Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4602 and Echvi_4603 are separated by 98 nucleotides Echvi_4603 and Echvi_4604 are separated by 64 nucleotides
Echvi_4602: Echvi_4602 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 5,509,354 to 5,511,849
_4602
Echvi_4603: Echvi_4603 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 5,511,948 to 5,513,210
_4603
Echvi_4604: Echvi_4604 - Threonine aldolase, at 5,513,275 to 5,514,282
_4604
Position (kb) 5511
5512
5513
5514 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5511.058 kb on + strand, within Echvi_4602 at 5511.058 kb on + strand, within Echvi_4602 at 5511.059 kb on - strand, within Echvi_4602 at 5511.059 kb on - strand, within Echvi_4602 at 5511.064 kb on + strand, within Echvi_4602 at 5511.190 kb on - strand, within Echvi_4602 at 5511.363 kb on - strand, within Echvi_4602 at 5511.404 kb on + strand, within Echvi_4602 at 5511.429 kb on + strand, within Echvi_4602 at 5511.430 kb on - strand, within Echvi_4602 at 5511.430 kb on - strand, within Echvi_4602 at 5511.430 kb on - strand, within Echvi_4602 at 5511.484 kb on + strand, within Echvi_4602 at 5511.512 kb on + strand, within Echvi_4602 at 5511.512 kb on + strand, within Echvi_4602 at 5511.635 kb on + strand at 5511.670 kb on + strand at 5511.671 kb on - strand at 5511.678 kb on + strand at 5511.679 kb on - strand at 5511.730 kb on + strand at 5511.730 kb on + strand at 5511.731 kb on - strand at 5511.731 kb on - strand at 5511.731 kb on - strand at 5512.028 kb on - strand at 5512.071 kb on + strand at 5512.099 kb on + strand, within Echvi_4603 at 5512.099 kb on + strand, within Echvi_4603 at 5512.100 kb on - strand, within Echvi_4603 at 5512.100 kb on - strand, within Echvi_4603 at 5512.106 kb on - strand, within Echvi_4603 at 5512.223 kb on - strand, within Echvi_4603 at 5512.255 kb on + strand, within Echvi_4603 at 5512.445 kb on - strand, within Echvi_4603 at 5512.504 kb on + strand, within Echvi_4603 at 5512.505 kb on - strand, within Echvi_4603 at 5512.528 kb on + strand, within Echvi_4603 at 5512.620 kb on + strand, within Echvi_4603 at 5512.681 kb on - strand, within Echvi_4603 at 5512.772 kb on + strand, within Echvi_4603 at 5512.840 kb on - strand, within Echvi_4603 at 5512.895 kb on + strand, within Echvi_4603 at 5512.896 kb on - strand, within Echvi_4603 at 5512.997 kb on + strand, within Echvi_4603 at 5513.003 kb on + strand, within Echvi_4603 at 5513.213 kb on - strand at 5513.213 kb on - strand at 5513.538 kb on + strand, within Echvi_4604 at 5513.538 kb on + strand, within Echvi_4604 at 5513.539 kb on - strand, within Echvi_4604 at 5513.555 kb on + strand, within Echvi_4604 at 5513.555 kb on + strand, within Echvi_4604 at 5513.592 kb on + strand, within Echvi_4604 at 5513.657 kb on - strand at 5513.843 kb on + strand, within Echvi_4604 at 5513.908 kb on + strand, within Echvi_4604 at 5513.909 kb on - strand, within Echvi_4604 at 5513.909 kb on - strand, within Echvi_4604 at 5513.909 kb on - strand, within Echvi_4604 at 5513.950 kb on + strand, within Echvi_4604 at 5513.950 kb on + strand, within Echvi_4604 at 5513.950 kb on + strand, within Echvi_4604 at 5514.026 kb on + strand, within Echvi_4604 at 5514.030 kb on + strand, within Echvi_4604 at 5514.205 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 5,511,058 + Echvi_4602 0.68 -0.5 5,511,058 + Echvi_4602 0.68 +0.9 5,511,059 - Echvi_4602 0.68 -0.2 5,511,059 - Echvi_4602 0.68 -0.9 5,511,064 + Echvi_4602 0.69 +0.5 5,511,190 - Echvi_4602 0.74 +1.3 5,511,363 - Echvi_4602 0.80 -0.5 5,511,404 + Echvi_4602 0.82 +0.0 5,511,429 + Echvi_4602 0.83 -0.2 5,511,430 - Echvi_4602 0.83 +1.0 5,511,430 - Echvi_4602 0.83 -0.8 5,511,430 - Echvi_4602 0.83 -1.2 5,511,484 + Echvi_4602 0.85 -0.4 5,511,512 + Echvi_4602 0.86 -0.3 5,511,512 + Echvi_4602 0.86 +1.7 5,511,635 + -2.0 5,511,670 + +0.5 5,511,671 - +0.0 5,511,678 + -0.7 5,511,679 - -0.6 5,511,730 + -1.3 5,511,730 + +0.4 5,511,731 - -1.0 5,511,731 - -0.4 5,511,731 - -0.3 5,512,028 - +0.7 5,512,071 + -0.1 5,512,099 + Echvi_4603 0.12 -1.3 5,512,099 + Echvi_4603 0.12 -1.5 5,512,100 - Echvi_4603 0.12 -2.2 5,512,100 - Echvi_4603 0.12 -0.2 5,512,106 - Echvi_4603 0.13 -2.2 5,512,223 - Echvi_4603 0.22 -1.5 5,512,255 + Echvi_4603 0.24 -2.0 5,512,445 - Echvi_4603 0.39 +0.7 5,512,504 + Echvi_4603 0.44 -0.3 5,512,505 - Echvi_4603 0.44 -0.9 5,512,528 + Echvi_4603 0.46 -3.4 5,512,620 + Echvi_4603 0.53 -2.7 5,512,681 - Echvi_4603 0.58 -2.5 5,512,772 + Echvi_4603 0.65 -2.2 5,512,840 - Echvi_4603 0.71 -1.1 5,512,895 + Echvi_4603 0.75 -0.6 5,512,896 - Echvi_4603 0.75 -2.5 5,512,997 + Echvi_4603 0.83 -1.0 5,513,003 + Echvi_4603 0.84 -1.8 5,513,213 - -1.0 5,513,213 - -2.8 5,513,538 + Echvi_4604 0.26 -0.6 5,513,538 + Echvi_4604 0.26 -0.2 5,513,539 - Echvi_4604 0.26 +0.9 5,513,555 + Echvi_4604 0.28 +0.4 5,513,555 + Echvi_4604 0.28 +1.5 5,513,592 + Echvi_4604 0.31 +0.0 5,513,657 - +0.7 5,513,843 + Echvi_4604 0.56 -1.1 5,513,908 + Echvi_4604 0.63 +1.0 5,513,909 - Echvi_4604 0.63 +0.3 5,513,909 - Echvi_4604 0.63 +1.4 5,513,909 - Echvi_4604 0.63 -0.1 5,513,950 + Echvi_4604 0.67 +1.5 5,513,950 + Echvi_4604 0.67 -0.7 5,513,950 + Echvi_4604 0.67 +0.5 5,514,026 + Echvi_4604 0.75 +0.2 5,514,030 + Echvi_4604 0.75 +0.5 5,514,205 + +0.3
Or see this region's nucleotide sequence