Experiment: m.b. Tetracycline 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13365 and CA264_13370 are separated by 3 nucleotides CA264_13370 and CA264_13375 are separated by 307 nucleotides CA264_13375 and CA264_13380 are separated by 21 nucleotides CA264_13380 and CA264_13385 are separated by 128 nucleotides
CA264_13365: CA264_13365 - molecular chaperone DnaJ, at 3,117,105 to 3,118,256
_13365
CA264_13370: CA264_13370 - nucleotide exchange factor GrpE, at 3,118,260 to 3,118,826
_13370
CA264_13375: CA264_13375 - GTPase Obg, at 3,119,134 to 3,120,126
_13375
CA264_13380: CA264_13380 - adenylate kinase, at 3,120,148 to 3,120,744
_13380
CA264_13385: CA264_13385 - hypoxanthine phosphoribosyltransferase, at 3,120,873 to 3,121,415
_13385
Position (kb)
3119
3120
3121 Strain fitness (log2 ratio)
-1
0
1
2 at 3118.261 kb on + strand at 3118.270 kb on - strand at 3118.826 kb on + strand at 3118.827 kb on - strand at 3118.858 kb on - strand at 3119.020 kb on - strand at 3119.078 kb on - strand at 3119.114 kb on + strand at 3119.114 kb on + strand at 3120.772 kb on + strand at 3120.772 kb on + strand at 3120.773 kb on - strand at 3120.775 kb on - strand at 3120.775 kb on - strand at 3120.775 kb on - strand at 3120.780 kb on + strand at 3120.780 kb on + strand at 3120.791 kb on + strand at 3120.823 kb on - strand at 3120.922 kb on + strand at 3120.974 kb on - strand, within CA264_13385 at 3120.974 kb on - strand, within CA264_13385 at 3120.985 kb on - strand, within CA264_13385 at 3121.065 kb on + strand, within CA264_13385 at 3121.066 kb on - strand, within CA264_13385
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.003 mg/ml remove 3,118,261 + -0.8 3,118,270 - -0.9 3,118,826 + +0.3 3,118,827 - +0.3 3,118,858 - +0.3 3,119,020 - -0.0 3,119,078 - -0.2 3,119,114 + -0.2 3,119,114 + +0.6 3,120,772 + +1.9 3,120,772 + +0.3 3,120,773 - +0.4 3,120,775 - +0.5 3,120,775 - +0.4 3,120,775 - -0.4 3,120,780 + +0.3 3,120,780 + -0.0 3,120,791 + -0.1 3,120,823 - +0.8 3,120,922 + -0.3 3,120,974 - CA264_13385 0.19 -1.0 3,120,974 - CA264_13385 0.19 -0.9 3,120,985 - CA264_13385 0.21 -1.0 3,121,065 + CA264_13385 0.35 -0.5 3,121,066 - CA264_13385 0.36 -1.1
Or see this region's nucleotide sequence