Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11405 and CA264_11410 are separated by 57 nucleotides CA264_11410 and CA264_11415 overlap by 8 nucleotides
CA264_11405: CA264_11405 - glycerophosphodiester phosphodiesterase, at 2,643,199 to 2,644,098
_11405
CA264_11410: CA264_11410 - histidine phosphatase family protein, at 2,644,156 to 2,644,755
_11410
CA264_11415: CA264_11415 - carbohydrate kinase, at 2,644,748 to 2,646,208
_11415
Position (kb)
2644
2645 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2643.236 kb on + strand at 2643.236 kb on + strand at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.354 kb on - strand, within CA264_11405 at 2643.354 kb on - strand, within CA264_11405 at 2643.407 kb on + strand, within CA264_11405 at 2643.407 kb on + strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.447 kb on - strand, within CA264_11405 at 2643.486 kb on - strand, within CA264_11405 at 2643.551 kb on + strand, within CA264_11405 at 2643.594 kb on - strand, within CA264_11405 at 2643.691 kb on + strand, within CA264_11405 at 2643.692 kb on - strand, within CA264_11405 at 2643.694 kb on + strand, within CA264_11405 at 2643.779 kb on + strand, within CA264_11405 at 2643.811 kb on - strand, within CA264_11405 at 2643.871 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.904 kb on - strand, within CA264_11405 at 2643.925 kb on - strand, within CA264_11405 at 2643.989 kb on + strand, within CA264_11405 at 2643.999 kb on - strand, within CA264_11405 at 2644.044 kb on + strand at 2644.058 kb on - strand at 2644.105 kb on + strand at 2644.132 kb on + strand at 2644.133 kb on - strand at 2644.209 kb on + strand at 2644.210 kb on - strand at 2644.286 kb on + strand, within CA264_11410 at 2644.287 kb on - strand, within CA264_11410 at 2644.321 kb on + strand, within CA264_11410 at 2644.327 kb on - strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.381 kb on - strand, within CA264_11410 at 2644.381 kb on - strand, within CA264_11410 at 2644.562 kb on + strand, within CA264_11410 at 2644.563 kb on - strand, within CA264_11410 at 2644.563 kb on - strand, within CA264_11410 at 2644.598 kb on + strand, within CA264_11410 at 2644.598 kb on + strand, within CA264_11410 at 2644.599 kb on - strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.694 kb on + strand, within CA264_11410 at 2644.695 kb on - strand, within CA264_11410 at 2644.695 kb on - strand, within CA264_11410 at 2644.739 kb on - strand at 2644.755 kb on + strand at 2644.762 kb on - strand at 2644.772 kb on + strand at 2644.772 kb on + strand at 2644.772 kb on + strand at 2644.773 kb on - strand at 2644.775 kb on - strand at 2644.775 kb on - strand at 2644.775 kb on - strand at 2644.776 kb on + strand at 2644.792 kb on + strand at 2644.866 kb on - strand at 2644.892 kb on + strand at 2644.903 kb on + strand, within CA264_11415 at 2644.903 kb on + strand, within CA264_11415 at 2644.903 kb on + strand, within CA264_11415 at 2644.904 kb on - strand, within CA264_11415 at 2644.904 kb on - strand, within CA264_11415 at 2644.905 kb on + strand, within CA264_11415 at 2644.905 kb on + strand, within CA264_11415 at 2644.925 kb on + strand, within CA264_11415 at 2644.926 kb on - strand, within CA264_11415 at 2645.041 kb on - strand, within CA264_11415 at 2645.066 kb on + strand, within CA264_11415 at 2645.104 kb on - strand, within CA264_11415 at 2645.108 kb on + strand, within CA264_11415 at 2645.108 kb on + strand, within CA264_11415 at 2645.122 kb on + strand, within CA264_11415 at 2645.169 kb on - strand, within CA264_11415 at 2645.185 kb on + strand, within CA264_11415 at 2645.185 kb on + strand, within CA264_11415 at 2645.228 kb on + strand, within CA264_11415 at 2645.237 kb on - strand, within CA264_11415 at 2645.298 kb on - strand, within CA264_11415 at 2645.365 kb on - strand, within CA264_11415 at 2645.384 kb on + strand, within CA264_11415 at 2645.385 kb on - strand, within CA264_11415 at 2645.557 kb on + strand, within CA264_11415 at 2645.557 kb on + strand, within CA264_11415 at 2645.558 kb on - strand, within CA264_11415 at 2645.558 kb on - strand, within CA264_11415 at 2645.661 kb on + strand, within CA264_11415 at 2645.693 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.711 kb on + strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.728 kb on - strand, within CA264_11415
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 2,643,236 + +0.3 2,643,236 + -0.2 2,643,353 + CA264_11405 0.17 +0.2 2,643,353 + CA264_11405 0.17 +0.8 2,643,353 + CA264_11405 0.17 -0.9 2,643,353 + CA264_11405 0.17 +1.6 2,643,353 + CA264_11405 0.17 -0.3 2,643,354 - CA264_11405 0.17 +0.3 2,643,354 - CA264_11405 0.17 +0.1 2,643,407 + CA264_11405 0.23 -1.1 2,643,407 + CA264_11405 0.23 -1.8 2,643,408 - CA264_11405 0.23 +1.3 2,643,408 - CA264_11405 0.23 -0.6 2,643,408 - CA264_11405 0.23 +0.1 2,643,408 - CA264_11405 0.23 +1.3 2,643,447 - CA264_11405 0.28 +1.3 2,643,486 - CA264_11405 0.32 -0.8 2,643,551 + CA264_11405 0.39 -0.5 2,643,594 - CA264_11405 0.44 -0.5 2,643,691 + CA264_11405 0.55 -0.2 2,643,692 - CA264_11405 0.55 -1.4 2,643,694 + CA264_11405 0.55 +0.1 2,643,779 + CA264_11405 0.64 -0.1 2,643,811 - CA264_11405 0.68 +0.0 2,643,871 + CA264_11405 0.75 -0.1 2,643,903 + CA264_11405 0.78 -0.1 2,643,903 + CA264_11405 0.78 -1.8 2,643,904 - CA264_11405 0.78 +0.3 2,643,925 - CA264_11405 0.81 +0.9 2,643,989 + CA264_11405 0.88 -0.6 2,643,999 - CA264_11405 0.89 +0.4 2,644,044 + +0.2 2,644,058 - -0.3 2,644,105 + +1.8 2,644,132 + +0.1 2,644,133 - -0.7 2,644,209 + +0.1 2,644,210 - -0.2 2,644,286 + CA264_11410 0.22 +0.6 2,644,287 - CA264_11410 0.22 -0.3 2,644,321 + CA264_11410 0.28 -0.3 2,644,327 - CA264_11410 0.28 -0.8 2,644,378 + CA264_11410 0.37 +0.2 2,644,378 + CA264_11410 0.37 -1.2 2,644,378 + CA264_11410 0.37 -0.1 2,644,381 - CA264_11410 0.38 +0.1 2,644,381 - CA264_11410 0.38 +1.3 2,644,562 + CA264_11410 0.68 -0.8 2,644,563 - CA264_11410 0.68 +1.2 2,644,563 - CA264_11410 0.68 -0.5 2,644,598 + CA264_11410 0.74 -1.2 2,644,598 + CA264_11410 0.74 +2.8 2,644,599 - CA264_11410 0.74 -0.4 2,644,600 + CA264_11410 0.74 -0.6 2,644,600 + CA264_11410 0.74 +0.1 2,644,600 + CA264_11410 0.74 -0.0 2,644,600 + CA264_11410 0.74 -1.0 2,644,601 - CA264_11410 0.74 -0.1 2,644,601 - CA264_11410 0.74 +0.6 2,644,601 - CA264_11410 0.74 +1.2 2,644,601 - CA264_11410 0.74 +1.0 2,644,694 + CA264_11410 0.90 -0.0 2,644,695 - CA264_11410 0.90 +0.2 2,644,695 - CA264_11410 0.90 +0.8 2,644,739 - -0.0 2,644,755 + +0.2 2,644,762 - +0.3 2,644,772 + -0.1 2,644,772 + +0.7 2,644,772 + +0.2 2,644,773 - +0.4 2,644,775 - -0.7 2,644,775 - -0.3 2,644,775 - -0.2 2,644,776 + -0.2 2,644,792 + +1.2 2,644,866 - +0.8 2,644,892 + -0.2 2,644,903 + CA264_11415 0.11 -0.2 2,644,903 + CA264_11415 0.11 -0.1 2,644,903 + CA264_11415 0.11 +0.1 2,644,904 - CA264_11415 0.11 +0.6 2,644,904 - CA264_11415 0.11 -0.1 2,644,905 + CA264_11415 0.11 -0.5 2,644,905 + CA264_11415 0.11 +0.2 2,644,925 + CA264_11415 0.12 -1.1 2,644,926 - CA264_11415 0.12 -0.2 2,645,041 - CA264_11415 0.20 +0.9 2,645,066 + CA264_11415 0.22 -0.6 2,645,104 - CA264_11415 0.24 +0.0 2,645,108 + CA264_11415 0.25 -0.2 2,645,108 + CA264_11415 0.25 -1.2 2,645,122 + CA264_11415 0.26 +0.3 2,645,169 - CA264_11415 0.29 +0.2 2,645,185 + CA264_11415 0.30 +0.5 2,645,185 + CA264_11415 0.30 +0.3 2,645,228 + CA264_11415 0.33 -0.2 2,645,237 - CA264_11415 0.33 +0.6 2,645,298 - CA264_11415 0.38 -0.6 2,645,365 - CA264_11415 0.42 -0.2 2,645,384 + CA264_11415 0.44 +0.8 2,645,385 - CA264_11415 0.44 -0.1 2,645,557 + CA264_11415 0.55 +0.0 2,645,557 + CA264_11415 0.55 -0.5 2,645,558 - CA264_11415 0.55 +0.6 2,645,558 - CA264_11415 0.55 +1.2 2,645,661 + CA264_11415 0.62 +0.1 2,645,693 + CA264_11415 0.65 -0.0 2,645,695 + CA264_11415 0.65 +0.9 2,645,695 + CA264_11415 0.65 +0.8 2,645,695 + CA264_11415 0.65 +0.2 2,645,711 + CA264_11415 0.66 +1.2 2,645,712 - CA264_11415 0.66 +1.0 2,645,712 - CA264_11415 0.66 +0.0 2,645,712 - CA264_11415 0.66 +0.8 2,645,728 - CA264_11415 0.67 -0.1
Or see this region's nucleotide sequence