Experiment: m.b. Tetracycline 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06095 and CA264_06100 are separated by 112 nucleotides CA264_06100 and CA264_06105 are separated by 210 nucleotides CA264_06105 and CA264_06110 are separated by 180 nucleotides
CA264_06095: CA264_06095 - hypothetical protein, at 1,425,155 to 1,425,460
_06095
CA264_06100: CA264_06100 - riboflavin synthase, at 1,425,573 to 1,426,157
_06100
CA264_06105: CA264_06105 - protein-L-isoaspartate O-methyltransferase, at 1,426,368 to 1,427,027
_06105
CA264_06110: CA264_06110 - hypothetical protein, at 1,427,208 to 1,428,164
_06110
Position (kb)
1426
1427
1428 Strain fitness (log2 ratio)
-2
-1
0
1 at 1425.377 kb on + strand, within CA264_06095 at 1425.463 kb on + strand at 1425.485 kb on + strand at 1425.486 kb on - strand at 1425.494 kb on + strand at 1425.583 kb on - strand at 1425.595 kb on - strand at 1426.157 kb on + strand at 1426.157 kb on + strand at 1426.329 kb on - strand at 1426.329 kb on - strand at 1426.329 kb on - strand at 1426.329 kb on - strand at 1426.334 kb on + strand at 1426.352 kb on + strand at 1426.352 kb on + strand at 1426.353 kb on - strand at 1426.356 kb on + strand at 1426.357 kb on - strand at 1426.357 kb on - strand at 1426.360 kb on + strand at 1426.617 kb on - strand, within CA264_06105 at 1426.674 kb on - strand, within CA264_06105 at 1426.698 kb on + strand, within CA264_06105 at 1426.881 kb on - strand, within CA264_06105 at 1427.025 kb on + strand at 1427.026 kb on - strand at 1427.100 kb on + strand at 1427.120 kb on - strand at 1427.122 kb on - strand at 1427.122 kb on - strand at 1427.167 kb on - strand at 1427.285 kb on + strand at 1427.309 kb on + strand, within CA264_06110 at 1427.400 kb on + strand, within CA264_06110 at 1427.400 kb on + strand, within CA264_06110 at 1427.400 kb on + strand, within CA264_06110 at 1427.401 kb on - strand, within CA264_06110 at 1427.401 kb on - strand, within CA264_06110 at 1427.404 kb on + strand, within CA264_06110 at 1427.500 kb on - strand, within CA264_06110 at 1427.610 kb on + strand, within CA264_06110 at 1427.611 kb on - strand, within CA264_06110 at 1427.665 kb on + strand, within CA264_06110 at 1427.804 kb on + strand, within CA264_06110 at 1427.805 kb on - strand, within CA264_06110 at 1427.834 kb on + strand, within CA264_06110 at 1427.834 kb on + strand, within CA264_06110 at 1428.000 kb on - strand, within CA264_06110
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.003 mg/ml remove 1,425,377 + CA264_06095 0.73 -0.5 1,425,463 + +1.5 1,425,485 + +0.7 1,425,486 - -0.2 1,425,494 + +0.5 1,425,583 - -0.4 1,425,595 - +0.1 1,426,157 + +0.6 1,426,157 + -0.6 1,426,329 - +0.9 1,426,329 - -0.1 1,426,329 - -0.1 1,426,329 - +0.3 1,426,334 + -0.7 1,426,352 + -0.5 1,426,352 + -0.3 1,426,353 - -0.0 1,426,356 + -0.3 1,426,357 - -0.8 1,426,357 - -0.0 1,426,360 + -0.5 1,426,617 - CA264_06105 0.38 -2.5 1,426,674 - CA264_06105 0.46 -1.0 1,426,698 + CA264_06105 0.50 -2.2 1,426,881 - CA264_06105 0.78 -0.9 1,427,025 + -0.3 1,427,026 - -0.4 1,427,100 + +0.3 1,427,120 - +0.6 1,427,122 - -0.1 1,427,122 - +0.1 1,427,167 - +0.3 1,427,285 + -1.5 1,427,309 + CA264_06110 0.11 -0.4 1,427,400 + CA264_06110 0.20 -0.6 1,427,400 + CA264_06110 0.20 -0.0 1,427,400 + CA264_06110 0.20 +0.4 1,427,401 - CA264_06110 0.20 +0.6 1,427,401 - CA264_06110 0.20 -0.6 1,427,404 + CA264_06110 0.20 +0.7 1,427,500 - CA264_06110 0.31 -0.5 1,427,610 + CA264_06110 0.42 -0.1 1,427,611 - CA264_06110 0.42 +0.0 1,427,665 + CA264_06110 0.48 -0.9 1,427,804 + CA264_06110 0.62 +0.1 1,427,805 - CA264_06110 0.62 -1.9 1,427,834 + CA264_06110 0.65 +0.1 1,427,834 + CA264_06110 0.65 +0.7 1,428,000 - CA264_06110 0.83 +0.6
Or see this region's nucleotide sequence