Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04920
Experiment: m.b. Tetracycline 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Tetracycline 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,140,709 | - | -1.2 | |||
1,140,875 | + | CA264_04915 | 0.39 | +2.3 | |
1,141,009 | + | +0.3 | |||
1,142,404 | - | +0.2 | |||
1,142,471 | - | +0.3 | |||
1,142,471 | - | -0.8 | |||
1,142,472 | + | +0.1 | |||
1,142,511 | + | -0.5 | |||
1,142,511 | + | -1.2 | |||
1,142,512 | - | -0.8 | |||
1,142,576 | + | -0.2 | |||
1,142,576 | + | +0.2 | |||
1,142,579 | - | +0.1 | |||
1,142,633 | - | +0.7 | |||
1,142,708 | + | -0.1 | |||
1,142,708 | + | -0.1 | |||
1,142,709 | - | +1.6 | |||
1,142,710 | + | -1.1 | |||
1,142,710 | + | -0.5 | |||
1,142,711 | - | +0.8 | |||
1,142,720 | - | -0.3 | |||
1,142,720 | - | +0.9 | |||
1,142,793 | - | -1.2 | |||
1,142,803 | + | +0.8 | |||
1,142,803 | + | -0.1 | |||
1,143,006 | - | CA264_04925 | 0.28 | +0.8 | |
1,143,006 | - | CA264_04925 | 0.28 | -0.5 | |
1,143,023 | + | CA264_04925 | 0.30 | +0.9 | |
1,143,024 | - | CA264_04925 | 0.30 | -1.7 | |
1,143,158 | + | CA264_04925 | 0.42 | +0.1 | |
1,143,158 | + | CA264_04925 | 0.42 | +0.3 | |
1,143,161 | + | CA264_04925 | 0.43 | -0.1 | |
1,143,162 | - | CA264_04925 | 0.43 | -0.5 | |
1,143,192 | - | CA264_04925 | 0.46 | +0.5 | |
1,143,211 | - | CA264_04925 | 0.47 | -0.4 | |
1,143,261 | + | CA264_04925 | 0.52 | +0.9 |
Or see this region's nucleotide sequence