Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16100
Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Tetracycline 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,748,419 | + | +0.5 | |||
3,748,419 | + | -1.4 | |||
3,748,616 | + | -0.5 | |||
3,748,655 | - | -1.6 | |||
3,748,685 | + | -0.0 | |||
3,748,692 | - | +0.4 | |||
3,748,699 | + | -0.2 | |||
3,748,699 | + | +0.1 | |||
3,748,700 | - | +0.2 | |||
3,748,747 | - | -0.6 | |||
3,748,770 | + | +1.2 | |||
3,748,777 | - | +0.2 | |||
3,749,305 | - | CA264_16100 | 0.61 | +0.8 | |
3,749,378 | - | CA264_16100 | 0.80 | -1.8 | |
3,749,410 | + | CA264_16100 | 0.89 | -0.9 | |
3,749,496 | + | -0.7 | |||
3,749,496 | + | -0.2 | |||
3,749,496 | + | +1.4 | |||
3,749,500 | + | +0.5 | |||
3,749,501 | - | -0.1 | |||
3,749,503 | - | -0.9 | |||
3,749,586 | + | CA264_16105 | 0.12 | -0.1 | |
3,749,626 | + | CA264_16105 | 0.16 | -1.2 | |
3,749,627 | - | CA264_16105 | 0.16 | -2.7 | |
3,749,629 | + | CA264_16105 | 0.17 | -0.4 | |
3,749,671 | + | CA264_16105 | 0.21 | +1.8 | |
3,749,841 | - | CA264_16105 | 0.41 | -0.3 | |
3,750,276 | - | +1.0 | |||
3,750,312 | - | -0.2 | |||
3,750,315 | - | -0.2 | |||
3,750,315 | - | +0.3 | |||
3,750,321 | - | -0.2 | |||
3,750,321 | - | -0.1 | |||
3,750,347 | - | +0.2 | |||
3,750,389 | - | -1.6 | |||
3,750,397 | - | -0.1 |
Or see this region's nucleotide sequence