Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4992

Experiment: L-Phenylalanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine (C)
5,569,764	+		PfGW456L13_4991	0.12	+0.9
5,569,765	-		PfGW456L13_4991	0.12	-0.8
5,569,904	+		PfGW456L13_4991	0.27	-0.0
5,569,916	+		PfGW456L13_4991	0.29	+1.6
5,569,967	+		PfGW456L13_4991	0.34	-0.3
5,569,967	+		PfGW456L13_4991	0.34	-1.1
5,569,967	+		PfGW456L13_4991	0.34	+1.3
5,569,967	+		PfGW456L13_4991	0.34	+1.7
5,569,968	-		PfGW456L13_4991	0.35	+0.6
5,569,968	-		PfGW456L13_4991	0.35	+0.0
5,569,968	-		PfGW456L13_4991	0.35	-0.9
5,569,968	-		PfGW456L13_4991	0.35	+0.2
5,569,968	-		PfGW456L13_4991	0.35	+0.2
5,569,968	-		PfGW456L13_4991	0.35	-0.3
5,569,968	-		PfGW456L13_4991	0.35	+0.3
5,569,968	-		PfGW456L13_4991	0.35	+1.1
5,569,975	-		PfGW456L13_4991	0.35	-0.1
5,569,975	-		PfGW456L13_4991	0.35	-0.7
5,570,249	+		PfGW456L13_4991	0.66	+0.3
5,570,339	+		PfGW456L13_4991	0.75	+0.4
5,570,448	-		PfGW456L13_4991	0.88	+0.1
5,570,465	+		PfGW456L13_4991	0.89	+0.3
5,570,661	-				-0.2
5,570,680	+				-0.1
5,570,690	-				-0.0
5,570,690	-				+0.3
5,570,690	-				+0.1
5,570,745	+				-0.6
5,570,745	+				+0.1
5,570,745	+				+0.7
5,570,746	-				-0.5
5,570,876	-				-1.9
5,570,943	+		PfGW456L13_4992	0.10	-1.1
5,570,943	+		PfGW456L13_4992	0.10	-1.8
5,570,943	+		PfGW456L13_4992	0.10	-2.8
5,570,944	-		PfGW456L13_4992	0.11	-2.2
5,570,944	-		PfGW456L13_4992	0.11	-0.6
5,570,944	-		PfGW456L13_4992	0.11	-1.0
5,570,944	-		PfGW456L13_4992	0.11	-1.9
5,571,299	+		PfGW456L13_4992	0.29	-2.2
5,571,299	+		PfGW456L13_4992	0.29	-1.8
5,571,299	+		PfGW456L13_4992	0.29	-1.5
5,571,299	+		PfGW456L13_4992	0.29	-2.7
5,571,300	-		PfGW456L13_4992	0.29	-0.8
5,571,300	-		PfGW456L13_4992	0.29	-2.8
5,571,332	+		PfGW456L13_4992	0.31	-2.3
5,571,333	-		PfGW456L13_4992	0.31	-2.3
5,571,333	-				+0.2
5,571,561	+		PfGW456L13_4992	0.43	-0.9
5,571,561	+		PfGW456L13_4992	0.43	-0.6
5,571,561	+		PfGW456L13_4992	0.43	-2.6
5,571,561	+		PfGW456L13_4992	0.43	-4.0
5,571,562	-		PfGW456L13_4992	0.43	-2.1
5,571,562	-		PfGW456L13_4992	0.43	-1.0
5,571,562	-		PfGW456L13_4992	0.43	-2.3
5,571,562	-		PfGW456L13_4992	0.43	-1.9
5,571,585	+		PfGW456L13_4992	0.44	-1.7
5,571,585	+		PfGW456L13_4992	0.44	-3.2
5,571,585	+		PfGW456L13_4992	0.44	-0.8
5,571,585	+		PfGW456L13_4992	0.44	-1.1
5,571,586	-		PfGW456L13_4992	0.44	-1.7
5,571,586	-		PfGW456L13_4992	0.44	-2.9
5,571,586	-		PfGW456L13_4992	0.44	-0.9
5,571,586	-		PfGW456L13_4992	0.44	-1.9
5,571,586	-		PfGW456L13_4992	0.44	-2.5
5,571,674	+		PfGW456L13_4992	0.49	-2.9
5,571,674	+		PfGW456L13_4992	0.49	-1.5
5,571,674	+		PfGW456L13_4992	0.49	-0.9
5,571,674	+		PfGW456L13_4992	0.49	-1.5
5,571,674	+		PfGW456L13_4992	0.49	-0.6
5,571,675	-		PfGW456L13_4992	0.49	-0.6
5,571,675	-		PfGW456L13_4992	0.49	-2.6
5,571,675	-		PfGW456L13_4992	0.49	-3.0
5,571,675	-		PfGW456L13_4992	0.49	-3.8
5,571,675	-		PfGW456L13_4992	0.49	-1.7
5,571,675	-		PfGW456L13_4992	0.49	-0.5
5,571,675	-		PfGW456L13_4992	0.49	-2.3
5,571,675	-		PfGW456L13_4992	0.49	-1.5
5,571,675	-		PfGW456L13_4992	0.49	-2.4
5,571,697	+		PfGW456L13_4992	0.50	-0.5
5,571,894	+		PfGW456L13_4992	0.61	-2.1
5,571,894	+		PfGW456L13_4992	0.61	-1.0
5,571,894	+		PfGW456L13_4992	0.61	-1.9
5,571,894	+		PfGW456L13_4992	0.61	-1.5
5,571,982	-		PfGW456L13_4992	0.65	-3.4
5,572,092	+		PfGW456L13_4992	0.71	-0.2
5,572,092	+		PfGW456L13_4992	0.71	-2.9
5,572,092	+		PfGW456L13_4992	0.71	-2.2
5,572,093	-		PfGW456L13_4992	0.71	-0.5
5,572,093	-		PfGW456L13_4992	0.71	-2.0
5,572,093	-		PfGW456L13_4992	0.71	-0.2
5,572,163	+		PfGW456L13_4992	0.75	-2.3
5,572,163	+		PfGW456L13_4992	0.75	-1.7
5,572,163	+		PfGW456L13_4992	0.75	-1.4
5,572,163	+		PfGW456L13_4992	0.75	-0.8
5,572,164	-		PfGW456L13_4992	0.75	-2.0
5,572,164	-		PfGW456L13_4992	0.75	-2.0
5,572,164	-		PfGW456L13_4992	0.75	-2.0
5,572,164	-		PfGW456L13_4992	0.75	-1.7
5,572,293	+		PfGW456L13_4992	0.82	-2.8
5,572,293	+		PfGW456L13_4992	0.82	-0.2
5,572,293	+		PfGW456L13_4992	0.82	-1.7
5,572,293	+		PfGW456L13_4992	0.82	-2.5
5,572,293	+		PfGW456L13_4992	0.82	-2.6
5,572,294	-		PfGW456L13_4992	0.82	+0.2
5,572,294	-		PfGW456L13_4992	0.82	-2.2
5,572,294	-		PfGW456L13_4992	0.82	-2.3
5,572,294	-		PfGW456L13_4992	0.82	-0.3
5,572,350	+		PfGW456L13_4992	0.85	+0.2
5,572,350	+		PfGW456L13_4992	0.85	-0.9
5,572,488	+				-1.6
5,572,488	+				-0.8
5,572,489	-				-4.2
5,572,489	-				-1.2
5,572,489	-				-2.8
5,572,489	-				-2.0
5,572,579	+				-3.0
5,572,579	+				-2.5
5,572,579	+				-2.0
5,572,579	+				+0.7
5,572,580	-				-1.5
5,572,599	+				-0.8
5,572,653	+				-1.7
5,572,660	-				-2.1
5,572,660	-				-2.8
5,572,660	-				-2.4
5,572,947	+		PfGW456L13_4993	0.32	-2.1
5,572,947	+		PfGW456L13_4993	0.32	-0.6
5,572,948	-		PfGW456L13_4993	0.32	-1.9
5,572,948	-		PfGW456L13_4993	0.32	-1.0
5,572,977	+		PfGW456L13_4993	0.35	-2.3
5,572,977	+		PfGW456L13_4993	0.35	-2.9
5,572,977	+		PfGW456L13_4993	0.35	-0.9
5,572,977	+		PfGW456L13_4993	0.35	-1.3
5,572,977	+		PfGW456L13_4993	0.35	-0.8
5,572,978	-		PfGW456L13_4993	0.36	-1.8
5,572,978	-		PfGW456L13_4993	0.36	-0.1
5,572,978	-		PfGW456L13_4993	0.36	-2.2
5,572,978	-		PfGW456L13_4993	0.36	-1.9
5,572,978	-		PfGW456L13_4993	0.36	-3.1
5,572,978	-		PfGW456L13_4993	0.36	-1.9
5,572,978	-		PfGW456L13_4993	0.36	-5.1
5,572,978	-		PfGW456L13_4993	0.36	-1.1
5,572,978	-		PfGW456L13_4993	0.36	-3.0
5,572,983	+		PfGW456L13_4993	0.36	-1.9
5,572,983	+		PfGW456L13_4993	0.36	-3.1
5,572,983	+		PfGW456L13_4993	0.36	-1.0
5,572,983	+		PfGW456L13_4993	0.36	-2.2
5,572,983	+		PfGW456L13_4993	0.36	-0.2
5,572,984	-		PfGW456L13_4993	0.36	-2.2
5,572,984	-		PfGW456L13_4993	0.36	-0.9
5,572,984	-		PfGW456L13_4993	0.36	-2.3
5,572,984	-		PfGW456L13_4993	0.36	-4.0
5,572,984	-		PfGW456L13_4993	0.36	-0.5
5,572,984	-		PfGW456L13_4993	0.36	-1.4
5,572,984	-		PfGW456L13_4993	0.36	-0.5
5,572,984	-		PfGW456L13_4993	0.36	-0.9
5,573,061	+				-0.3
5,573,127	+		PfGW456L13_4993	0.52	-2.2
5,573,127	+		PfGW456L13_4993	0.52	-1.4
5,573,127	+		PfGW456L13_4993	0.52	-1.6
5,573,196	+		PfGW456L13_4993	0.59	-2.3
5,573,196	+		PfGW456L13_4993	0.59	-3.3
5,573,196	+		PfGW456L13_4993	0.59	-1.8
5,573,196	+		PfGW456L13_4993	0.59	-1.1
5,573,197	-		PfGW456L13_4993	0.59	-0.5
5,573,197	-		PfGW456L13_4993	0.59	-2.1
5,573,197	-		PfGW456L13_4993	0.59	-1.1
5,573,197	-		PfGW456L13_4993	0.59	-1.5
5,573,197	-		PfGW456L13_4993	0.59	-2.5
5,573,197	-		PfGW456L13_4993	0.59	-2.2
5,573,197	-		PfGW456L13_4993	0.59	-1.0
5,573,355	+		PfGW456L13_4993	0.77	-1.8
5,573,355	+		PfGW456L13_4993	0.77	-1.4
5,573,355	+		PfGW456L13_4993	0.77	-1.6
5,573,355	+		PfGW456L13_4993	0.77	-2.3
5,573,356	-		PfGW456L13_4993	0.77	-2.2
5,573,356	-		PfGW456L13_4993	0.77	-2.4
5,573,356	-		PfGW456L13_4993	0.77	-2.3
5,573,356	-		PfGW456L13_4993	0.77	-0.8
5,573,356	-		PfGW456L13_4993	0.77	-2.0
5,573,462	-		PfGW456L13_4993	0.88	-1.9
5,573,472	+		PfGW456L13_4993	0.89	-2.5
5,573,472	+		PfGW456L13_4993	0.89	-1.8
5,573,472	+		PfGW456L13_4993	0.89	-3.7
5,573,473	-		PfGW456L13_4993	0.89	-1.9
5,573,591	+		PfGW456L13_4994	0.19	-0.4
5,573,591	+		PfGW456L13_4994	0.19	-0.6
5,573,592	-		PfGW456L13_4994	0.20	+0.6
5,573,628	+		PfGW456L13_4994	0.36	-0.2
5,573,628	+		PfGW456L13_4994	0.36	-1.5
5,573,628	+		PfGW456L13_4994	0.36	-3.1
5,573,628	+		PfGW456L13_4994	0.36	-1.6
5,573,628	+		PfGW456L13_4994	0.36	-2.8
5,573,628	+		PfGW456L13_4994	0.36	-1.3
5,573,629	-		PfGW456L13_4994	0.37	+1.1
5,573,629	-		PfGW456L13_4994	0.37	-0.6
5,573,629	-		PfGW456L13_4994	0.37	+0.1
5,573,629	-		PfGW456L13_4994	0.37	-0.0
5,573,629	-		PfGW456L13_4994	0.37	-0.8