Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3387 and PfGW456L13_3388 are separated by 42 nucleotides PfGW456L13_3388 and PfGW456L13_3389 overlap by 4 nucleotides
PfGW456L13_3387 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2), at 3,803,999 to 3,805,123
_3387
PfGW456L13_3388 - Enoyl-CoA hydratase (EC 4.2.1.17), at 3,805,166 to 3,805,966
_3388
PfGW456L13_3389 - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2), at 3,805,963 to 3,807,036
_3389
Position (kb)
3805
3806 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3804.342 kb on + strand, within PfGW456L13_3387 at 3804.342 kb on + strand, within PfGW456L13_3387 at 3804.433 kb on - strand, within PfGW456L13_3387 at 3804.483 kb on - strand, within PfGW456L13_3387 at 3804.483 kb on - strand, within PfGW456L13_3387 at 3804.604 kb on + strand, within PfGW456L13_3387 at 3804.605 kb on - strand, within PfGW456L13_3387 at 3804.684 kb on + strand, within PfGW456L13_3387 at 3804.685 kb on - strand, within PfGW456L13_3387 at 3804.685 kb on - strand, within PfGW456L13_3387 at 3804.685 kb on - strand, within PfGW456L13_3387 at 3804.685 kb on - strand, within PfGW456L13_3387 at 3804.837 kb on + strand, within PfGW456L13_3387 at 3804.837 kb on + strand, within PfGW456L13_3387 at 3804.838 kb on - strand, within PfGW456L13_3387 at 3804.838 kb on - strand, within PfGW456L13_3387 at 3805.044 kb on + strand at 3805.045 kb on - strand at 3805.112 kb on + strand at 3805.113 kb on - strand at 3805.164 kb on - strand at 3805.164 kb on - strand at 3805.291 kb on + strand, within PfGW456L13_3388 at 3805.291 kb on + strand, within PfGW456L13_3388 at 3805.291 kb on + strand, within PfGW456L13_3388 at 3805.292 kb on - strand, within PfGW456L13_3388 at 3805.292 kb on - strand, within PfGW456L13_3388 at 3805.292 kb on - strand, within PfGW456L13_3388 at 3805.292 kb on - strand, within PfGW456L13_3388 at 3805.292 kb on - strand, within PfGW456L13_3388 at 3805.292 kb on - strand, within PfGW456L13_3388 at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.445 kb on + strand at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.445 kb on + strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.446 kb on - strand, within PfGW456L13_3388 at 3805.668 kb on + strand, within PfGW456L13_3388 at 3805.669 kb on - strand, within PfGW456L13_3388 at 3805.669 kb on - strand, within PfGW456L13_3388 at 3805.684 kb on + strand, within PfGW456L13_3388 at 3805.685 kb on - strand, within PfGW456L13_3388 at 3805.704 kb on + strand, within PfGW456L13_3388 at 3805.705 kb on - strand, within PfGW456L13_3388 at 3805.705 kb on - strand, within PfGW456L13_3388 at 3805.705 kb on - strand, within PfGW456L13_3388 at 3805.708 kb on + strand, within PfGW456L13_3388 at 3805.709 kb on - strand, within PfGW456L13_3388 at 3805.723 kb on - strand, within PfGW456L13_3388 at 3805.838 kb on + strand, within PfGW456L13_3388 at 3805.838 kb on + strand, within PfGW456L13_3388 at 3805.838 kb on + strand, within PfGW456L13_3388 at 3806.027 kb on + strand at 3806.388 kb on - strand at 3806.388 kb on - strand, within PfGW456L13_3389 at 3806.407 kb on + strand, within PfGW456L13_3389 at 3806.510 kb on - strand, within PfGW456L13_3389 at 3806.589 kb on + strand, within PfGW456L13_3389 at 3806.679 kb on - strand, within PfGW456L13_3389 at 3806.849 kb on + strand, within PfGW456L13_3389 at 3806.849 kb on + strand, within PfGW456L13_3389 at 3806.849 kb on + strand, within PfGW456L13_3389 at 3806.849 kb on + strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.850 kb on - strand, within PfGW456L13_3389 at 3806.853 kb on + strand, within PfGW456L13_3389 at 3806.853 kb on + strand, within PfGW456L13_3389 at 3806.853 kb on + strand, within PfGW456L13_3389 at 3806.853 kb on + strand, within PfGW456L13_3389 at 3806.853 kb on + strand, within PfGW456L13_3389 at 3806.854 kb on - strand, within PfGW456L13_3389 at 3806.854 kb on - strand, within PfGW456L13_3389 at 3806.854 kb on - strand, within PfGW456L13_3389 at 3806.854 kb on - strand, within PfGW456L13_3389 at 3806.854 kb on - strand, within PfGW456L13_3389 at 3806.854 kb on - strand, within PfGW456L13_3389 at 3806.936 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 3,804,342 + PfGW456L13_3387 0.30 +0.2 3,804,342 + PfGW456L13_3387 0.30 -2.2 3,804,433 - PfGW456L13_3387 0.39 +0.2 3,804,483 - PfGW456L13_3387 0.43 -0.2 3,804,483 - PfGW456L13_3387 0.43 -0.4 3,804,604 + PfGW456L13_3387 0.54 -1.4 3,804,605 - PfGW456L13_3387 0.54 -1.7 3,804,684 + PfGW456L13_3387 0.61 -0.3 3,804,685 - PfGW456L13_3387 0.61 +0.6 3,804,685 - PfGW456L13_3387 0.61 -1.6 3,804,685 - PfGW456L13_3387 0.61 -0.1 3,804,685 - PfGW456L13_3387 0.61 +1.8 3,804,837 + PfGW456L13_3387 0.74 -0.5 3,804,837 + PfGW456L13_3387 0.74 -0.3 3,804,838 - PfGW456L13_3387 0.75 +0.8 3,804,838 - PfGW456L13_3387 0.75 -0.9 3,805,044 + -0.1 3,805,045 - +0.4 3,805,112 + -0.8 3,805,113 - +0.5 3,805,164 - -0.2 3,805,164 - -0.4 3,805,291 + PfGW456L13_3388 0.16 -1.2 3,805,291 + PfGW456L13_3388 0.16 +0.3 3,805,291 + PfGW456L13_3388 0.16 -0.0 3,805,292 - PfGW456L13_3388 0.16 -0.5 3,805,292 - PfGW456L13_3388 0.16 +0.2 3,805,292 - PfGW456L13_3388 0.16 -0.1 3,805,292 - PfGW456L13_3388 0.16 +0.1 3,805,292 - PfGW456L13_3388 0.16 +1.7 3,805,292 - PfGW456L13_3388 0.16 -0.9 3,805,445 + PfGW456L13_3388 0.35 -0.8 3,805,445 + PfGW456L13_3388 0.35 +1.0 3,805,445 + PfGW456L13_3388 0.35 -1.1 3,805,445 + +0.7 3,805,445 + PfGW456L13_3388 0.35 -1.0 3,805,445 + PfGW456L13_3388 0.35 +0.3 3,805,445 + PfGW456L13_3388 0.35 +0.0 3,805,445 + PfGW456L13_3388 0.35 +1.5 3,805,445 + PfGW456L13_3388 0.35 -0.5 3,805,445 + PfGW456L13_3388 0.35 +0.3 3,805,446 - PfGW456L13_3388 0.35 +0.3 3,805,446 - PfGW456L13_3388 0.35 -1.4 3,805,446 - PfGW456L13_3388 0.35 -0.6 3,805,446 - PfGW456L13_3388 0.35 +0.7 3,805,446 - PfGW456L13_3388 0.35 -0.1 3,805,446 - PfGW456L13_3388 0.35 -1.0 3,805,446 - PfGW456L13_3388 0.35 +0.9 3,805,446 - PfGW456L13_3388 0.35 +1.2 3,805,446 - PfGW456L13_3388 0.35 +1.7 3,805,446 - PfGW456L13_3388 0.35 -0.8 3,805,668 + PfGW456L13_3388 0.63 -0.8 3,805,669 - PfGW456L13_3388 0.63 -1.6 3,805,669 - PfGW456L13_3388 0.63 +0.4 3,805,684 + PfGW456L13_3388 0.65 +0.1 3,805,685 - PfGW456L13_3388 0.65 -0.5 3,805,704 + PfGW456L13_3388 0.67 +0.7 3,805,705 - PfGW456L13_3388 0.67 -1.3 3,805,705 - PfGW456L13_3388 0.67 +0.5 3,805,705 - PfGW456L13_3388 0.67 +0.0 3,805,708 + PfGW456L13_3388 0.68 -0.2 3,805,709 - PfGW456L13_3388 0.68 -0.0 3,805,723 - PfGW456L13_3388 0.70 +0.1 3,805,838 + PfGW456L13_3388 0.84 -0.9 3,805,838 + PfGW456L13_3388 0.84 +0.4 3,805,838 + PfGW456L13_3388 0.84 -0.6 3,806,027 + +1.0 3,806,388 - -0.9 3,806,388 - PfGW456L13_3389 0.40 +0.4 3,806,407 + PfGW456L13_3389 0.41 -0.1 3,806,510 - PfGW456L13_3389 0.51 +0.9 3,806,589 + PfGW456L13_3389 0.58 -0.4 3,806,679 - PfGW456L13_3389 0.67 -1.2 3,806,849 + PfGW456L13_3389 0.82 +0.1 3,806,849 + PfGW456L13_3389 0.82 -1.1 3,806,849 + PfGW456L13_3389 0.82 +0.1 3,806,849 + PfGW456L13_3389 0.82 +0.3 3,806,850 - PfGW456L13_3389 0.83 -0.9 3,806,850 - PfGW456L13_3389 0.83 -0.4 3,806,850 - PfGW456L13_3389 0.83 -0.4 3,806,850 - PfGW456L13_3389 0.83 +0.5 3,806,850 - PfGW456L13_3389 0.83 -0.3 3,806,850 - PfGW456L13_3389 0.83 -0.5 3,806,850 - +0.4 3,806,850 - PfGW456L13_3389 0.83 -0.9 3,806,850 - PfGW456L13_3389 0.83 -0.1 3,806,850 - PfGW456L13_3389 0.83 -0.5 3,806,850 - PfGW456L13_3389 0.83 -0.3 3,806,850 - +0.7 3,806,850 - PfGW456L13_3389 0.83 -0.5 3,806,850 - PfGW456L13_3389 0.83 +0.6 3,806,850 - +0.1 3,806,850 - PfGW456L13_3389 0.83 -0.3 3,806,850 - PfGW456L13_3389 0.83 -0.2 3,806,850 - PfGW456L13_3389 0.83 +0.5 3,806,850 - PfGW456L13_3389 0.83 -0.4 3,806,850 - PfGW456L13_3389 0.83 +0.7 3,806,850 - PfGW456L13_3389 0.83 -0.1 3,806,850 - PfGW456L13_3389 0.83 +0.1 3,806,850 - PfGW456L13_3389 0.83 +1.2 3,806,850 - PfGW456L13_3389 0.83 +1.0 3,806,850 - PfGW456L13_3389 0.83 -0.2 3,806,853 + PfGW456L13_3389 0.83 +0.9 3,806,853 + PfGW456L13_3389 0.83 +0.0 3,806,853 + PfGW456L13_3389 0.83 -2.0 3,806,853 + PfGW456L13_3389 0.83 -3.1 3,806,853 + PfGW456L13_3389 0.83 -1.1 3,806,854 - PfGW456L13_3389 0.83 +0.2 3,806,854 - PfGW456L13_3389 0.83 -0.4 3,806,854 - PfGW456L13_3389 0.83 -0.6 3,806,854 - PfGW456L13_3389 0.83 -0.7 3,806,854 - PfGW456L13_3389 0.83 +0.8 3,806,854 - PfGW456L13_3389 0.83 +0.8 3,806,936 - +0.8
Or see this region's nucleotide sequence