Experiment: m.b. Tetracycline 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00600 and CA264_00605 are separated by 251 nucleotides CA264_00605 and CA264_00610 are separated by 80 nucleotides CA264_00610 and CA264_00615 are separated by 209 nucleotides
CA264_00600: CA264_00600 - phosphoribosylformylglycinamidine synthase II, at 131,675 to 133,891
_00600
CA264_00605: CA264_00605 - hypothetical protein, at 134,143 to 134,367
_00605
CA264_00610: CA264_00610 - hypothetical protein, at 134,448 to 134,939
_00610
CA264_00615: CA264_00615 - F0F1 ATP synthase subunit beta, at 135,149 to 136,660
_00615
Position (kb) 134
135 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 133.173 kb on - strand, within CA264_00600 at 133.273 kb on + strand, within CA264_00600 at 133.296 kb on + strand, within CA264_00600 at 133.296 kb on + strand, within CA264_00600 at 133.296 kb on + strand, within CA264_00600 at 133.297 kb on - strand, within CA264_00600 at 133.371 kb on + strand, within CA264_00600 at 133.371 kb on + strand, within CA264_00600 at 133.371 kb on + strand, within CA264_00600 at 133.538 kb on - strand, within CA264_00600 at 133.625 kb on - strand, within CA264_00600 at 133.809 kb on - strand at 133.874 kb on - strand at 133.896 kb on - strand at 133.905 kb on - strand at 133.908 kb on + strand at 133.908 kb on + strand at 133.909 kb on - strand at 133.933 kb on + strand at 133.933 kb on + strand at 133.933 kb on + strand at 133.934 kb on - strand at 133.934 kb on - strand at 133.934 kb on - strand at 133.934 kb on - strand at 133.935 kb on + strand at 133.936 kb on - strand at 133.938 kb on + strand at 133.941 kb on - strand at 133.951 kb on + strand at 134.033 kb on - strand at 134.054 kb on - strand at 134.068 kb on - strand at 134.069 kb on + strand at 134.070 kb on - strand at 134.075 kb on + strand at 134.098 kb on + strand at 134.124 kb on - strand at 134.143 kb on - strand at 134.153 kb on + strand at 134.153 kb on + strand at 134.175 kb on + strand, within CA264_00605 at 134.216 kb on + strand, within CA264_00605 at 134.217 kb on - strand, within CA264_00605 at 134.219 kb on + strand, within CA264_00605 at 134.219 kb on + strand, within CA264_00605 at 134.220 kb on - strand, within CA264_00605 at 134.242 kb on - strand, within CA264_00605 at 134.262 kb on + strand, within CA264_00605 at 134.262 kb on + strand, within CA264_00605 at 134.311 kb on - strand, within CA264_00605 at 134.320 kb on + strand, within CA264_00605 at 134.321 kb on - strand, within CA264_00605 at 134.321 kb on - strand, within CA264_00605 at 134.363 kb on + strand at 134.364 kb on - strand at 134.364 kb on - strand at 134.414 kb on + strand at 134.414 kb on + strand at 134.421 kb on + strand at 134.435 kb on - strand at 134.442 kb on - strand at 134.447 kb on + strand at 134.448 kb on - strand at 134.455 kb on - strand at 134.461 kb on - strand at 134.691 kb on + strand, within CA264_00610 at 134.759 kb on - strand, within CA264_00610 at 134.793 kb on + strand, within CA264_00610 at 134.794 kb on - strand, within CA264_00610 at 134.843 kb on + strand, within CA264_00610 at 134.887 kb on + strand, within CA264_00610 at 134.888 kb on - strand, within CA264_00610 at 134.938 kb on - strand at 134.991 kb on - strand at 135.066 kb on + strand at 135.075 kb on + strand at 135.075 kb on + strand at 135.075 kb on + strand at 135.077 kb on + strand at 135.122 kb on + strand at 135.122 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.003 mg/ml remove 133,173 - CA264_00600 0.68 -1.9 133,273 + CA264_00600 0.72 -0.2 133,296 + CA264_00600 0.73 -0.6 133,296 + CA264_00600 0.73 +0.8 133,296 + CA264_00600 0.73 +0.3 133,297 - CA264_00600 0.73 +0.4 133,371 + CA264_00600 0.76 -0.3 133,371 + CA264_00600 0.76 +0.2 133,371 + CA264_00600 0.76 -0.1 133,538 - CA264_00600 0.84 -0.0 133,625 - CA264_00600 0.88 -0.5 133,809 - -0.6 133,874 - +1.2 133,896 - +0.6 133,905 - +0.5 133,908 + +0.8 133,908 + +0.8 133,909 - +0.2 133,933 + +1.1 133,933 + +0.1 133,933 + +0.0 133,934 - +0.2 133,934 - +2.1 133,934 - +0.2 133,934 - -1.5 133,935 + +0.8 133,936 - +0.1 133,938 + -0.1 133,941 - -0.3 133,951 + -0.4 134,033 - -1.2 134,054 - -0.2 134,068 - +0.8 134,069 + +0.3 134,070 - -1.2 134,075 + -0.4 134,098 + -0.0 134,124 - -0.0 134,143 - +0.0 134,153 + +0.0 134,153 + +0.4 134,175 + CA264_00605 0.14 -0.5 134,216 + CA264_00605 0.32 -0.7 134,217 - CA264_00605 0.33 +1.8 134,219 + CA264_00605 0.34 +0.6 134,219 + CA264_00605 0.34 -0.8 134,220 - CA264_00605 0.34 -0.7 134,242 - CA264_00605 0.44 -0.7 134,262 + CA264_00605 0.53 -0.6 134,262 + CA264_00605 0.53 -0.2 134,311 - CA264_00605 0.75 -1.0 134,320 + CA264_00605 0.79 -0.5 134,321 - CA264_00605 0.79 +0.8 134,321 - CA264_00605 0.79 +1.4 134,363 + -0.0 134,364 - +0.1 134,364 - -0.2 134,414 + +0.0 134,414 + -0.8 134,421 + +1.1 134,435 - -0.6 134,442 - +0.1 134,447 + -0.5 134,448 - +0.5 134,455 - -0.7 134,461 - +0.2 134,691 + CA264_00610 0.49 -0.2 134,759 - CA264_00610 0.63 -0.4 134,793 + CA264_00610 0.70 -0.4 134,794 - CA264_00610 0.70 +0.2 134,843 + CA264_00610 0.80 +0.4 134,887 + CA264_00610 0.89 +0.8 134,888 - CA264_00610 0.89 -1.2 134,938 - +0.6 134,991 - +2.8 135,066 + -0.5 135,075 + -0.8 135,075 + -0.6 135,075 + -0.8 135,077 + -0.3 135,122 + +0.2 135,122 + +0.3
Or see this region's nucleotide sequence