Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1830 and Echvi_1831 are separated by 150 nucleotides Echvi_1831 and Echvi_1832 are separated by 52 nucleotides
Echvi_1830: Echvi_1830 - hypothetical protein, at 2,145,921 to 2,146,910
_1830
Echvi_1831: Echvi_1831 - Fe2+/Zn2+ uptake regulation proteins, at 2,147,061 to 2,147,474
_1831
Echvi_1832: Echvi_1832 - Peroxiredoxin, at 2,147,527 to 2,148,156
_1832
Position (kb)
2147
2148 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2146.068 kb on + strand, within Echvi_1830 at 2146.068 kb on + strand, within Echvi_1830 at 2146.099 kb on + strand, within Echvi_1830 at 2146.100 kb on - strand, within Echvi_1830 at 2146.112 kb on + strand, within Echvi_1830 at 2146.113 kb on - strand, within Echvi_1830 at 2146.113 kb on - strand, within Echvi_1830 at 2146.136 kb on + strand, within Echvi_1830 at 2146.136 kb on + strand, within Echvi_1830 at 2146.137 kb on - strand, within Echvi_1830 at 2146.153 kb on + strand, within Echvi_1830 at 2146.154 kb on - strand, within Echvi_1830 at 2146.237 kb on - strand, within Echvi_1830 at 2146.248 kb on - strand, within Echvi_1830 at 2146.249 kb on + strand, within Echvi_1830 at 2146.250 kb on - strand, within Echvi_1830 at 2146.250 kb on - strand, within Echvi_1830 at 2146.263 kb on + strand, within Echvi_1830 at 2146.263 kb on + strand, within Echvi_1830 at 2146.263 kb on + strand, within Echvi_1830 at 2146.263 kb on + strand, within Echvi_1830 at 2146.271 kb on + strand, within Echvi_1830 at 2146.271 kb on + strand, within Echvi_1830 at 2146.272 kb on - strand, within Echvi_1830 at 2146.274 kb on - strand, within Echvi_1830 at 2146.274 kb on - strand, within Echvi_1830 at 2146.274 kb on - strand, within Echvi_1830 at 2146.303 kb on - strand, within Echvi_1830 at 2146.303 kb on - strand, within Echvi_1830 at 2146.303 kb on - strand, within Echvi_1830 at 2146.345 kb on - strand, within Echvi_1830 at 2146.345 kb on - strand, within Echvi_1830 at 2146.365 kb on + strand, within Echvi_1830 at 2146.397 kb on + strand, within Echvi_1830 at 2146.434 kb on + strand, within Echvi_1830 at 2146.435 kb on - strand, within Echvi_1830 at 2146.465 kb on + strand, within Echvi_1830 at 2146.465 kb on + strand, within Echvi_1830 at 2146.465 kb on + strand, within Echvi_1830 at 2146.465 kb on + strand, within Echvi_1830 at 2146.465 kb on + strand, within Echvi_1830 at 2146.465 kb on + strand, within Echvi_1830 at 2146.465 kb on + strand, within Echvi_1830 at 2146.528 kb on + strand, within Echvi_1830 at 2146.528 kb on + strand, within Echvi_1830 at 2146.528 kb on + strand, within Echvi_1830 at 2146.528 kb on + strand, within Echvi_1830 at 2146.529 kb on - strand, within Echvi_1830 at 2146.529 kb on - strand, within Echvi_1830 at 2146.530 kb on + strand, within Echvi_1830 at 2146.531 kb on - strand, within Echvi_1830 at 2146.539 kb on + strand, within Echvi_1830 at 2146.540 kb on - strand, within Echvi_1830 at 2146.565 kb on - strand, within Echvi_1830 at 2146.566 kb on + strand, within Echvi_1830 at 2146.567 kb on - strand, within Echvi_1830 at 2146.619 kb on - strand, within Echvi_1830 at 2146.631 kb on + strand, within Echvi_1830 at 2146.660 kb on - strand, within Echvi_1830 at 2146.701 kb on + strand, within Echvi_1830 at 2146.702 kb on - strand, within Echvi_1830 at 2146.745 kb on + strand, within Echvi_1830 at 2146.746 kb on - strand, within Echvi_1830 at 2146.746 kb on - strand, within Echvi_1830 at 2146.746 kb on - strand, within Echvi_1830 at 2146.748 kb on - strand, within Echvi_1830 at 2146.751 kb on - strand, within Echvi_1830 at 2146.773 kb on + strand, within Echvi_1830 at 2146.777 kb on + strand, within Echvi_1830 at 2146.777 kb on + strand, within Echvi_1830 at 2146.777 kb on + strand, within Echvi_1830 at 2146.777 kb on + strand, within Echvi_1830 at 2146.778 kb on - strand, within Echvi_1830 at 2146.780 kb on + strand, within Echvi_1830 at 2146.789 kb on + strand, within Echvi_1830 at 2146.789 kb on + strand, within Echvi_1830 at 2146.790 kb on - strand, within Echvi_1830 at 2146.808 kb on + strand, within Echvi_1830 at 2146.832 kb on + strand at 2146.837 kb on - strand at 2146.837 kb on - strand at 2146.940 kb on - strand at 2147.007 kb on - strand at 2147.112 kb on - strand, within Echvi_1831 at 2147.181 kb on + strand, within Echvi_1831 at 2147.182 kb on - strand, within Echvi_1831 at 2147.211 kb on - strand, within Echvi_1831 at 2147.230 kb on - strand, within Echvi_1831 at 2147.230 kb on - strand, within Echvi_1831 at 2147.243 kb on + strand, within Echvi_1831 at 2147.261 kb on + strand, within Echvi_1831 at 2147.262 kb on - strand, within Echvi_1831 at 2147.262 kb on - strand, within Echvi_1831 at 2147.262 kb on - strand, within Echvi_1831 at 2147.324 kb on + strand, within Echvi_1831 at 2147.444 kb on - strand at 2147.444 kb on - strand at 2147.444 kb on - strand at 2147.444 kb on - strand at 2147.500 kb on + strand at 2147.500 kb on + strand at 2147.500 kb on + strand at 2147.501 kb on - strand at 2147.505 kb on - strand at 2147.512 kb on + strand at 2147.513 kb on - strand at 2147.534 kb on + strand at 2147.534 kb on + strand at 2147.534 kb on + strand at 2147.534 kb on + strand at 2147.535 kb on - strand at 2147.535 kb on - strand at 2147.556 kb on - strand at 2147.598 kb on + strand, within Echvi_1832 at 2147.599 kb on - strand, within Echvi_1832 at 2147.644 kb on + strand, within Echvi_1832 at 2147.644 kb on + strand, within Echvi_1832 at 2147.645 kb on - strand, within Echvi_1832 at 2147.794 kb on - strand, within Echvi_1832 at 2147.824 kb on + strand, within Echvi_1832 at 2147.862 kb on + strand, within Echvi_1832 at 2147.893 kb on + strand, within Echvi_1832 at 2147.893 kb on + strand, within Echvi_1832 at 2147.917 kb on + strand, within Echvi_1832 at 2148.039 kb on - strand, within Echvi_1832 at 2148.099 kb on + strand at 2148.132 kb on - strand at 2148.132 kb on - strand at 2148.140 kb on - strand at 2148.143 kb on + strand at 2148.144 kb on - strand at 2148.147 kb on + strand at 2148.148 kb on - strand at 2148.178 kb on - strand at 2148.182 kb on + strand at 2148.231 kb on + strand at 2148.232 kb on - strand at 2148.232 kb on - strand at 2148.235 kb on - strand at 2148.253 kb on + strand at 2148.280 kb on + strand at 2148.470 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,146,068 + Echvi_1830 0.15 +0.5 2,146,068 + Echvi_1830 0.15 -0.9 2,146,099 + Echvi_1830 0.18 +1.8 2,146,100 - Echvi_1830 0.18 +3.8 2,146,112 + Echvi_1830 0.19 +1.5 2,146,113 - Echvi_1830 0.19 +0.8 2,146,113 - Echvi_1830 0.19 +2.1 2,146,136 + Echvi_1830 0.22 -0.4 2,146,136 + Echvi_1830 0.22 -2.1 2,146,137 - Echvi_1830 0.22 -0.6 2,146,153 + Echvi_1830 0.23 +0.4 2,146,154 - Echvi_1830 0.24 -0.6 2,146,237 - Echvi_1830 0.32 +0.0 2,146,248 - Echvi_1830 0.33 -0.7 2,146,249 + Echvi_1830 0.33 -0.0 2,146,250 - Echvi_1830 0.33 +1.4 2,146,250 - Echvi_1830 0.33 +2.8 2,146,263 + Echvi_1830 0.35 -0.2 2,146,263 + Echvi_1830 0.35 +1.2 2,146,263 + Echvi_1830 0.35 -1.3 2,146,263 + Echvi_1830 0.35 +0.6 2,146,271 + Echvi_1830 0.35 +1.6 2,146,271 + Echvi_1830 0.35 -0.2 2,146,272 - Echvi_1830 0.35 -1.8 2,146,274 - Echvi_1830 0.36 -1.0 2,146,274 - Echvi_1830 0.36 +0.2 2,146,274 - Echvi_1830 0.36 -0.2 2,146,303 - Echvi_1830 0.39 +0.7 2,146,303 - Echvi_1830 0.39 -0.6 2,146,303 - Echvi_1830 0.39 -0.0 2,146,345 - Echvi_1830 0.43 +0.8 2,146,345 - Echvi_1830 0.43 -1.0 2,146,365 + Echvi_1830 0.45 +0.2 2,146,397 + Echvi_1830 0.48 +0.5 2,146,434 + Echvi_1830 0.52 +0.2 2,146,435 - Echvi_1830 0.52 +0.7 2,146,465 + Echvi_1830 0.55 +1.5 2,146,465 + Echvi_1830 0.55 +0.1 2,146,465 + Echvi_1830 0.55 -1.7 2,146,465 + Echvi_1830 0.55 +1.2 2,146,465 + Echvi_1830 0.55 +0.6 2,146,465 + Echvi_1830 0.55 +0.4 2,146,465 + Echvi_1830 0.55 -0.1 2,146,528 + Echvi_1830 0.61 -0.2 2,146,528 + Echvi_1830 0.61 -1.3 2,146,528 + Echvi_1830 0.61 -0.2 2,146,528 + Echvi_1830 0.61 -0.3 2,146,529 - Echvi_1830 0.61 -0.6 2,146,529 - Echvi_1830 0.61 +0.1 2,146,530 + Echvi_1830 0.62 +0.2 2,146,531 - Echvi_1830 0.62 -1.2 2,146,539 + Echvi_1830 0.62 -0.4 2,146,540 - Echvi_1830 0.63 +0.2 2,146,565 - Echvi_1830 0.65 +2.9 2,146,566 + Echvi_1830 0.65 +1.0 2,146,567 - Echvi_1830 0.65 +1.5 2,146,619 - Echvi_1830 0.71 -1.0 2,146,631 + Echvi_1830 0.72 -0.8 2,146,660 - Echvi_1830 0.75 +0.4 2,146,701 + Echvi_1830 0.79 -0.0 2,146,702 - Echvi_1830 0.79 -0.0 2,146,745 + Echvi_1830 0.83 +0.5 2,146,746 - Echvi_1830 0.83 +2.2 2,146,746 - Echvi_1830 0.83 +1.5 2,146,746 - Echvi_1830 0.83 -0.8 2,146,748 - Echvi_1830 0.84 +0.2 2,146,751 - Echvi_1830 0.84 -0.4 2,146,773 + Echvi_1830 0.86 +0.1 2,146,777 + Echvi_1830 0.86 +0.7 2,146,777 + Echvi_1830 0.86 -0.3 2,146,777 + Echvi_1830 0.86 -0.8 2,146,777 + Echvi_1830 0.86 -0.0 2,146,778 - Echvi_1830 0.87 +1.8 2,146,780 + Echvi_1830 0.87 +0.6 2,146,789 + Echvi_1830 0.88 -0.0 2,146,789 + Echvi_1830 0.88 +0.7 2,146,790 - Echvi_1830 0.88 +0.3 2,146,808 + Echvi_1830 0.90 +1.0 2,146,832 + -1.2 2,146,837 - +1.2 2,146,837 - -0.0 2,146,940 - -0.3 2,147,007 - +0.4 2,147,112 - Echvi_1831 0.12 -0.3 2,147,181 + Echvi_1831 0.29 -0.8 2,147,182 - Echvi_1831 0.29 -1.7 2,147,211 - Echvi_1831 0.36 -0.9 2,147,230 - Echvi_1831 0.41 -1.3 2,147,230 - Echvi_1831 0.41 +2.1 2,147,243 + Echvi_1831 0.44 -1.5 2,147,261 + Echvi_1831 0.48 -0.6 2,147,262 - Echvi_1831 0.49 -0.7 2,147,262 - Echvi_1831 0.49 -1.4 2,147,262 - Echvi_1831 0.49 -1.9 2,147,324 + Echvi_1831 0.64 +0.0 2,147,444 - +0.5 2,147,444 - -1.4 2,147,444 - -0.5 2,147,444 - +1.2 2,147,500 + -1.2 2,147,500 + -0.6 2,147,500 + -0.7 2,147,501 - -0.8 2,147,505 - -1.1 2,147,512 + -2.5 2,147,513 - +0.2 2,147,534 + +1.5 2,147,534 + +0.2 2,147,534 + -1.0 2,147,534 + -0.4 2,147,535 - -0.2 2,147,535 - -0.2 2,147,556 - -1.0 2,147,598 + Echvi_1832 0.11 -1.6 2,147,599 - Echvi_1832 0.11 -1.2 2,147,644 + Echvi_1832 0.19 -0.6 2,147,644 + Echvi_1832 0.19 -1.2 2,147,645 - Echvi_1832 0.19 -0.2 2,147,794 - Echvi_1832 0.42 +1.1 2,147,824 + Echvi_1832 0.47 +0.8 2,147,862 + Echvi_1832 0.53 +0.2 2,147,893 + Echvi_1832 0.58 +0.2 2,147,893 + Echvi_1832 0.58 -0.6 2,147,917 + Echvi_1832 0.62 -1.1 2,148,039 - Echvi_1832 0.81 +1.0 2,148,099 + -0.5 2,148,132 - -0.6 2,148,132 - -0.8 2,148,140 - -1.1 2,148,143 + +0.9 2,148,144 - +3.8 2,148,147 + +1.8 2,148,148 - -0.1 2,148,178 - -0.5 2,148,182 + -0.2 2,148,231 + -1.2 2,148,232 - -0.2 2,148,232 - +0.0 2,148,235 - +1.1 2,148,253 + +0.7 2,148,280 + +0.8 2,148,470 - -0.1
Or see this region's nucleotide sequence