Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21455

Experiment: m.b. Tetracycline 0.006 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21450 and CA264_21455 are separated by 65 nucleotidesCA264_21455 and CA264_21460 are separated by 74 nucleotides CA264_21450: CA264_21450 - hypothetical protein, at 156,223 to 157,485 _21450 CA264_21455: CA264_21455 - hypothetical protein, at 157,551 to 158,864 _21455 CA264_21460: CA264_21460 - hypothetical protein, at 158,939 to 160,138 _21460 Position (kb) 157 158 159Strain fitness (log2 ratio) -1 0 1 2at 156.611 kb on - strand, within CA264_21450at 156.613 kb on - strand, within CA264_21450at 156.613 kb on - strand, within CA264_21450at 156.644 kb on - strand, within CA264_21450at 156.700 kb on - strand, within CA264_21450at 156.710 kb on - strand, within CA264_21450at 156.732 kb on - strand, within CA264_21450at 156.745 kb on - strand, within CA264_21450at 157.623 kb on - strandat 157.648 kb on - strandat 157.725 kb on - strand, within CA264_21455at 157.876 kb on - strand, within CA264_21455at 157.876 kb on - strand, within CA264_21455at 157.940 kb on - strand, within CA264_21455at 157.947 kb on - strand, within CA264_21455at 158.027 kb on - strand, within CA264_21455at 158.029 kb on - strand, within CA264_21455at 158.151 kb on - strand, within CA264_21455at 158.348 kb on - strand, within CA264_21455at 158.362 kb on - strand, within CA264_21455at 158.362 kb on - strand, within CA264_21455at 159.039 kb on - strandat 159.039 kb on - strandat 159.041 kb on - strandat 159.041 kb on - strandat 159.050 kb on - strandat 159.227 kb on - strand, within CA264_21460at 159.233 kb on - strand, within CA264_21460at 159.239 kb on - strand, within CA264_21460

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml
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156,611 - CA264_21450 0.31 +1.6
156,613 - CA264_21450 0.31 +0.4
156,613 - CA264_21450 0.31 +1.3
156,644 - CA264_21450 0.33 -0.2
156,700 - CA264_21450 0.38 +0.2
156,710 - CA264_21450 0.39 -0.2
156,732 - CA264_21450 0.40 +0.0
156,745 - CA264_21450 0.41 -0.6
157,623 - -0.5
157,648 - -0.1
157,725 - CA264_21455 0.13 +1.9
157,876 - CA264_21455 0.25 +0.5
157,876 - CA264_21455 0.25 -0.1
157,940 - CA264_21455 0.30 +0.9
157,947 - CA264_21455 0.30 +0.4
158,027 - CA264_21455 0.36 +0.3
158,029 - CA264_21455 0.36 +0.4
158,151 - CA264_21455 0.46 +1.9
158,348 - CA264_21455 0.61 -0.2
158,362 - CA264_21455 0.62 +1.3
158,362 - CA264_21455 0.62 +0.7
159,039 - -0.6
159,039 - -0.5
159,041 - -0.2
159,041 - -0.9
159,050 - -0.1
159,227 - CA264_21460 0.24 -0.9
159,233 - CA264_21460 0.24 -0.8
159,239 - CA264_21460 0.25 +0.6

Or see this region's nucleotide sequence