Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4232 and PfGW456L13_4233 are separated by 52 nucleotides PfGW456L13_4233 and PfGW456L13_4234 are separated by 173 nucleotides PfGW456L13_4234 and PfGW456L13_4235 are separated by 2 nucleotides PfGW456L13_4235 and PfGW456L13_4236 overlap by 4 nucleotides
PfGW456L13_4232 - Permeases of the major facilitator superfamily, at 4,746,806 to 4,748,014
_4232
PfGW456L13_4233 - Transcriptional regulator, MarR family, at 4,748,067 to 4,748,471
_4233
PfGW456L13_4234 - Cobalamin synthase, at 4,748,645 to 4,749,376
_4234
PfGW456L13_4235 - Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73), at 4,749,379 to 4,749,954
_4235
PfGW456L13_4236 - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21), at 4,749,951 to 4,751,006
_4236
Position (kb)
4748
4749
4750 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4747.669 kb on + strand, within PfGW456L13_4232 at 4747.670 kb on - strand, within PfGW456L13_4232 at 4747.997 kb on - strand at 4747.997 kb on - strand at 4747.997 kb on - strand at 4747.997 kb on - strand at 4748.018 kb on + strand at 4748.019 kb on - strand at 4748.019 kb on - strand at 4748.037 kb on + strand at 4748.094 kb on + strand at 4748.407 kb on + strand, within PfGW456L13_4233 at 4748.407 kb on + strand, within PfGW456L13_4233 at 4748.451 kb on + strand at 4748.451 kb on + strand at 4748.451 kb on + strand at 4748.452 kb on - strand at 4748.452 kb on - strand at 4748.480 kb on + strand at 4748.480 kb on + strand at 4748.481 kb on - strand at 4748.481 kb on - strand at 4748.482 kb on + strand at 4748.483 kb on - strand at 4748.485 kb on - strand at 4748.663 kb on + strand at 4748.664 kb on - strand at 4748.664 kb on - strand at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.908 kb on - strand, within PfGW456L13_4234 at 4748.915 kb on - strand, within PfGW456L13_4234 at 4749.016 kb on + strand, within PfGW456L13_4234 at 4749.017 kb on - strand, within PfGW456L13_4234 at 4749.260 kb on + strand, within PfGW456L13_4234 at 4749.276 kb on + strand, within PfGW456L13_4234 at 4749.276 kb on + strand, within PfGW456L13_4234 at 4749.277 kb on - strand, within PfGW456L13_4234 at 4749.630 kb on - strand, within PfGW456L13_4235 at 4750.259 kb on - strand, within PfGW456L13_4236
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 4,747,669 + PfGW456L13_4232 0.71 +0.2 4,747,670 - PfGW456L13_4232 0.71 +0.5 4,747,997 - +1.5 4,747,997 - +0.4 4,747,997 - +0.5 4,747,997 - +1.2 4,748,018 + +0.5 4,748,019 - -0.4 4,748,019 - +0.9 4,748,037 + +0.7 4,748,094 + +0.1 4,748,407 + PfGW456L13_4233 0.84 -1.6 4,748,407 + PfGW456L13_4233 0.84 -0.6 4,748,451 + +0.3 4,748,451 + -1.9 4,748,451 + +0.2 4,748,452 - -0.1 4,748,452 - -0.4 4,748,480 + -0.5 4,748,480 + +0.5 4,748,481 - +0.6 4,748,481 - -0.5 4,748,482 + +0.4 4,748,483 - +0.5 4,748,485 - -0.1 4,748,663 + +0.7 4,748,664 - +1.4 4,748,664 - -1.6 4,748,907 + PfGW456L13_4234 0.36 -0.1 4,748,907 + PfGW456L13_4234 0.36 +0.4 4,748,907 + PfGW456L13_4234 0.36 +0.5 4,748,907 + PfGW456L13_4234 0.36 +0.3 4,748,907 + PfGW456L13_4234 0.36 +0.9 4,748,907 + PfGW456L13_4234 0.36 +2.1 4,748,907 + PfGW456L13_4234 0.36 +2.9 4,748,908 - PfGW456L13_4234 0.36 +0.1 4,748,915 - PfGW456L13_4234 0.37 -1.0 4,749,016 + PfGW456L13_4234 0.51 +1.3 4,749,017 - PfGW456L13_4234 0.51 +0.6 4,749,260 + PfGW456L13_4234 0.84 +0.5 4,749,276 + PfGW456L13_4234 0.86 +0.3 4,749,276 + PfGW456L13_4234 0.86 +0.5 4,749,277 - PfGW456L13_4234 0.86 +0.2 4,749,630 - PfGW456L13_4235 0.44 +0.5 4,750,259 - PfGW456L13_4236 0.29 -0.2
Or see this region's nucleotide sequence