Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20455 and CA264_20460 are separated by 280 nucleotides CA264_20460 and CA264_20465 are separated by 168 nucleotides
CA264_20455: CA264_20455 - LLM class flavin-dependent oxidoreductase, at 4,714,421 to 4,715,464
_20455
CA264_20460: CA264_20460 - hypothetical protein, at 4,715,745 to 4,716,116
_20460
CA264_20465: CA264_20465 - aspartate carbamoyltransferase, at 4,716,285 to 4,717,208
_20465
Position (kb) 4715
4716
4717 Strain fitness (log2 ratio) -1
0
1
2 at 4714.805 kb on + strand, within CA264_20455 at 4714.805 kb on + strand, within CA264_20455 at 4714.805 kb on + strand, within CA264_20455 at 4714.836 kb on + strand, within CA264_20455 at 4714.844 kb on + strand, within CA264_20455 at 4715.028 kb on + strand, within CA264_20455 at 4715.057 kb on - strand, within CA264_20455 at 4715.144 kb on + strand, within CA264_20455 at 4715.177 kb on - strand, within CA264_20455 at 4715.205 kb on + strand, within CA264_20455 at 4715.205 kb on + strand, within CA264_20455 at 4715.206 kb on - strand, within CA264_20455 at 4715.206 kb on - strand, within CA264_20455 at 4715.240 kb on + strand, within CA264_20455 at 4715.241 kb on - strand, within CA264_20455 at 4715.241 kb on - strand, within CA264_20455 at 4715.241 kb on - strand, within CA264_20455 at 4715.243 kb on - strand, within CA264_20455 at 4715.384 kb on + strand at 4715.384 kb on + strand at 4715.386 kb on + strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.477 kb on - strand at 4715.490 kb on + strand at 4715.515 kb on + strand at 4715.526 kb on + strand at 4715.527 kb on - strand at 4715.527 kb on - strand at 4715.529 kb on - strand at 4715.595 kb on + strand at 4715.595 kb on + strand at 4715.606 kb on - strand at 4715.606 kb on - strand at 4715.618 kb on + strand at 4715.619 kb on - strand at 4715.621 kb on + strand at 4715.622 kb on - strand at 4715.625 kb on + strand at 4715.649 kb on + strand at 4715.650 kb on - strand at 4715.771 kb on + strand at 4715.853 kb on + strand, within CA264_20460 at 4715.892 kb on - strand, within CA264_20460 at 4715.912 kb on + strand, within CA264_20460 at 4715.913 kb on - strand, within CA264_20460 at 4716.029 kb on + strand, within CA264_20460 at 4716.029 kb on + strand, within CA264_20460 at 4716.030 kb on - strand, within CA264_20460 at 4716.105 kb on - strand at 4716.139 kb on - strand at 4716.257 kb on + strand at 4716.307 kb on + strand at 4716.312 kb on + strand at 4716.408 kb on - strand, within CA264_20465 at 4716.410 kb on + strand, within CA264_20465
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 4,714,805 + CA264_20455 0.37 -0.2 4,714,805 + CA264_20455 0.37 +0.4 4,714,805 + CA264_20455 0.37 -0.3 4,714,836 + CA264_20455 0.40 -0.3 4,714,844 + CA264_20455 0.41 +2.1 4,715,028 + CA264_20455 0.58 -1.3 4,715,057 - CA264_20455 0.61 +0.1 4,715,144 + CA264_20455 0.69 +1.2 4,715,177 - CA264_20455 0.72 +0.3 4,715,205 + CA264_20455 0.75 +1.6 4,715,205 + CA264_20455 0.75 +0.1 4,715,206 - CA264_20455 0.75 +0.4 4,715,206 - CA264_20455 0.75 -0.6 4,715,240 + CA264_20455 0.78 +0.8 4,715,241 - CA264_20455 0.79 -0.0 4,715,241 - CA264_20455 0.79 -0.4 4,715,241 - CA264_20455 0.79 +0.1 4,715,243 - CA264_20455 0.79 -0.4 4,715,384 + -0.6 4,715,384 + +0.1 4,715,386 + +0.2 4,715,387 - +0.8 4,715,387 - -0.5 4,715,387 - -0.4 4,715,387 - -0.0 4,715,387 - -0.2 4,715,477 - +0.8 4,715,490 + -0.2 4,715,515 + -0.3 4,715,526 + +0.3 4,715,527 - -0.3 4,715,527 - +0.1 4,715,529 - +0.1 4,715,595 + -0.1 4,715,595 + +0.1 4,715,606 - -1.6 4,715,606 - +0.3 4,715,618 + +0.1 4,715,619 - -0.1 4,715,621 + +0.4 4,715,622 - +0.8 4,715,625 + +0.6 4,715,649 + -0.2 4,715,650 - +0.2 4,715,771 + -0.8 4,715,853 + CA264_20460 0.29 -0.4 4,715,892 - CA264_20460 0.40 +0.7 4,715,912 + CA264_20460 0.45 -0.0 4,715,913 - CA264_20460 0.45 +0.1 4,716,029 + CA264_20460 0.76 +1.2 4,716,029 + CA264_20460 0.76 +0.8 4,716,030 - CA264_20460 0.77 +2.4 4,716,105 - -0.9 4,716,139 - -0.8 4,716,257 + -0.9 4,716,307 + -0.8 4,716,312 + +1.8 4,716,408 - CA264_20465 0.13 +0.8 4,716,410 + CA264_20465 0.14 -0.4
Or see this region's nucleotide sequence