Strain Fitness in Escherichia coli BW25113 around b2792

Experiment: Vanillin 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 5 mM
2,920,816	+	yqcA	b2790	0.58	+0.7
2,920,818	-	yqcA	b2790	0.58	-1.3
2,920,818	-	yqcA	b2790	0.58	-0.8
2,920,831	+	yqcA	b2790	0.61	+0.1
2,920,864	+	yqcA	b2790	0.68	-1.0
2,920,864	+	yqcA	b2790	0.68	+1.0
2,920,917	+	yqcA	b2790	0.80	+2.0
2,920,961	+	yqcA	b2790	0.90	-0.2
2,920,995	+				-0.6
2,921,038	+				+0.0
2,921,042	+				+1.3
2,921,050	-				-0.1
2,921,053	+				+0.4
2,921,127	-	yqcB	b2791	0.13	+0.2
2,921,209	-	yqcB	b2791	0.24	-2.6
2,921,317	+	yqcB	b2791	0.37	+0.1
2,921,351	+	yqcB	b2791	0.42	-0.3
2,921,504	+	yqcB	b2791	0.61	+0.6
2,921,504	+	yqcB	b2791	0.61	+1.0
2,921,547	-	yqcB	b2791	0.67	+0.2
2,921,631	-	yqcB	b2791	0.78	-0.1
2,921,637	-	yqcB	b2791	0.78	-0.7
2,921,637	-	yqcB	b2791	0.78	+0.5
2,921,710	-	yqcB	b2791	0.88	+0.7
2,921,710	-	yqcB	b2791	0.88	+0.0
2,921,785	-				-0.1
2,921,795	-				-0.6
2,921,795	-				-1.0
2,921,820	-				+0.3
2,921,882	+	yqcC	b2792	0.23	-0.5
2,921,980	-	yqcC	b2792	0.53	-1.2
2,921,980	-	yqcC	b2792	0.53	-0.6
2,921,992	+	yqcC	b2792	0.56	-0.1
2,922,015	-	yqcC	b2792	0.63	-0.7
2,922,118	-				+0.2
2,922,131	+				+0.1
2,922,194	+				+0.7
2,922,204	-				+0.0
2,922,317	-	csrB	b4408	0.38	-1.3
2,922,407	+	csrB	b4408	0.62	+0.0
2,922,407	+	csrB	b4408	0.62	-0.6
2,922,418	+	csrB	b4408	0.65	+0.4
2,922,443	-	csrB	b4408	0.72	+1.7
2,922,488	-	csrB	b4408	0.84	+0.6
2,922,501	-	csrB	b4408	0.88	+0.4
2,922,544	+				-2.3
2,922,573	+				+0.3
2,922,573	+				-0.3
2,922,686	-				+0.7
2,922,705	+				+1.5
2,922,705	+				+0.4
2,922,717	-				+0.3
2,922,717	-				+0.3
2,922,846	+	syd	b2793	0.16	-0.2
2,922,848	+	syd	b2793	0.17	-0.1
2,922,848	+	syd	b2793	0.17	+0.2
2,922,859	+	syd	b2793	0.19	-0.7
2,922,859	+	syd	b2793	0.19	-0.1
2,922,869	+	syd	b2793	0.21	-2.1
2,922,892	-	syd	b2793	0.25	+0.1
2,922,929	-	syd	b2793	0.32	-0.4
2,922,946	-	syd	b2793	0.35	-2.2
2,922,970	-	syd	b2793	0.39	-0.2
2,922,982	-	syd	b2793	0.41	+0.2
2,923,017	-	syd	b2793	0.48	-1.0
2,923,017	-	syd	b2793	0.48	+1.0
2,923,042	-	syd	b2793	0.52	+0.1
2,923,048	+	syd	b2793	0.53	+0.4
2,923,048	+	syd	b2793	0.53	+1.1
2,923,066	+	syd	b2793	0.57	-0.0