Experiment: m.b. Tetracycline 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10995 and CA264_11000 are separated by 2 nucleotides CA264_11000 and CA264_11005 are separated by 5 nucleotides CA264_11005 and CA264_11010 are separated by 65 nucleotides
CA264_10995: CA264_10995 - hypothetical protein, at 2,535,154 to 2,536,365
_10995
CA264_11000: CA264_11000 - methionyl-tRNA formyltransferase, at 2,536,368 to 2,537,297
_11000
CA264_11005: CA264_11005 - dihydrofolate reductase, at 2,537,303 to 2,537,788
_11005
CA264_11010: CA264_11010 - hypothetical protein, at 2,537,854 to 2,542,860
_11010
Position (kb)
2537
2538 Strain fitness (log2 ratio)
-1
0
1
2 at 2536.311 kb on - strand at 2536.318 kb on + strand at 2536.321 kb on - strand at 2536.340 kb on - strand at 2536.359 kb on + strand at 2536.363 kb on + strand at 2536.363 kb on + strand at 2536.363 kb on + strand at 2536.363 kb on + strand at 2536.367 kb on + strand at 2536.367 kb on + strand at 2536.367 kb on + strand at 2536.368 kb on - strand at 2536.368 kb on - strand at 2536.368 kb on - strand at 2537.294 kb on - strand at 2537.294 kb on - strand at 2537.303 kb on - strand at 2537.787 kb on - strand at 2537.787 kb on - strand at 2537.789 kb on + strand at 2537.790 kb on - strand at 2537.855 kb on + strand at 2537.855 kb on + strand at 2537.867 kb on + strand at 2537.874 kb on + strand at 2537.875 kb on - strand at 2537.963 kb on + strand at 2537.964 kb on - strand at 2537.990 kb on + strand at 2537.990 kb on + strand at 2537.990 kb on + strand at 2537.990 kb on + strand at 2538.015 kb on - strand at 2538.015 kb on - strand at 2538.015 kb on - strand at 2538.027 kb on + strand at 2538.027 kb on + strand at 2538.142 kb on - strand at 2538.186 kb on - strand at 2538.320 kb on + strand at 2538.320 kb on + strand at 2538.321 kb on - strand at 2538.359 kb on + strand, within CA264_11010 at 2538.359 kb on + strand, within CA264_11010 at 2538.360 kb on - strand, within CA264_11010 at 2538.360 kb on - strand, within CA264_11010 at 2538.360 kb on - strand, within CA264_11010 at 2538.365 kb on - strand, within CA264_11010 at 2538.525 kb on + strand, within CA264_11010 at 2538.526 kb on - strand, within CA264_11010 at 2538.526 kb on - strand, within CA264_11010 at 2538.603 kb on + strand, within CA264_11010 at 2538.603 kb on + strand, within CA264_11010 at 2538.604 kb on - strand, within CA264_11010 at 2538.642 kb on - strand, within CA264_11010 at 2538.688 kb on - strand, within CA264_11010 at 2538.689 kb on + strand, within CA264_11010 at 2538.690 kb on - strand, within CA264_11010 at 2538.728 kb on - strand, within CA264_11010 at 2538.744 kb on + strand, within CA264_11010
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.003 mg/ml remove 2,536,311 - +0.2 2,536,318 + +0.6 2,536,321 - -0.1 2,536,340 - -0.7 2,536,359 + -0.1 2,536,363 + +0.5 2,536,363 + -0.9 2,536,363 + -0.6 2,536,363 + -0.1 2,536,367 + -1.5 2,536,367 + -0.7 2,536,367 + +0.2 2,536,368 - +0.7 2,536,368 - +0.1 2,536,368 - -0.2 2,537,294 - +0.9 2,537,294 - -0.9 2,537,303 - +0.0 2,537,787 - -1.7 2,537,787 - -0.3 2,537,789 + -0.1 2,537,790 - -0.1 2,537,855 + -0.5 2,537,855 + -0.2 2,537,867 + +1.6 2,537,874 + +1.5 2,537,875 - -0.3 2,537,963 + +1.8 2,537,964 - +0.7 2,537,990 + -0.1 2,537,990 + -0.9 2,537,990 + +0.6 2,537,990 + +0.1 2,538,015 - +1.3 2,538,015 - +1.6 2,538,015 - +2.3 2,538,027 + +2.3 2,538,027 + +1.5 2,538,142 - +0.4 2,538,186 - +0.1 2,538,320 + +1.7 2,538,320 + +0.7 2,538,321 - +0.4 2,538,359 + CA264_11010 0.10 -0.1 2,538,359 + CA264_11010 0.10 +1.1 2,538,360 - CA264_11010 0.10 +1.7 2,538,360 - CA264_11010 0.10 +0.5 2,538,360 - CA264_11010 0.10 +1.5 2,538,365 - CA264_11010 0.10 +1.4 2,538,525 + CA264_11010 0.13 -0.3 2,538,526 - CA264_11010 0.13 +1.2 2,538,526 - CA264_11010 0.13 +1.1 2,538,603 + CA264_11010 0.15 +1.5 2,538,603 + CA264_11010 0.15 +0.6 2,538,604 - CA264_11010 0.15 +0.1 2,538,642 - CA264_11010 0.16 +1.3 2,538,688 - CA264_11010 0.17 -0.3 2,538,689 + CA264_11010 0.17 +1.3 2,538,690 - CA264_11010 0.17 +1.4 2,538,728 - CA264_11010 0.17 +1.2 2,538,744 + CA264_11010 0.18 +0.4
Or see this region's nucleotide sequence