1431	0.80	+0.1
1,581,002	-		PfGW456L13_1431	0.80	+0.2
1,581,165	+				-1.1
1,581,165	+				-0.5
1,581,166	-				-0.4
1,581,166	-				-0.5
1,581,166	-				-0.3
1,581,166	-				-0.7
1,581,292	+				-1.5
1,581,293	-				-1.1
1,581,293	-				-0.8
1,581,293	-				-1.8
1,581,339	+				+0.5
1,581,340	-				+0.9
1,581,368	+				+0.9
1,581,369	-				-0.1
1,581,369	-				+1.2
1,581,369	-				+0.7
1,581,374	+				-0.1
1,581,374	+				-0.4
1,581,374	+				+0.7
1,581,374	+				+0.6
1,581,375	-				+1.2
1,581,375	-				+0.4
1,581,375	-				+0.5
1,581,375	-				+1.0
1,581,375	-				-1.4
1,581,375	-				+1.6
1,581,375	-				+0.8
1,581,385	+				-1.2
1,581,385	+				+1.5
1,581,386	-				-0.5
1,581,677	+		PfGW456L13_1432	0.44	-1.5
1,581,677	+		PfGW456L13_1432	0.44	+0.3
1,581,677	+		PfGW456L13_1432	0.44	-0.5
1,581,678	-		PfGW456L13_1432	0.45	-1.4
1,581,678	-		PfGW456L13_1432	0.45	-2.7
1,581,678	-		PfGW456L13_1432	0.45	+1.3
1,581,678	-		PfGW456L13_1432	0.45	-1.7
1,581,696	-		PfGW456L13_1432	0.49	-0.8
1,581,815	+		PfGW456L13_1432	0.75	+0.7
1,581,821	+		PfGW456L13_1432	0.77	+0.3
1,581,821	+		PfGW456L13_1432	0.77	+0.6
1,581,821	+		PfGW456L13_1432	0.77	-0.1
1,581,822	-		PfGW456L13_1432	0.77	+0.9
1,581,822	-		PfGW456L13_1432	0.77	+0.2
1,581,822	-		PfGW456L13_1432	0.77	+0.4
1,581,822	-		PfGW456L13_1432	0.77	+1.4
1,581,871	+		PfGW456L13_1432	0.88	+0.1
1,581,871	+		PfGW456L13_1432	0.88	+0.3
1,581,871	+		PfGW456L13_1432	0.88	-2.8
1,581,871	+		PfGW456L13_1432	0.88	+0.1
1,581,872	-		PfGW456L13_1432	0.88	+0.6
1,581,872	-		PfGW456L13_1432	0.88	-0.3
1,581,895	+				-0.7
1,581,896	-				+2.2
1,581,914	+				-0.3
1,581,914	+				-0.6
1,581,914	+				+0.3
1,581,914	+				-0.5
1,581,914	+				+1.3
1,581,914	+				-0.4
1,581,914	+				-0.3
1,581,914	+				-0.0
1,581,914	+				+0.4
1,581,914	+				-0.4
1,581,915	-				+0.6
1,581,915	-				+0.0
1,581,915	-				-1.0
1,581,915	-				+0.6
1,581,915	-				-0.6
1,581,915	-				+0.9
1,581,915	-				-1.7
1,581,915	-				+0.5
1,581,915	-				+0.6
1,581,915	-				-1.0
1,581,916	+				-0.0
1,581,917	-				+1.3
1,581,933	+				+0.1
1,581,959	+				+1.5
1,581,960	-				-0.6
1,581,988	-				+0.3
1,582,002	-				+0.4
1,582,002	-				+0.1
1,582,002	-				-0.6
1,582,063	+		PfGW456L13_1433	0.13	-2.5
1,582,063	+		PfGW456L13_1433	0.13	-0.8
1,582,064	-		PfGW456L13_1433	0.13	-0.1
1,582,064	-		PfGW456L13_1433	0.13	-0.1
1,582,081	+		PfGW456L13_1433	0.16	-0.7
1,582,081	+		PfGW456L13_1433	0.16	-0.0
1,582,082	-		PfGW456L13_1433	0.16	+0.8
1,582,100	+		PfGW456L13_1433	0.19	+1.3