Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16500 and CA264_16505 are separated by 6 nucleotides CA264_16505 and CA264_16510 are separated by 86 nucleotides CA264_16510 and CA264_16515 are separated by 73 nucleotides
CA264_16500: CA264_16500 - hypothetical protein, at 3,835,122 to 3,835,559
_16500
CA264_16505: CA264_16505 - methanol dehydrogenase, at 3,835,566 to 3,836,339
_16505
CA264_16510: CA264_16510 - hypothetical protein, at 3,836,426 to 3,836,623
_16510
CA264_16515: CA264_16515 - histidine kinase, at 3,836,697 to 3,839,345
_16515
Position (kb)
3836
3837 Strain fitness (log2 ratio)
-2
-1
0
1 at 3835.465 kb on + strand, within CA264_16500 at 3835.557 kb on + strand at 3835.557 kb on + strand at 3835.565 kb on + strand at 3835.566 kb on - strand at 3835.584 kb on - strand at 3835.669 kb on - strand, within CA264_16505 at 3835.842 kb on + strand, within CA264_16505 at 3835.843 kb on - strand, within CA264_16505 at 3835.920 kb on + strand, within CA264_16505 at 3835.920 kb on + strand, within CA264_16505 at 3835.920 kb on + strand, within CA264_16505 at 3835.921 kb on - strand, within CA264_16505 at 3835.921 kb on - strand, within CA264_16505 at 3835.921 kb on - strand, within CA264_16505 at 3835.924 kb on + strand, within CA264_16505 at 3835.924 kb on + strand, within CA264_16505 at 3835.963 kb on + strand, within CA264_16505 at 3836.019 kb on - strand, within CA264_16505 at 3836.216 kb on - strand, within CA264_16505 at 3836.356 kb on + strand at 3836.356 kb on + strand at 3836.357 kb on - strand at 3836.365 kb on - strand at 3836.413 kb on - strand at 3836.636 kb on + strand at 3836.637 kb on - strand at 3836.646 kb on - strand at 3836.693 kb on - strand at 3836.693 kb on - strand at 3836.693 kb on - strand at 3836.719 kb on + strand at 3836.720 kb on - strand at 3836.720 kb on - strand at 3836.787 kb on + strand at 3836.787 kb on + strand at 3836.788 kb on - strand at 3836.788 kb on - strand at 3836.798 kb on + strand at 3836.798 kb on + strand at 3836.798 kb on + strand at 3836.798 kb on + strand at 3836.873 kb on + strand at 3836.969 kb on + strand, within CA264_16515 at 3836.978 kb on - strand, within CA264_16515 at 3837.035 kb on + strand, within CA264_16515 at 3837.079 kb on - strand, within CA264_16515 at 3837.373 kb on + strand, within CA264_16515 at 3837.385 kb on + strand, within CA264_16515 at 3837.386 kb on - strand, within CA264_16515 at 3837.386 kb on - strand, within CA264_16515 at 3837.391 kb on + strand, within CA264_16515 at 3837.490 kb on + strand, within CA264_16515 at 3837.491 kb on - strand, within CA264_16515
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 3,835,465 + CA264_16500 0.78 -1.2 3,835,557 + -0.8 3,835,557 + -1.1 3,835,565 + -0.3 3,835,566 - +0.8 3,835,584 - -0.9 3,835,669 - CA264_16505 0.13 +0.8 3,835,842 + CA264_16505 0.36 -0.7 3,835,843 - CA264_16505 0.36 -0.8 3,835,920 + CA264_16505 0.46 +0.5 3,835,920 + CA264_16505 0.46 -0.0 3,835,920 + CA264_16505 0.46 +0.8 3,835,921 - CA264_16505 0.46 -2.6 3,835,921 - CA264_16505 0.46 +0.0 3,835,921 - CA264_16505 0.46 -2.2 3,835,924 + CA264_16505 0.46 -0.2 3,835,924 + CA264_16505 0.46 -0.3 3,835,963 + CA264_16505 0.51 +0.2 3,836,019 - CA264_16505 0.59 -1.0 3,836,216 - CA264_16505 0.84 +0.3 3,836,356 + -1.6 3,836,356 + +0.1 3,836,357 - -0.9 3,836,365 - -0.5 3,836,413 - -1.2 3,836,636 + +1.5 3,836,637 - -0.6 3,836,646 - -0.0 3,836,693 - +0.1 3,836,693 - -0.0 3,836,693 - -2.4 3,836,719 + +0.7 3,836,720 - -1.2 3,836,720 - +0.1 3,836,787 + -0.5 3,836,787 + -0.4 3,836,788 - -1.4 3,836,788 - -0.0 3,836,798 + +0.3 3,836,798 + -1.1 3,836,798 + -0.2 3,836,798 + -0.9 3,836,873 + -0.6 3,836,969 + CA264_16515 0.10 +0.8 3,836,978 - CA264_16515 0.11 -1.0 3,837,035 + CA264_16515 0.13 -1.2 3,837,079 - CA264_16515 0.14 +0.4 3,837,373 + CA264_16515 0.26 -0.4 3,837,385 + CA264_16515 0.26 +0.0 3,837,386 - CA264_16515 0.26 -0.2 3,837,386 - CA264_16515 0.26 -1.6 3,837,391 + CA264_16515 0.26 -0.2 3,837,490 + CA264_16515 0.30 -0.8 3,837,491 - CA264_16515 0.30 -1.0
Or see this region's nucleotide sequence