Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01255 and PS417_01260 are separated by 25 nucleotides PS417_01260 and PS417_01265 are separated by 203 nucleotides PS417_01265 and PS417_01270 overlap by 4 nucleotides PS417_01270 and PS417_01275 are separated by 97 nucleotides
PS417_01255: PS417_01255 - thioesterase, at 273,461 to 273,892
_01255
PS417_01260: PS417_01260 - hypothetical protein, at 273,918 to 274,397
_01260
PS417_01265: PS417_01265 - CbbBc protein, at 274,601 to 276,949
_01265
PS417_01270: PS417_01270 - iron ABC transporter substrate-binding protein, at 276,946 to 277,785
_01270
PS417_01275: PS417_01275 - LysR family transcriptional regulator, at 277,883 to 278,770
_01275
Position (kb) 274
275
276
277 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 273.671 kb on + strand, within PS417_01255 at 273.672 kb on - strand, within PS417_01255 at 273.737 kb on - strand, within PS417_01255 at 273.737 kb on - strand, within PS417_01255 at 273.737 kb on - strand, within PS417_01255 at 273.737 kb on - strand, within PS417_01255 at 273.737 kb on - strand, within PS417_01255 at 273.750 kb on - strand, within PS417_01255 at 273.905 kb on - strand at 273.905 kb on - strand at 273.958 kb on + strand at 273.995 kb on - strand, within PS417_01260 at 274.054 kb on + strand, within PS417_01260 at 274.054 kb on + strand, within PS417_01260 at 274.054 kb on + strand, within PS417_01260 at 274.054 kb on + strand at 274.055 kb on - strand, within PS417_01260 at 274.055 kb on - strand, within PS417_01260 at 274.055 kb on - strand, within PS417_01260 at 274.055 kb on - strand, within PS417_01260 at 274.055 kb on - strand, within PS417_01260 at 274.059 kb on - strand, within PS417_01260 at 274.135 kb on - strand, within PS417_01260 at 274.290 kb on + strand, within PS417_01260 at 274.291 kb on - strand, within PS417_01260 at 274.291 kb on - strand, within PS417_01260 at 274.399 kb on - strand at 274.522 kb on + strand at 274.523 kb on - strand at 274.603 kb on - strand at 274.603 kb on - strand at 274.603 kb on - strand at 274.678 kb on + strand at 274.734 kb on + strand at 274.735 kb on - strand at 274.760 kb on - strand at 274.853 kb on + strand, within PS417_01265 at 274.932 kb on + strand, within PS417_01265 at 274.932 kb on + strand, within PS417_01265 at 274.933 kb on - strand, within PS417_01265 at 274.933 kb on - strand, within PS417_01265 at 274.933 kb on - strand, within PS417_01265 at 274.948 kb on - strand, within PS417_01265 at 275.107 kb on - strand, within PS417_01265 at 275.190 kb on + strand, within PS417_01265 at 275.225 kb on - strand, within PS417_01265 at 275.542 kb on + strand, within PS417_01265 at 275.542 kb on + strand, within PS417_01265 at 275.542 kb on + strand, within PS417_01265 at 275.543 kb on - strand, within PS417_01265 at 275.546 kb on + strand, within PS417_01265 at 275.546 kb on + strand, within PS417_01265 at 275.697 kb on - strand, within PS417_01265 at 275.697 kb on - strand, within PS417_01265 at 275.697 kb on - strand, within PS417_01265 at 275.697 kb on - strand, within PS417_01265 at 275.856 kb on + strand, within PS417_01265 at 275.856 kb on + strand, within PS417_01265 at 275.856 kb on + strand, within PS417_01265 at 275.856 kb on + strand, within PS417_01265 at 275.857 kb on - strand, within PS417_01265 at 275.946 kb on + strand, within PS417_01265 at 275.947 kb on - strand, within PS417_01265 at 276.433 kb on - strand, within PS417_01265 at 276.433 kb on - strand, within PS417_01265 at 276.438 kb on + strand, within PS417_01265 at 276.439 kb on - strand, within PS417_01265 at 276.472 kb on - strand, within PS417_01265 at 276.576 kb on + strand, within PS417_01265 at 276.606 kb on + strand, within PS417_01265 at 276.897 kb on + strand at 276.897 kb on + strand at 277.283 kb on + strand, within PS417_01270 at 277.367 kb on - strand, within PS417_01270 at 277.709 kb on + strand at 277.710 kb on - strand at 277.794 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 273,671 + PS417_01255 0.49 -0.2 273,672 - PS417_01255 0.49 +0.7 273,737 - PS417_01255 0.64 -0.1 273,737 - PS417_01255 0.64 +0.0 273,737 - PS417_01255 0.64 -0.4 273,737 - PS417_01255 0.64 -0.0 273,737 - PS417_01255 0.64 +0.7 273,750 - PS417_01255 0.67 +2.3 273,905 - -0.6 273,905 - -0.1 273,958 + +0.7 273,995 - PS417_01260 0.16 +0.3 274,054 + PS417_01260 0.28 +0.2 274,054 + PS417_01260 0.28 -0.4 274,054 + PS417_01260 0.28 -0.2 274,054 + +1.3 274,055 - PS417_01260 0.29 -0.1 274,055 - PS417_01260 0.29 -1.1 274,055 - PS417_01260 0.29 -0.4 274,055 - PS417_01260 0.29 -0.2 274,055 - PS417_01260 0.29 -0.4 274,059 - PS417_01260 0.29 +0.7 274,135 - PS417_01260 0.45 +0.9 274,290 + PS417_01260 0.78 -0.3 274,291 - PS417_01260 0.78 +0.2 274,291 - PS417_01260 0.78 -0.4 274,399 - +0.5 274,522 + +0.1 274,523 - +0.3 274,603 - +0.1 274,603 - +0.4 274,603 - +1.7 274,678 + -0.0 274,734 + -1.1 274,735 - +0.7 274,760 - -0.6 274,853 + PS417_01265 0.11 -0.7 274,932 + PS417_01265 0.14 +1.3 274,932 + PS417_01265 0.14 -0.5 274,933 - PS417_01265 0.14 -1.2 274,933 - PS417_01265 0.14 -2.2 274,933 - PS417_01265 0.14 -0.8 274,948 - PS417_01265 0.15 -1.0 275,107 - PS417_01265 0.22 -0.4 275,190 + PS417_01265 0.25 -1.0 275,225 - PS417_01265 0.27 -1.2 275,542 + PS417_01265 0.40 -2.6 275,542 + PS417_01265 0.40 -0.1 275,542 + PS417_01265 0.40 -0.9 275,543 - PS417_01265 0.40 -0.8 275,546 + PS417_01265 0.40 -2.4 275,546 + PS417_01265 0.40 +1.3 275,697 - PS417_01265 0.47 -0.2 275,697 - PS417_01265 0.47 -1.0 275,697 - PS417_01265 0.47 -2.9 275,697 - PS417_01265 0.47 -1.1 275,856 + PS417_01265 0.53 -0.2 275,856 + PS417_01265 0.53 -1.4 275,856 + PS417_01265 0.53 -0.8 275,856 + PS417_01265 0.53 -1.4 275,857 - PS417_01265 0.53 -0.5 275,946 + PS417_01265 0.57 -0.9 275,947 - PS417_01265 0.57 +1.3 276,433 - PS417_01265 0.78 -1.2 276,433 - PS417_01265 0.78 -0.8 276,438 + PS417_01265 0.78 +2.3 276,439 - PS417_01265 0.78 -0.4 276,472 - PS417_01265 0.80 -0.8 276,576 + PS417_01265 0.84 -1.0 276,606 + PS417_01265 0.85 -0.6 276,897 + +0.3 276,897 + -1.3 277,283 + PS417_01270 0.40 -1.7 277,367 - PS417_01270 0.50 -1.6 277,709 + -1.1 277,710 - -1.1 277,794 - -0.7
Or see this region's nucleotide sequence