Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20115 and CA264_20120 are separated by 75 nucleotides CA264_20120 and CA264_20125 are separated by 447 nucleotides CA264_20125 and CA264_20130 are separated by 111 nucleotides
CA264_20115: CA264_20115 - phosphoribosylamine--glycine ligase, at 4,638,404 to 4,639,693
_20115
CA264_20120: CA264_20120 - hypothetical protein, at 4,639,769 to 4,640,182
_20120
CA264_20125: CA264_20125 - hypothetical protein, at 4,640,630 to 4,640,971
_20125
CA264_20130: CA264_20130 - hypothetical protein, at 4,641,083 to 4,641,619
_20130
Position (kb)
4640
4641 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4639.631 kb on - strand at 4639.692 kb on - strand at 4639.709 kb on - strand at 4639.770 kb on + strand at 4639.770 kb on + strand at 4639.776 kb on + strand at 4639.962 kb on - strand, within CA264_20120 at 4640.070 kb on - strand, within CA264_20120 at 4640.088 kb on - strand, within CA264_20120 at 4640.141 kb on - strand at 4640.167 kb on + strand at 4640.170 kb on - strand at 4640.178 kb on + strand at 4640.300 kb on + strand at 4640.300 kb on + strand at 4640.349 kb on - strand at 4640.380 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.388 kb on + strand at 4640.388 kb on + strand at 4640.503 kb on + strand at 4640.504 kb on - strand at 4640.542 kb on + strand at 4640.543 kb on - strand at 4640.577 kb on + strand at 4640.578 kb on - strand at 4640.578 kb on - strand at 4640.578 kb on - strand at 4640.601 kb on - strand at 4640.616 kb on - strand at 4640.629 kb on + strand at 4640.649 kb on - strand at 4640.653 kb on + strand at 4640.653 kb on + strand at 4640.654 kb on - strand at 4640.682 kb on + strand, within CA264_20125 at 4640.693 kb on - strand, within CA264_20125 at 4640.856 kb on - strand, within CA264_20125 at 4640.884 kb on + strand, within CA264_20125 at 4640.884 kb on + strand, within CA264_20125 at 4640.885 kb on - strand, within CA264_20125 at 4640.888 kb on - strand, within CA264_20125 at 4640.969 kb on + strand at 4640.970 kb on - strand at 4640.986 kb on + strand at 4641.002 kb on + strand at 4641.002 kb on + strand at 4641.012 kb on + strand at 4641.013 kb on - strand at 4641.068 kb on - strand at 4641.138 kb on - strand, within CA264_20130 at 4641.174 kb on - strand, within CA264_20130 at 4641.182 kb on + strand, within CA264_20130 at 4641.256 kb on + strand, within CA264_20130 at 4641.269 kb on + strand, within CA264_20130 at 4641.269 kb on + strand, within CA264_20130 at 4641.280 kb on - strand, within CA264_20130 at 4641.323 kb on + strand, within CA264_20130 at 4641.324 kb on - strand, within CA264_20130 at 4641.324 kb on - strand, within CA264_20130 at 4641.325 kb on + strand, within CA264_20130 at 4641.325 kb on + strand, within CA264_20130 at 4641.329 kb on + strand, within CA264_20130 at 4641.380 kb on + strand, within CA264_20130 at 4641.396 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.527 kb on - strand, within CA264_20130 at 4641.537 kb on + strand, within CA264_20130 at 4641.693 kb on + strand at 4641.761 kb on + strand at 4641.762 kb on - strand at 4641.855 kb on + strand at 4641.856 kb on - strand at 4641.856 kb on - strand at 4641.859 kb on + strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.870 kb on - strand at 4641.884 kb on - strand at 4641.919 kb on - strand at 4641.946 kb on + strand at 4641.946 kb on + strand at 4641.947 kb on - strand at 4641.947 kb on - strand at 4641.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 4,639,631 - -0.1 4,639,692 - +0.3 4,639,709 - +0.1 4,639,770 + -0.3 4,639,770 + +0.7 4,639,776 + +0.2 4,639,962 - CA264_20120 0.47 -0.8 4,640,070 - CA264_20120 0.73 -1.3 4,640,088 - CA264_20120 0.77 +0.9 4,640,141 - +0.2 4,640,167 + +0.9 4,640,170 - -0.8 4,640,178 + +0.6 4,640,300 + -0.3 4,640,300 + -0.3 4,640,349 - -0.2 4,640,380 + -0.8 4,640,385 + -0.4 4,640,385 + -0.2 4,640,385 + +0.7 4,640,385 + +0.1 4,640,385 + +0.2 4,640,385 + +0.8 4,640,385 + +0.4 4,640,385 + -0.8 4,640,385 + +0.2 4,640,385 + +0.7 4,640,385 + +0.7 4,640,385 + -0.8 4,640,385 + -0.3 4,640,385 + +0.1 4,640,385 + +0.0 4,640,385 + +2.4 4,640,385 + +0.4 4,640,385 + +0.1 4,640,385 + +0.1 4,640,385 + +0.4 4,640,385 + +0.1 4,640,385 + +1.2 4,640,386 - +0.7 4,640,386 - +0.3 4,640,386 - +1.0 4,640,386 - +0.8 4,640,386 - +2.1 4,640,386 - -0.4 4,640,386 - +1.4 4,640,386 - -1.5 4,640,386 - +1.8 4,640,386 - -0.1 4,640,386 - +0.2 4,640,386 - -0.9 4,640,386 - +2.8 4,640,386 - +0.8 4,640,386 - -0.1 4,640,386 - +0.1 4,640,386 - +1.8 4,640,386 - -0.5 4,640,388 + -0.0 4,640,388 + -0.8 4,640,503 + +0.8 4,640,504 - +0.2 4,640,542 + -0.0 4,640,543 - +0.8 4,640,577 + +0.5 4,640,578 - +1.7 4,640,578 - +2.0 4,640,578 - +0.1 4,640,601 - +1.0 4,640,616 - +0.1 4,640,629 + +0.4 4,640,649 - +1.8 4,640,653 + +0.9 4,640,653 + +0.1 4,640,654 - +0.4 4,640,682 + CA264_20125 0.15 -0.8 4,640,693 - CA264_20125 0.18 +0.5 4,640,856 - CA264_20125 0.66 -0.1 4,640,884 + CA264_20125 0.74 +0.0 4,640,884 + CA264_20125 0.74 -0.2 4,640,885 - CA264_20125 0.75 -0.2 4,640,888 - CA264_20125 0.75 -0.5 4,640,969 + +0.2 4,640,970 - +0.4 4,640,986 + +0.8 4,641,002 + +0.3 4,641,002 + +1.8 4,641,012 + -0.5 4,641,013 - +1.0 4,641,068 - -0.8 4,641,138 - CA264_20130 0.10 -0.4 4,641,174 - CA264_20130 0.17 -0.9 4,641,182 + CA264_20130 0.18 +0.2 4,641,256 + CA264_20130 0.32 +0.1 4,641,269 + CA264_20130 0.35 -0.2 4,641,269 + CA264_20130 0.35 -1.2 4,641,280 - CA264_20130 0.37 -0.8 4,641,323 + CA264_20130 0.45 -0.3 4,641,324 - CA264_20130 0.45 +0.5 4,641,324 - CA264_20130 0.45 -0.1 4,641,325 + CA264_20130 0.45 +0.2 4,641,325 + CA264_20130 0.45 +1.3 4,641,329 + CA264_20130 0.46 -0.6 4,641,380 + CA264_20130 0.55 +1.7 4,641,396 + CA264_20130 0.58 +0.2 4,641,449 + CA264_20130 0.68 -0.2 4,641,449 + CA264_20130 0.68 +0.6 4,641,449 + CA264_20130 0.68 -0.3 4,641,450 - CA264_20130 0.68 -0.5 4,641,450 - CA264_20130 0.68 -0.3 4,641,450 - CA264_20130 0.68 +1.0 4,641,527 - CA264_20130 0.83 -0.4 4,641,537 + CA264_20130 0.85 -0.6 4,641,693 + -1.5 4,641,761 + -0.3 4,641,762 - -0.2 4,641,855 + +0.0 4,641,856 - +0.7 4,641,856 - -0.5 4,641,859 + -0.1 4,641,860 - +0.6 4,641,860 - +0.1 4,641,860 - +1.0 4,641,860 - -0.1 4,641,870 - -1.2 4,641,884 - -0.4 4,641,919 - -0.0 4,641,946 + -1.2 4,641,946 + -0.3 4,641,947 - -1.3 4,641,947 - +0.9 4,641,947 - -0.3
Or see this region's nucleotide sequence