Experiment: m.b. Tetracycline 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00550 and CA264_00555 are separated by 205 nucleotides CA264_00555 and CA264_00560 are separated by 170 nucleotides CA264_00560 and CA264_00565 are separated by 59 nucleotides CA264_00565 and CA264_00570 are separated by 219 nucleotides
CA264_00550: CA264_00550 - heme oxygenase, at 123,171 to 123,947
_00550
CA264_00555: CA264_00555 - hypothetical protein, at 124,153 to 124,356
_00555
CA264_00560: CA264_00560 - hypothetical protein, at 124,527 to 124,868
_00560
CA264_00565: CA264_00565 - hypothetical protein, at 124,928 to 125,161
_00565
CA264_00570: CA264_00570 - methionine--tRNA ligase, at 125,381 to 127,420
_00570
Position (kb)
124
125
126 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 124.006 kb on + strand at 124.007 kb on - strand at 124.077 kb on + strand at 124.093 kb on - strand at 124.125 kb on + strand at 124.126 kb on - strand at 124.126 kb on - strand at 124.130 kb on + strand at 124.130 kb on + strand at 124.131 kb on - strand at 124.131 kb on - strand at 124.201 kb on + strand, within CA264_00555 at 124.339 kb on - strand at 124.407 kb on - strand at 124.463 kb on - strand at 124.463 kb on - strand at 124.468 kb on + strand at 124.469 kb on - strand at 124.469 kb on - strand at 124.469 kb on - strand at 124.473 kb on + strand at 124.475 kb on + strand at 124.479 kb on + strand at 124.479 kb on + strand at 124.504 kb on + strand at 124.504 kb on + strand at 124.505 kb on - strand at 124.505 kb on - strand at 124.537 kb on - strand at 124.537 kb on - strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.544 kb on - strand at 124.544 kb on - strand at 124.544 kb on - strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.548 kb on - strand at 124.565 kb on - strand, within CA264_00560 at 124.650 kb on + strand, within CA264_00560 at 124.821 kb on + strand, within CA264_00560 at 124.821 kb on + strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.833 kb on + strand, within CA264_00560 at 124.834 kb on - strand at 124.894 kb on - strand at 125.012 kb on + strand, within CA264_00565 at 125.016 kb on + strand, within CA264_00565 at 125.146 kb on + strand at 125.147 kb on - strand at 125.161 kb on + strand at 125.161 kb on + strand at 125.162 kb on - strand at 125.162 kb on - strand at 125.226 kb on - strand at 125.226 kb on - strand at 125.292 kb on + strand at 125.293 kb on - strand at 125.301 kb on - strand at 125.302 kb on + strand at 125.303 kb on - strand at 125.303 kb on - strand at 125.351 kb on - strand at 125.351 kb on - strand at 125.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.006 mg/ml remove 124,006 + -0.3 124,007 - -0.5 124,077 + -1.1 124,093 - -0.9 124,125 + -0.7 124,126 - +2.8 124,126 - +0.2 124,130 + -0.3 124,130 + +0.1 124,131 - -0.3 124,131 - +1.5 124,201 + CA264_00555 0.24 +1.8 124,339 - +0.5 124,407 - -0.2 124,463 - +0.1 124,463 - +0.2 124,468 + -0.1 124,469 - +0.8 124,469 - -1.2 124,469 - +0.0 124,473 + -0.5 124,475 + -0.1 124,479 + +0.4 124,479 + +0.8 124,504 + -0.4 124,504 + +0.8 124,505 - -0.2 124,505 - -0.7 124,537 - -0.1 124,537 - +1.1 124,543 + -0.8 124,543 + -0.1 124,543 + +0.2 124,543 + +1.0 124,543 + -1.2 124,543 + -0.3 124,543 + +0.1 124,544 - -0.2 124,544 - +2.3 124,544 - +0.1 124,545 + -0.1 124,545 + -0.5 124,545 + -0.6 124,545 + +0.1 124,545 + +0.9 124,546 - -0.8 124,546 - -1.4 124,546 - +0.3 124,546 - -0.5 124,546 - +0.9 124,546 - +0.1 124,546 - -0.7 124,548 - -0.2 124,565 - CA264_00560 0.11 -0.1 124,650 + CA264_00560 0.36 -0.0 124,821 + CA264_00560 0.86 +0.2 124,821 + CA264_00560 0.86 +1.8 124,822 - CA264_00560 0.86 +1.5 124,822 - CA264_00560 0.86 -0.5 124,822 - CA264_00560 0.86 +0.0 124,833 + CA264_00560 0.89 +1.2 124,834 - +0.9 124,894 - -2.1 125,012 + CA264_00565 0.36 +0.2 125,016 + CA264_00565 0.38 +0.5 125,146 + -0.0 125,147 - +0.3 125,161 + -1.0 125,161 + -0.1 125,162 - +1.0 125,162 - +0.3 125,226 - +1.3 125,226 - -1.9 125,292 + -1.1 125,293 - -2.0 125,301 - +0.0 125,302 + +0.1 125,303 - -0.7 125,303 - -0.8 125,351 - -0.5 125,351 - -1.7 125,359 - +1.3
Or see this region's nucleotide sequence