Experiment: m.b. Tetracycline 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03665 and CA264_03670 are separated by 95 nucleotides CA264_03670 and CA264_03675 are separated by 346 nucleotides
CA264_03665: CA264_03665 - FUSC family protein, at 856,405 to 857,457
_03665
CA264_03670: CA264_03670 - polyisoprenoid-binding protein, at 857,553 to 858,086
_03670
CA264_03675: CA264_03675 - hypothetical protein, at 858,433 to 859,383
_03675
Position (kb) 857
858
859 Strain fitness (log2 ratio) -2
-1
0
1
2 at 856.561 kb on + strand, within CA264_03665 at 856.561 kb on + strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.693 kb on + strand, within CA264_03665 at 856.720 kb on + strand, within CA264_03665 at 856.721 kb on - strand, within CA264_03665 at 856.721 kb on - strand, within CA264_03665 at 856.723 kb on + strand, within CA264_03665 at 856.724 kb on - strand, within CA264_03665 at 856.729 kb on - strand, within CA264_03665 at 856.729 kb on - strand, within CA264_03665 at 856.869 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.874 kb on - strand, within CA264_03665 at 856.874 kb on - strand, within CA264_03665 at 856.939 kb on + strand, within CA264_03665 at 857.201 kb on + strand, within CA264_03665 at 857.202 kb on - strand, within CA264_03665 at 857.244 kb on + strand, within CA264_03665 at 857.251 kb on - strand, within CA264_03665 at 857.251 kb on - strand, within CA264_03665 at 857.258 kb on + strand, within CA264_03665 at 857.259 kb on - strand, within CA264_03665 at 857.402 kb on - strand at 857.402 kb on - strand at 857.455 kb on + strand at 857.456 kb on - strand at 857.481 kb on - strand at 857.536 kb on + strand at 857.538 kb on + strand at 857.538 kb on + strand at 857.566 kb on - strand at 857.746 kb on - strand, within CA264_03670 at 857.796 kb on - strand, within CA264_03670 at 857.840 kb on + strand, within CA264_03670 at 857.840 kb on + strand, within CA264_03670 at 857.926 kb on - strand, within CA264_03670 at 857.980 kb on - strand, within CA264_03670 at 858.063 kb on + strand at 858.063 kb on + strand at 858.064 kb on - strand at 858.086 kb on + strand at 858.086 kb on + strand at 858.086 kb on + strand at 858.090 kb on - strand at 858.090 kb on - strand at 858.115 kb on - strand at 858.158 kb on - strand at 858.158 kb on - strand at 858.190 kb on - strand at 858.229 kb on - strand at 858.250 kb on + strand at 858.278 kb on + strand at 858.472 kb on - strand at 858.499 kb on + strand at 858.499 kb on + strand at 858.499 kb on + strand at 858.499 kb on + strand at 858.502 kb on + strand at 858.504 kb on + strand at 858.505 kb on - strand at 858.505 kb on - strand at 858.550 kb on + strand, within CA264_03675 at 858.551 kb on - strand, within CA264_03675 at 858.551 kb on - strand, within CA264_03675 at 858.551 kb on - strand, within CA264_03675 at 858.553 kb on - strand, within CA264_03675 at 858.566 kb on - strand, within CA264_03675 at 858.740 kb on + strand, within CA264_03675 at 858.740 kb on + strand, within CA264_03675 at 858.741 kb on - strand, within CA264_03675 at 858.741 kb on - strand, within CA264_03675 at 858.779 kb on - strand, within CA264_03675 at 858.779 kb on - strand, within CA264_03675 at 858.877 kb on + strand, within CA264_03675 at 858.900 kb on + strand, within CA264_03675
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.003 mg/ml remove 856,561 + CA264_03665 0.15 -1.7 856,561 + CA264_03665 0.15 +0.6 856,562 - CA264_03665 0.15 +0.3 856,562 - CA264_03665 0.15 +0.5 856,562 - CA264_03665 0.15 -0.8 856,599 - CA264_03665 0.18 +0.8 856,599 - CA264_03665 0.18 -0.0 856,599 - CA264_03665 0.18 -0.4 856,693 + CA264_03665 0.27 +0.2 856,720 + CA264_03665 0.30 +0.4 856,721 - CA264_03665 0.30 +0.5 856,721 - CA264_03665 0.30 -0.0 856,723 + CA264_03665 0.30 +1.6 856,724 - CA264_03665 0.30 -0.4 856,729 - CA264_03665 0.31 -1.1 856,729 - CA264_03665 0.31 -0.6 856,869 + CA264_03665 0.44 +0.0 856,873 + CA264_03665 0.44 -0.2 856,873 + CA264_03665 0.44 -1.6 856,873 + CA264_03665 0.44 +0.0 856,874 - CA264_03665 0.45 -0.7 856,874 - CA264_03665 0.45 -0.2 856,939 + CA264_03665 0.51 +1.8 857,201 + CA264_03665 0.76 +0.1 857,202 - CA264_03665 0.76 -0.2 857,244 + CA264_03665 0.80 +0.1 857,251 - CA264_03665 0.80 -0.8 857,251 - CA264_03665 0.80 -0.2 857,258 + CA264_03665 0.81 -2.4 857,259 - CA264_03665 0.81 +0.0 857,402 - +0.3 857,402 - +0.2 857,455 + +1.2 857,456 - +1.2 857,481 - +0.3 857,536 + +0.9 857,538 + -0.9 857,538 + -0.8 857,566 - +0.5 857,746 - CA264_03670 0.36 -0.3 857,796 - CA264_03670 0.46 -0.8 857,840 + CA264_03670 0.54 +1.8 857,840 + CA264_03670 0.54 -0.2 857,926 - CA264_03670 0.70 +0.0 857,980 - CA264_03670 0.80 -0.1 858,063 + -0.0 858,063 + +0.5 858,064 - -0.8 858,086 + -1.0 858,086 + -0.1 858,086 + +1.4 858,090 - -2.1 858,090 - -0.7 858,115 - +0.5 858,158 - -0.0 858,158 - -0.4 858,190 - +0.0 858,229 - +1.0 858,250 + +0.5 858,278 + -0.1 858,472 - +1.4 858,499 + -0.1 858,499 + -0.5 858,499 + +0.6 858,499 + -1.7 858,502 + -0.3 858,504 + +0.2 858,505 - +0.1 858,505 - +1.9 858,550 + CA264_03675 0.12 -0.3 858,551 - CA264_03675 0.12 +0.9 858,551 - CA264_03675 0.12 +0.1 858,551 - CA264_03675 0.12 -0.4 858,553 - CA264_03675 0.13 +0.2 858,566 - CA264_03675 0.14 +2.6 858,740 + CA264_03675 0.32 +1.5 858,740 + CA264_03675 0.32 -1.1 858,741 - CA264_03675 0.32 +0.4 858,741 - CA264_03675 0.32 +1.4 858,779 - CA264_03675 0.36 +0.1 858,779 - CA264_03675 0.36 -0.2 858,877 + CA264_03675 0.47 -0.1 858,900 + CA264_03675 0.49 -0.8
Or see this region's nucleotide sequence