Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26025 and PS417_26030 are separated by 102 nucleotides PS417_26030 and PS417_26035 are separated by 223 nucleotides
PS417_26025: PS417_26025 - serine/threonine protein kinase, at 5,623,467 to 5,624,441
_26025
PS417_26030: PS417_26030 - chloramphenical resistance permease RarD, at 5,624,544 to 5,625,428
_26030
PS417_26035: PS417_26035 - glycine cleavage system protein R, at 5,625,652 to 5,626,164
_26035
Position (kb) 5624
5625
5626 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5623.566 kb on + strand, within PS417_26025 at 5623.582 kb on - strand, within PS417_26025 at 5623.626 kb on + strand, within PS417_26025 at 5623.627 kb on - strand, within PS417_26025 at 5623.676 kb on + strand, within PS417_26025 at 5623.825 kb on - strand at 5623.978 kb on - strand, within PS417_26025 at 5624.022 kb on + strand, within PS417_26025 at 5624.022 kb on + strand, within PS417_26025 at 5624.022 kb on + strand, within PS417_26025 at 5624.022 kb on + strand, within PS417_26025 at 5624.022 kb on + strand, within PS417_26025 at 5624.023 kb on - strand, within PS417_26025 at 5624.023 kb on - strand, within PS417_26025 at 5624.023 kb on - strand, within PS417_26025 at 5624.023 kb on - strand, within PS417_26025 at 5624.292 kb on + strand, within PS417_26025 at 5624.293 kb on - strand, within PS417_26025 at 5624.571 kb on + strand at 5624.572 kb on - strand at 5624.592 kb on + strand at 5624.592 kb on + strand at 5624.592 kb on + strand at 5624.593 kb on - strand at 5624.593 kb on - strand at 5624.619 kb on + strand at 5624.620 kb on - strand at 5624.663 kb on - strand, within PS417_26030 at 5624.811 kb on + strand, within PS417_26030 at 5624.811 kb on + strand, within PS417_26030 at 5624.811 kb on + strand, within PS417_26030 at 5624.811 kb on + strand, within PS417_26030 at 5624.812 kb on - strand, within PS417_26030 at 5624.812 kb on - strand, within PS417_26030 at 5624.812 kb on - strand at 5624.812 kb on - strand, within PS417_26030 at 5624.860 kb on - strand, within PS417_26030 at 5624.862 kb on + strand, within PS417_26030 at 5624.862 kb on + strand, within PS417_26030 at 5624.862 kb on + strand, within PS417_26030 at 5624.862 kb on + strand, within PS417_26030 at 5624.862 kb on + strand, within PS417_26030 at 5624.863 kb on - strand, within PS417_26030 at 5624.863 kb on - strand, within PS417_26030 at 5624.863 kb on - strand, within PS417_26030 at 5624.863 kb on - strand, within PS417_26030 at 5625.258 kb on + strand, within PS417_26030 at 5625.401 kb on + strand at 5625.439 kb on + strand at 5625.636 kb on + strand at 5625.637 kb on - strand at 5625.706 kb on + strand, within PS417_26035 at 5625.706 kb on + strand, within PS417_26035 at 5625.706 kb on - strand, within PS417_26035 at 5625.804 kb on + strand, within PS417_26035 at 5626.140 kb on + strand at 5626.141 kb on - strand at 5626.150 kb on + strand at 5626.189 kb on + strand at 5626.190 kb on - strand at 5626.324 kb on + strand at 5626.325 kb on - strand at 5626.325 kb on - strand at 5626.329 kb on - strand at 5626.360 kb on + strand at 5626.360 kb on + strand at 5626.360 kb on + strand at 5626.360 kb on + strand at 5626.361 kb on - strand at 5626.363 kb on + strand at 5626.363 kb on + strand at 5626.363 kb on + strand at 5626.364 kb on - strand at 5626.380 kb on + strand at 5626.380 kb on + strand at 5626.380 kb on + strand at 5626.380 kb on + strand at 5626.381 kb on - strand at 5626.381 kb on - strand at 5626.384 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,623,566 + PS417_26025 0.10 +0.1 5,623,582 - PS417_26025 0.12 -0.2 5,623,626 + PS417_26025 0.16 -0.8 5,623,627 - PS417_26025 0.16 +0.2 5,623,676 + PS417_26025 0.21 +0.1 5,623,825 - +1.2 5,623,978 - PS417_26025 0.52 -0.2 5,624,022 + PS417_26025 0.57 -0.2 5,624,022 + PS417_26025 0.57 -0.2 5,624,022 + PS417_26025 0.57 +0.1 5,624,022 + PS417_26025 0.57 -0.4 5,624,022 + PS417_26025 0.57 -0.7 5,624,023 - PS417_26025 0.57 +0.9 5,624,023 - PS417_26025 0.57 +1.2 5,624,023 - PS417_26025 0.57 -0.3 5,624,023 - PS417_26025 0.57 -0.8 5,624,292 + PS417_26025 0.85 +0.0 5,624,293 - PS417_26025 0.85 +0.2 5,624,571 + -1.3 5,624,572 - -0.1 5,624,592 + -2.1 5,624,592 + -2.0 5,624,592 + -0.5 5,624,593 - -0.9 5,624,593 - -1.2 5,624,619 + +0.0 5,624,620 - -0.3 5,624,663 - PS417_26030 0.13 -0.8 5,624,811 + PS417_26030 0.30 -1.7 5,624,811 + PS417_26030 0.30 -0.1 5,624,811 + PS417_26030 0.30 -1.0 5,624,811 + PS417_26030 0.30 -1.4 5,624,812 - PS417_26030 0.30 -1.0 5,624,812 - PS417_26030 0.30 -1.1 5,624,812 - +2.2 5,624,812 - PS417_26030 0.30 -1.0 5,624,860 - PS417_26030 0.36 -0.6 5,624,862 + PS417_26030 0.36 -1.8 5,624,862 + PS417_26030 0.36 -0.7 5,624,862 + PS417_26030 0.36 -0.9 5,624,862 + PS417_26030 0.36 +0.4 5,624,862 + PS417_26030 0.36 -0.3 5,624,863 - PS417_26030 0.36 -1.0 5,624,863 - PS417_26030 0.36 +0.9 5,624,863 - PS417_26030 0.36 -0.4 5,624,863 - PS417_26030 0.36 -1.0 5,625,258 + PS417_26030 0.81 -1.0 5,625,401 + -0.6 5,625,439 + -0.6 5,625,636 + -0.4 5,625,637 - -0.7 5,625,706 + PS417_26035 0.11 -0.4 5,625,706 + PS417_26035 0.11 -1.1 5,625,706 - PS417_26035 0.11 -0.5 5,625,804 + PS417_26035 0.30 -0.1 5,626,140 + +0.1 5,626,141 - -0.1 5,626,150 + -0.4 5,626,189 + +1.1 5,626,190 - +1.8 5,626,324 + -0.8 5,626,325 - -1.6 5,626,325 - -0.3 5,626,329 - -0.0 5,626,360 + -0.8 5,626,360 + -0.1 5,626,360 + -0.2 5,626,360 + -0.4 5,626,361 - -2.9 5,626,363 + -0.2 5,626,363 + -0.3 5,626,363 + +0.0 5,626,364 - -2.8 5,626,380 + -0.5 5,626,380 + +0.3 5,626,380 + +0.7 5,626,380 + +0.5 5,626,381 - -1.2 5,626,381 - +0.2 5,626,384 + +0.2
Or see this region's nucleotide sequence